BLASTX 7.6.2
Query= UN61488 /QuerySize=411
(410 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G27950.1 | Symbols: CRF4 | CRF4 (CYTOKININ RES... 124 2e-029
TAIR9_protein||AT5G53290.1 | Symbols: CRF3 | CRF3 (CYTOKININ RES... 97 2e-021
TAIR9_protein||AT4G23750.1 | Symbols: CRF2 | CRF2 (CYTOKININ RES... 52 1e-007
TAIR9_protein||AT4G23750.2 | Symbols: CRF2 | CRF2 (CYTOKININ RES... 52 1e-007
>TAIR9_protein||AT4G27950.1 | Symbols: CRF4 | CRF4 (CYTOKININ RESPONSE FACTOR
4); DNA binding / transcription factor | chr4:13909732-13910739
REVERSE
Length = 336
Score = 124 bits (310), Expect = 2e-029
Identities = 66/85 (77%), Positives = 73/85 (85%), Gaps = 4/85 (4%)
Frame = +1
Query: 154 MMMDEYMDFRPVKYTEHKRVIKKYTKKLSVENKKKTSTVHDSARLVRVCVMDGDATDSSS 333
MMMDE+MD RPVKYTEHK VI+KYTKK S+E K ++V DSARLVRV + D DATDSSS
Sbjct: 1 MMMDEFMDLRPVKYTEHKTVIRKYTKKSSMERK---TSVRDSARLVRVSMTDRDATDSSS 57
Query: 334 DDDEEFLFPRRRVKRLINEIRVEPS 408
D+EEFLFPRRRVKRLINEIRVEPS
Sbjct: 58 -DEEEFLFPRRRVKRLINEIRVEPS 81
>TAIR9_protein||AT5G53290.1 | Symbols: CRF3 | CRF3 (CYTOKININ RESPONSE FACTOR
3); DNA binding / transcription factor | chr5:21617961-21619025
REVERSE
Length = 355
Score = 97 bits (241), Expect = 2e-021
Identities = 52/84 (61%), Positives = 61/84 (72%), Gaps = 6/84 (7%)
Frame = +1
Query: 160 MDEYMDFRPVKYTEHKRVIKKYTKKLSVENKKKTSTVHDSARLVRVCVMDGDATDSSSDD 339
MDEY+DFRP+KYTEHK + KYTKK S + + S + V +C D DATDSSSD+
Sbjct: 1 MDEYIDFRPLKYTEHKTSMTKYTKKSS-----EKLSGGKSLKKVSICYTDPDATDSSSDE 55
Query: 340 DEE-FLFPRRRVKRLINEIRVEPS 408
DEE FLFPRRRVKR +NEI VEPS
Sbjct: 56 DEEDFLFPRRRVKRFVNEITVEPS 79
>TAIR9_protein||AT4G23750.1 | Symbols: CRF2 | CRF2 (CYTOKININ RESPONSE FACTOR
2); DNA binding / transcription factor | chr4:12376751-12377782
FORWARD
Length = 344
Score = 52 bits (123), Expect = 1e-007
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 13/76 (17%)
Frame = +1
Query: 187 VKYTEHKRVIKKYTKKLSVENKKKTSTVHDSARLVRVCVMDGDATDSSSDDDEE----FL 354
+K+TEHK +L+ N +T R++R+ V D DATDSSSDD+EE F+
Sbjct: 12 IKFTEHKTNTTTIVSELT--NTHQT-------RILRISVTDPDATDSSSDDEEEEHQRFV 62
Query: 355 FPRRRVKRLINEIRVE 402
RRRVK+ +NE+ ++
Sbjct: 63 SKRRRVKKFVNEVYLD 78
>TAIR9_protein||AT4G23750.2 | Symbols: CRF2 | CRF2 (CYTOKININ RESPONSE FACTOR
2); DNA binding / transcription factor | chr4:12376751-12377782
FORWARD
Length = 344
Score = 52 bits (123), Expect = 1e-007
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 13/76 (17%)
Frame = +1
Query: 187 VKYTEHKRVIKKYTKKLSVENKKKTSTVHDSARLVRVCVMDGDATDSSSDDDEE----FL 354
+K+TEHK +L+ N +T R++R+ V D DATDSSSDD+EE F+
Sbjct: 12 IKFTEHKTNTTTIVSELT--NTHQT-------RILRISVTDPDATDSSSDDEEEEHQRFV 62
Query: 355 FPRRRVKRLINEIRVE 402
RRRVK+ +NE+ ++
Sbjct: 63 SKRRRVKKFVNEVYLD 78
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,880,021,904
Number of Sequences: 33410
Number of Extensions: 27880021904
Number of Successful Extensions: 910784511
Number of sequences better than 0.0: 0
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