BLASTX 7.6.2
Query= UN61936 /QuerySize=742
(741 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein w... 242 2e-064
TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein w... 242 2e-064
TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein w... 242 2e-064
TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATIO... 236 1e-062
TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION... 189 2e-048
TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALI... 166 1e-041
TAIR9_protein||AT3G63500.1 | Symbols: | unknown protein | chr3:... 57 1e-008
TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION... 55 4e-008
>TAIR9_protein||AT4G30200.1 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14789103 REVERSE
Length = 686
Score = 242 bits (617), Expect = 2e-064
Identities = 122/178 (68%), Positives = 136/178 (76%), Gaps = 8/178 (4%)
Frame = +3
Query: 204 SVKAKG---SIYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDDP--G 368
SV KG +IYCKNLAC+A+LRQED FC+RCSCCIC KY NKDP+LWLTC SD P G
Sbjct: 117 SVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEG 176
Query: 369 ESCGLSCHLDCAFKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRS 548
ESCG SCHL+CAF E+SGL KDK S CF+CVSCGK NSLLECWKKQL IAKETR
Sbjct: 177 ESCGFSCHLECAFNTEKSGLGKDKQSEGC--CFYCVSCGKANSLLECWKKQLTIAKETRR 234
Query: 549 VDVLCYRLVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSL 722
V+VLCYRL L QKLLK + KYR L E V+EAVK+L ++ GPLT LP M RG VN L
Sbjct: 235 VEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADV-GPLTGLPMKMGRGIVNRL 291
Score = 60 bits (143), Expect = 2e-009
Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 62 VSEKAAVNNGKSSTSCG--FGLEDCVKIIRQLECSGHVEKSFRQEFLT 199
+S K NNG S + G GLE CVKIIRQLECSGH++K+FRQ+FLT
Sbjct: 572 ISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLT 619
>TAIR9_protein||AT4G30200.3 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 703
Score = 242 bits (617), Expect = 2e-064
Identities = 122/178 (68%), Positives = 136/178 (76%), Gaps = 8/178 (4%)
Frame = +3
Query: 204 SVKAKG---SIYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDDP--G 368
SV KG +IYCKNLAC+A+LRQED FC+RCSCCIC KY NKDP+LWLTC SD P G
Sbjct: 134 SVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEG 193
Query: 369 ESCGLSCHLDCAFKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRS 548
ESCG SCHL+CAF E+SGL KDK S CF+CVSCGK NSLLECWKKQL IAKETR
Sbjct: 194 ESCGFSCHLECAFNTEKSGLGKDKQSEGC--CFYCVSCGKANSLLECWKKQLTIAKETRR 251
Query: 549 VDVLCYRLVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSL 722
V+VLCYRL L QKLLK + KYR L E V+EAVK+L ++ GPLT LP M RG VN L
Sbjct: 252 VEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADV-GPLTGLPMKMGRGIVNRL 308
Score = 60 bits (143), Expect = 2e-009
Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 62 VSEKAAVNNGKSSTSCG--FGLEDCVKIIRQLECSGHVEKSFRQEFLT 199
+S K NNG S + G GLE CVKIIRQLECSGH++K+FRQ+FLT
Sbjct: 589 ISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLT 636
>TAIR9_protein||AT4G30200.2 | Symbols: VEL1 | Encodes a protein with similarity
to VRN5 and VIN3.Contains both a fibronectin III and PHD finger domain.
VEL1 is a part of a polycomb repressive complex (PRC2) that is involved
in epigenetic silencing of the FLC flowering locus. |
chr4:14786852-14790070 REVERSE
Length = 715
Score = 242 bits (617), Expect = 2e-064
Identities = 122/178 (68%), Positives = 136/178 (76%), Gaps = 8/178 (4%)
Frame = +3
Query: 204 SVKAKG---SIYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDDP--G 368
SV KG +IYCKNLAC+A+LRQED FC+RCSCCIC KY NKDP+LWLTC SD P G
Sbjct: 134 SVNTKGESTTIYCKNLACRAVLRQEDSFCRRCSCCICRKYDDNKDPSLWLTCSSDPPFEG 193
Query: 369 ESCGLSCHLDCAFKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRS 548
ESCG SCHL+CAF E+SGL KDK S CF+CVSCGK NSLLECWKKQL IAKETR
Sbjct: 194 ESCGFSCHLECAFNTEKSGLGKDKQSEGC--CFYCVSCGKANSLLECWKKQLTIAKETRR 251
Query: 549 VDVLCYRLVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSL 722
V+VLCYRL L QKLLK + KYR L E V+EAVK+L ++ GPLT LP M RG VN L
Sbjct: 252 VEVLCYRLFLVQKLLKSSTKYRNLCEVVDEAVKTLEADV-GPLTGLPMKMGRGIVNRL 308
Score = 60 bits (143), Expect = 2e-009
Identities = 30/48 (62%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Frame = +2
Query: 62 VSEKAAVNNGKSSTSCG--FGLEDCVKIIRQLECSGHVEKSFRQEFLT 199
+S K NNG S + G GLE CVKIIRQLECSGH++K+FRQ+FLT
Sbjct: 601 ISMKDNCNNGDHSANGGTESGLEHCVKIIRQLECSGHIDKNFRQKFLT 648
>TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATION5/VIN3-LIKE))
| chr2:8176386-8178788 FORWARD
Length = 530
Score = 236 bits (602), Expect = 1e-062
Identities = 114/177 (64%), Positives = 134/177 (75%), Gaps = 2/177 (1%)
Frame = +3
Query: 198 LESVKAKGSIYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDD--PGE 371
L K KG +YC+NLACQ LR+E FC+RCSCCIC KY NKDP+LWLTC+SD GE
Sbjct: 108 LAKAKGKGKMYCQNLACQNKLREEATFCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGE 167
Query: 372 SCGLSCHLDCAFKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRSV 551
SCGLSCHL+CAF E+SGLK+D PS D+DGCF+CVSCGKTNS +EC KKQL+IA E R V
Sbjct: 168 SCGLSCHLNCAFDSEKSGLKEDTPSSDIDGCFNCVSCGKTNSKIECLKKQLIIANEERRV 227
Query: 552 DVLCYRLVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSL 722
V CYR++LA KLLKGT+KY +SE VE+AV L E P++ LPS M RG VN L
Sbjct: 228 GVFCYRILLAHKLLKGTKKYIIVSEEVEKAVMHLKNEFGVPISCLPSKMSRGLVNRL 284
Score = 57 bits (135), Expect = 1e-008
Identities = 29/65 (44%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Frame = +2
Query: 20 FVSSLSTKEEEEE-----TVSEKAAVNNGKSSTSCGFGLEDCVKIIRQLECSGHVEKSFR 184
F+ S T ++EE +S N + S SC FG E+CV +IRQLECSG V+ FR
Sbjct: 402 FIVSTKTLQDEEVAAVLLNMSNCNNANKMEKSGSCSFGFEECVNLIRQLECSGQVKSDFR 461
Query: 185 QEFLT 199
++FLT
Sbjct: 462 KKFLT 466
>TAIR9_protein||AT5G57380.1 | Symbols: VIN3 | VIN3 (VERNALIZATION INSENSITIVE
3); protein binding / zinc ion binding | chr5:23246538-23249289
REVERSE
Length = 621
Score = 189 bits (479), Expect = 2e-048
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 11/167 (6%)
Frame = +3
Query: 225 IYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDDPGESCGLSCHLDCA 404
I C+NLAC+A L +D FC+RCSCCIC K+ NKDP+LWLTC ++CG SCHL+C
Sbjct: 128 ICCENLACRAALGCDDTFCRRCSCCICQKFDDNKDPSLWLTC------DACGSSCHLECG 181
Query: 405 FKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRSVDVLCYRLVLAQ 584
K + G+ D DLDG F+C CGK N LL CW+KQ+ +AKETR VDVLCYRL L Q
Sbjct: 182 LKQDRYGIGSD----DLDGRFYCAYCGKDNDLLGCWRKQVKVAKETRRVDVLCYRLSLGQ 237
Query: 585 KLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSLA 725
KLL+GT KYR L E ++EAVK L ++ GPL+ M RG VN L+
Sbjct: 238 KLLRGTTKYRNLLELMDEAVKKLEGDV-GPLSGWAMKMARGIVNRLS 283
>TAIR9_protein||AT3G24440.1 | Symbols: VRN5, VIL1 | VRN5 (VERNALIZATION 5) |
chr3:8876207-8878171 REVERSE
Length = 603
Score = 166 bits (420), Expect = 1e-041
Identities = 81/171 (47%), Positives = 109/171 (63%), Gaps = 3/171 (1%)
Frame = +3
Query: 216 KGSIYCKNLACQAILRQEDLFCQRCSCCICHKYGANKDPTLWLTCHSD--DPGESCGLSC 389
+ S CKN +C+A + +ED FC+RCSCC+CH + NKDP+LWL C + D E CGLSC
Sbjct: 44 RSSWICKNASCRANVPKEDSFCKRCSCCVCHNFDENKDPSLWLVCEPEKSDDVEFCGLSC 103
Query: 390 HLDCAFKDEESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRSVDVLCYR 569
H++CAF++ + G+ LDGCF C SCGK + +L CWKKQL+ AKE R D LCYR
Sbjct: 104 HIECAFREVKVGVIALGNLMKLDGCFCCYSCGKVSQILGCWKKQLVAAKEARRRDGLCYR 163
Query: 570 LVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCRGNVNSL 722
+ L +LL GT ++ +L E V A KS+ + GPL + RG V+ L
Sbjct: 164 IDLGYRLLNGTSRFSELHEIV-RAAKSMLEDEVGPLDGPTARTDRGIVSRL 213
>TAIR9_protein||AT3G63500.1 | Symbols: | unknown protein |
chr3:23446331-23449166 REVERSE
Length = 888
Score = 57 bits (136), Expect = 1e-008
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 20/170 (11%)
Frame = +3
Query: 231 CKNLACQAIL----------RQEDLFCQRCSCCICHKYGANKDPTLWLTCHSDDPGESCG 380
CKNL+C+ +L ++D FC C C +C + + W+ C + C
Sbjct: 532 CKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTCSWVGC------DVCL 585
Query: 381 LSCHLDCAFKDE--ESGLKKDKPSHDLDGCFHCVSCGKTNSLLECWKKQLLIAKETRSVD 554
CH DC K+ +G+ + FHCV+C + + K+ L +
Sbjct: 586 HWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACNHPSEMFGFVKEVFLNFAREWKFE 645
Query: 555 VLCYRLVLAQKLLKGTEKYRKLSETVEEAVKSL*TELCGPLTDLPSAMCR 704
C L K+ ++ R + + +A ++ L L LP A R
Sbjct: 646 RFCKELEYVNKIFSSSKDSR--GKQLRQAADAMLASLKSKLIGLPEACNR 693
>TAIR9_protein||AT2G18870.1 | Symbols: VEL3 | VEL3 (VERNALIZATION5/VIN3-LIKE) |
chr2:8167471-8168668 FORWARD
Length = 240
Score = 55 bits (131), Expect = 4e-008
Identities = 25/36 (69%), Positives = 30/36 (83%)
Frame = +2
Query: 92 KSSTSCGFGLEDCVKIIRQLECSGHVEKSFRQEFLT 199
K+ S G GLE CVKIIR+LECSG+VE +FRQ+FLT
Sbjct: 135 KNPESYGLGLEQCVKIIRKLECSGYVESTFRQKFLT 170
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,067,029,910
Number of Sequences: 33410
Number of Extensions: 28067029910
Number of Successful Extensions: 921588008
Number of sequences better than 0.0: 0
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