BLASTX 7.6.2
Query= UN61916 /QuerySize=670
(669 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297817832|ref|XP_002876799.1| hypothetical protein ARALYDRAFT... 77 2e-012
gi|15226859|ref|NP_178312.1| F-box protein [Arabidopsis thaliana] 74 2e-011
gi|297814446|ref|XP_002875106.1| predicted protein [Arabidopsis ... 73 3e-011
gi|9279735|dbj|BAB01325.1| unnamed protein product [Arabidopsis ... 70 2e-010
gi|18404563|ref|NP_566771.1| F-box protein [Arabidopsis thaliana] 70 2e-010
gi|297817828|ref|XP_002876797.1| hypothetical protein ARALYDRAFT... 65 7e-009
gi|229914872|gb|ACQ90597.1| putative F-box protein [Eutrema halo... 55 1e-005
>gi|297817832|ref|XP_002876799.1| hypothetical protein ARALYDRAFT_904436
[Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 77 bits (188), Expect = 2e-012
Identities = 53/114 (46%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Frame = +1
Query: 97 SMEEQQGHEKDK-IASSFSSERGRR--EVTEIIINDDALEEIMLRLPVKSLISFQAVSKH 267
SME+ Q +K +ASS E RR E +I I +D +EEIM+ LPVKSL+ F+AVSKH
Sbjct: 3 SMEKTQKLLTNKQVASSARKEIKRRGSEFEKIHIPNDIVEEIMVMLPVKSLMRFRAVSKH 62
Query: 268 WRRMITHKSFRERYMLHQKTLEPKLICVYN---DIDCYKANYALKEMRLEWSSA 420
WR +IT K F ERY +++ E KL+ V N D K N++L + LE +SA
Sbjct: 63 WRSLITSKEFGERYKALEQSKECKLLLVSNYFKDNVAQKTNFSLITVALEPTSA 116
>gi|15226859|ref|NP_178312.1| F-box protein [Arabidopsis thaliana]
Length = 334
Score = 74 bits (179), Expect = 2e-011
Identities = 44/112 (39%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Frame = +1
Query: 85 TIDRSMEEQQGHEKDKIASSFSSERGRREVTEIIINDDALEEIMLRLPVKSLISFQAVSK 264
T R +++ EK + + +R R+E +I I ++ +EEI++RLPVKSL FQ VSK
Sbjct: 5 TSSRGQQDEISGEKHEPTPTKEIKRRRKEFEKIHIPNEIVEEILVRLPVKSLTRFQTVSK 64
Query: 265 HWRRMITHKSFRERYMLHQKTLEPKLICVYND-IDCYKANYALKEMRLEWSS 417
HWR +IT K F +R+M +K+ KL+ V +D +D + LK + LE +S
Sbjct: 65 HWRTLITSKYFGKRHMALEKSKGCKLLFVCDDFVDRAEDTLFLKTVALEKTS 116
>gi|297814446|ref|XP_002875106.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 404
Score = 73 bits (178), Expect = 3e-011
Identities = 44/90 (48%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Frame = +1
Query: 154 ERGRREVTEIIINDDALEEIMLRLPVKSLISFQAVSKHWRRMITHKSFRERYMLHQKTLE 333
+R RRE +I I ++ +EEIM+RLPVKSL FQ+VSK+WR +IT K F ER+M +K+
Sbjct: 13 KRRRREFEKIHIPNEIVEEIMVRLPVKSLTRFQSVSKYWRTLITSKDFGERHMALEKSKG 72
Query: 334 PKLICVYNDI-DCYKANYALKEMRLEWSSA 420
KLI V +D D + LK + LE +SA
Sbjct: 73 CKLIFVCDDFEDRAEDTLFLKTVALEKTSA 102
>gi|9279735|dbj|BAB01325.1| unnamed protein product [Arabidopsis thaliana]
Length = 184
Score = 70 bits (171), Expect = 2e-010
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = +3
Query: 444 EEVYHISNDHEQEDVMVSKSLDGLFCFYGRTNFKTPIKVMNPSTRWSFTLPLASIQLV-H 620
EE Y S H++ ++ SKS+DGLFC Y + K PI V+NP TRWS LPLA IQ +
Sbjct: 68 EEEYLTSKKHKERRILFSKSVDGLFCLYSGVDMKQPIMVINPDTRWSKKLPLARIQRKNY 127
Query: 621 LDSN-VEFS 644
LDSN VEFS
Sbjct: 128 LDSNKVEFS 136
>gi|18404563|ref|NP_566771.1| F-box protein [Arabidopsis thaliana]
Length = 179
Score = 70 bits (171), Expect = 2e-010
Identities = 38/69 (55%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Frame = +3
Query: 444 EEVYHISNDHEQEDVMVSKSLDGLFCFYGRTNFKTPIKVMNPSTRWSFTLPLASIQLV-H 620
EE Y S H++ ++ SKS+DGLFC Y + K PI V+NP TRWS LPLA IQ +
Sbjct: 78 EEEYLTSKKHKERRILFSKSVDGLFCLYSGVDMKQPIMVINPDTRWSKKLPLARIQRKNY 137
Query: 621 LDSN-VEFS 644
LDSN VEFS
Sbjct: 138 LDSNKVEFS 146
Score = 55 bits (131), Expect = 7e-006
Identities = 28/48 (58%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Frame = +1
Query: 151 SERGRREVTEIIINDDALEEIMLRLPVKSLISFQAVSKHWRRMITHKS 294
S+R RR+V + I NDD LEEI++RLPVK+L FQ VSKHWR I ++
Sbjct: 9 SKRRRRQVIK-IPNDDVLEEIIVRLPVKTLTRFQTVSKHWRHTIKSRN 55
>gi|297817828|ref|XP_002876797.1| hypothetical protein ARALYDRAFT_904434
[Arabidopsis lyrata subsp. lyrata]
Length = 197
Score = 65 bits (157), Expect = 7e-009
Identities = 49/116 (42%), Positives = 64/116 (55%), Gaps = 10/116 (8%)
Frame = +1
Query: 97 SMEEQQGHEKDK-IASSFSSE--RGRREVTEIIINDDALEEIMLRLPVKSLISFQAVSKH 267
SME+ Q +K +ASS E R R E +I I +D +EEIM+ LPVK+L+ F AVSKH
Sbjct: 3 SMEKTQKLLTNKQVASSARKEIKRRRSEFEKIHIPNDIVEEIMVMLPVKTLMRFLAVSKH 62
Query: 268 WRRMITHKSFRERYMLHQKT----LEPKLICVYNDIDCYKANYALKEMRLEWSSAC 423
WR I K F ERYM +++ LEP V ID + + E L S +C
Sbjct: 63 WRSFIMSKDFVERYMALEQSKEFALEPTSASV---IDEKALKFEITEWNLYISESC 115
>gi|229914872|gb|ACQ90597.1| putative F-box protein [Eutrema halophilum]
Length = 517
Score = 55 bits (130), Expect = 1e-005
Identities = 27/49 (55%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Frame = +1
Query: 208 EIMLRLPVKSLISFQAVSKHWRRMITHKSFRERYMLHQKTL-EPKLICV 351
EI++RLPV LI FQ +SKHWR +I + F +RY HQKT +PKL+ V
Sbjct: 116 EILVRLPVIRLIRFQTLSKHWRCLIRSRGFGKRYASHQKTTKDPKLLLV 164
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,290,166,940
Number of Sequences: 15229318
Number of Extensions: 6207290166940
Number of Successful Extensions: 1469931442
Number of sequences better than 0.0: 0
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