BLASTX 7.6.2
Query= UN61938 /QuerySize=626
(625 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|193872584|gb|ACF23020.1| ST5-18-3 [Eutrema halophilum] 242 3e-062
gi|18424735|ref|NP_568976.1| transcription elongation factor SPT... 240 2e-061
gi|18415875|ref|NP_568201.1| transcription elongation factor SPT... 223 2e-056
gi|297806927|ref|XP_002871347.1| positive transcription elongati... 221 5e-056
gi|21554358|gb|AAM63465.1| unknown [Arabidopsis thaliana] 221 7e-056
gi|255544187|ref|XP_002513156.1| suppressor of ty, putative [Ric... 216 2e-054
gi|255629207|gb|ACU14948.1| unknown [Glycine max] 214 8e-054
gi|224109936|ref|XP_002315361.1| predicted protein [Populus tric... 213 1e-053
gi|225463799|ref|XP_002270173.1| PREDICTED: hypothetical protein... 211 5e-053
gi|224097390|ref|XP_002310913.1| predicted protein [Populus tric... 210 1e-052
gi|22535674|dbj|BAC10848.1| unknown protein [Oryza sativa Japoni... 192 3e-047
gi|242050924|ref|XP_002463206.1| hypothetical protein SORBIDRAFT... 189 4e-046
gi|226510456|ref|NP_001150575.1| transcription elongation factor... 187 1e-045
gi|116792175|gb|ABK26260.1| unknown [Picea sitchensis] 184 7e-045
gi|334187526|ref|NP_001190264.1| transcription elongation factor... 184 7e-045
gi|326522414|dbj|BAK07669.1| predicted protein [Hordeum vulgare ... 181 1e-043
gi|334188606|ref|NP_001190609.1| transcription elongation factor... 169 4e-040
gi|302813002|ref|XP_002988187.1| hypothetical protein SELMODRAFT... 164 7e-039
gi|168026051|ref|XP_001765546.1| transcription elongation factor... 164 1e-038
gi|302760109|ref|XP_002963477.1| hypothetical protein SELMODRAFT... 162 4e-038
>gi|193872584|gb|ACF23020.1| ST5-18-3 [Eutrema halophilum]
Length = 132
Score = 242 bits (617), Expect = 3e-062
Identities = 112/116 (96%), Positives = 114/116 (98%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSAPAQIPTSFGHELRACLRCRLVKTYDQF DAGCENCPFFKMEEDHERIVEVTTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPL EEMQH+CQEERVQY+PPKRM
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYMPPKRM 116
>gi|18424735|ref|NP_568976.1| transcription elongation factor SPT4-2
[Arabidopsis thaliana]
Length = 116
Score = 240 bits (610), Expect = 2e-061
Identities = 112/116 (96%), Positives = 113/116 (97%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSAPAQIPTSFGHELRACLRCRLVKTYDQF DAGCENCPFFKMEEDHERIVEVTTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPL EEMQH+CQEERVQYV PKRM
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKRM 116
>gi|18415875|ref|NP_568201.1| transcription elongation factor SPT4-1
[Arabidopsis thaliana]
Length = 116
Score = 223 bits (567), Expect = 2e-056
Identities = 102/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MG APAQIPTSFGHELRACLRCRLVKTYDQF D+GCENCPFFK+E+DHERIV+VTTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIIS+MDP RSWAARWLRIGKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+
Sbjct: 61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKRI 116
>gi|297806927|ref|XP_002871347.1| positive transcription elongation factor/ zinc
ion binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 116
Score = 221 bits (563), Expect = 5e-056
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MG APAQIPTSFGHELRACLRCRLVKTYDQF D+GCENCPFFKME++HERIV+VTTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKMEDEHERIVDVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIIS+MDP +SWAARWLRIGKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+
Sbjct: 61 GIISMMDPRKSWAARWLRIGKFAPGCYTLAVSEALPEEMQSICQQVRVQYVPPKRI 116
>gi|21554358|gb|AAM63465.1| unknown [Arabidopsis thaliana]
Length = 116
Score = 221 bits (562), Expect = 7e-056
Identities = 101/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MG APAQIPTSFGHELRACLRCRLVKTYDQF D+GCENCPFFK+E+DHERIV+VTTPNF+
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFD 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIIS+MDP RSWAARWLRIGKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+
Sbjct: 61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSETLPEEMQFICQQARVQYVPPKRI 116
>gi|255544187|ref|XP_002513156.1| suppressor of ty, putative [Ricinus communis]
Length = 116
Score = 216 bits (549), Expect = 2e-054
Identities = 96/116 (82%), Positives = 108/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGS PAQIPTSFGHELRACLRCRLVKTYDQF ++GCENCPFFKM+EDHER+V+ TTPNFN
Sbjct: 1 MGSVPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDP+RSWAARWLRIG+F PGCYTLAVSE L E++Q +C+EERVQY PPKR+
Sbjct: 61 GIISVMDPTRSWAARWLRIGRFVPGCYTLAVSEALPEDLQALCEEERVQYNPPKRV 116
>gi|255629207|gb|ACU14948.1| unknown [Glycine max]
Length = 116
Score = 214 bits (544), Expect = 8e-054
Identities = 97/116 (83%), Positives = 107/116 (92%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
M +APAQIPTSFGHELRACLRCRLVKTYDQF ++GCENC FFKMEEDHER+V+ TTPNFN
Sbjct: 1 MATAPAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMEEDHERVVDCTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDP+RSWAARWLRIGKF PG YTLAVSE L EEMQ IC++ERVQY+PPKR+
Sbjct: 61 GIISVMDPNRSWAARWLRIGKFVPGVYTLAVSEALPEEMQAICEDERVQYIPPKRL 116
>gi|224109936|ref|XP_002315361.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 213 bits (542), Expect = 1e-053
Identities = 94/116 (81%), Positives = 108/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSA AQIPTSFGHELRACLRCRLVKTYDQF ++GCENCPFFKM+EDHER+V+ TTPNF
Sbjct: 1 MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFT 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDPSRSWAARWLRIG+F PGCYTLAVSE L E++Q++C++ERV Y+PPKR+
Sbjct: 61 GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116
>gi|225463799|ref|XP_002270173.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 114
Score = 211 bits (537), Expect = 5e-053
Identities = 94/113 (83%), Positives = 106/113 (93%)
Frame = +1
Query: 73 SAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGI 252
S AQIPTSFGHELRACLRCRLVKTYDQF ++GCENCPFFKM+EDHER+V+ TTPNFNGI
Sbjct: 2 SNAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFFKMDEDHERVVDCTTPNFNGI 61
Query: 253 ISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKR 411
IS+MDPSRSWAARWLRIG+F PGCYTLAVSE L E++Q++C+EERVQYVPPKR
Sbjct: 62 ISMMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEEERVQYVPPKR 114
>gi|224097390|ref|XP_002310913.1| predicted protein [Populus trichocarpa]
Length = 116
Score = 210 bits (534), Expect = 1e-052
Identities = 93/116 (80%), Positives = 107/116 (92%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSA AQIPTSFGHELRACLRCRLVKTYDQF ++GCENC FFKM+EDHER+V+ TTPNF
Sbjct: 1 MGSAAAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCSFFKMDEDHERVVDCTTPNFT 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDPSRSWAARWLRIG+F PGCYTLAVSE L E++Q++C++ERV Y+PPKR+
Sbjct: 61 GIISVMDPSRSWAARWLRIGRFVPGCYTLAVSEALPEDLQNLCEDERVPYIPPKRV 116
>gi|22535674|dbj|BAC10848.1| unknown protein [Oryza sativa Japonica Group]
Length = 131
Score = 192 bits (487), Expect = 3e-047
Identities = 87/115 (75%), Positives = 94/115 (81%)
Frame = +1
Query: 70 GSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNG 249
G AQIPTSFGHELRACLRCRLVKTYDQF + GCENCPF ME DH+ +V TTPNF G
Sbjct: 17 GPKYAQIPTSFGHELRACLRCRLVKTYDQFMEQGCENCPFLDMERDHDNVVNCTTPNFTG 76
Query: 250 IISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
IISVMDP RSWAARWLRIGKF PGCYTLAV+E L EE Q +CQ+ VQY PPKR+
Sbjct: 77 IISVMDPGRSWAARWLRIGKFIPGCYTLAVAEELPEEYQSVCQDNNVQYFPPKRV 131
>gi|242050924|ref|XP_002463206.1| hypothetical protein SORBIDRAFT_02g039750
[Sorghum bicolor]
Length = 128
Score = 189 bits (478), Expect = 4e-046
Identities = 86/111 (77%), Positives = 94/111 (84%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
A+IPTSFG ELRACLRCRLVKTYDQF GCENCPF +ME +H+ +V TTPNF GIIS+
Sbjct: 18 AEIPTSFGPELRACLRCRLVKTYDQFRQNGCENCPFLEMEREHDNVVNCTTPNFTGIISL 77
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
MDPSRSWAARWLRIG+F PGCYTLAVSE L EE Q ICQE VQYVPPKR+
Sbjct: 78 MDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQENNVQYVPPKRV 128
>gi|226510456|ref|NP_001150575.1| transcription elongation factor SPT4 [Zea
mays]
Length = 129
Score = 187 bits (474), Expect = 1e-045
Identities = 84/111 (75%), Positives = 95/111 (85%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
A+IPTSFG ELRACLRCRLVKTYDQF + GCENCPF +M+ +H+ +V TTPNF GIIS+
Sbjct: 19 AEIPTSFGPELRACLRCRLVKTYDQFRENGCENCPFLEMDREHDNVVNCTTPNFTGIISL 78
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
MDPSRSWAARWLRIG+F PGCYTLAVSE L EE Q ICQ+ VQYVPPKR+
Sbjct: 79 MDPSRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGICQDNNVQYVPPKRV 129
>gi|116792175|gb|ABK26260.1| unknown [Picea sitchensis]
Length = 115
Score = 184 bits (467), Expect = 7e-045
Identities = 79/109 (72%), Positives = 95/109 (87%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
AQ+PTSFG ELRACLRCRL+KTYDQF + GCENCP F M++DH+R+V+ TT NF+GIIS
Sbjct: 5 AQVPTSFGRELRACLRCRLIKTYDQFRETGCENCPAFNMDQDHDRVVDCTTSNFSGIISC 64
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPK 408
MDP+RSW+ARWLRI +F PGCYTLAVSE L+EEMQ +C++ VQYVPPK
Sbjct: 65 MDPTRSWSARWLRISRFVPGCYTLAVSEALSEEMQAVCEDNNVQYVPPK 113
>gi|334187526|ref|NP_001190264.1| transcription elongation factor SPT4-1
[Arabidopsis thaliana]
Length = 116
Score = 184 bits (467), Expect = 7e-045
Identities = 88/116 (75%), Positives = 95/116 (81%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MG APAQIPTSFGHELRACLRCRLVKTYDQF D+GCENCPFFK+E+DHERIV+VTTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
G +S L GKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+
Sbjct: 61 GFVSDRREINLTHCNILFPGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKRI 116
>gi|326522414|dbj|BAK07669.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 127
Score = 181 bits (457), Expect = 1e-043
Identities = 81/110 (73%), Positives = 91/110 (82%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
AQIP SFGHELRACLRCRLVKTYDQF + GCENCPF M++D + +V TT NF GIIS+
Sbjct: 17 AQIPNSFGHELRACLRCRLVKTYDQFRENGCENCPFLDMDKDRDNVVSCTTANFTGIISL 76
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKR 411
MDP+RSWAARWLRIG+F PGCYTLAVSE L EE Q +CQ+ VQY PPKR
Sbjct: 77 MDPTRSWAARWLRIGRFIPGCYTLAVSEELPEEYQGMCQDNNVQYFPPKR 126
>gi|334188606|ref|NP_001190609.1| transcription elongation factor SPT4-2
[Arabidopsis thaliana]
Length = 94
Score = 169 bits (426), Expect = 4e-040
Identities = 78/79 (98%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSAPAQIPTSFGHELRACLRCRLVKTYDQF DAGCENCPFFKMEEDHERIVEVTTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRI 303
GIISVMDPSRSWAARWLRI
Sbjct: 61 GIISVMDPSRSWAARWLRI 79
>gi|302813002|ref|XP_002988187.1| hypothetical protein SELMODRAFT_235476
[Selaginella moellendorffii]
Length = 116
Score = 164 bits (415), Expect = 7e-039
Identities = 72/107 (67%), Positives = 87/107 (81%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
AQ+P S G +LRACLRCRLVKTYDQF GCENC FF ME++H+RI+E TT NF+G+IS
Sbjct: 9 AQVPASLGRDLRACLRCRLVKTYDQFNKNGCENCKFFHMEQEHDRILECTTVNFSGLISS 68
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
MDP+ SWAARWLRI KF PGCY LAVS L E+MQ+IC++ ++YVP
Sbjct: 69 MDPTGSWAARWLRISKFVPGCYALAVSGVLNEDMQNICEDNNIKYVP 115
>gi|168026051|ref|XP_001765546.1| transcription elongation factor SPT4
[Physcomitrella patens subsp. patens]
Length = 113
Score = 164 bits (414), Expect = 1e-038
Identities = 70/107 (65%), Positives = 86/107 (80%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
AQ+PTSFG ELR CLRC L+KTYDQF + GCENC FF M++DH+R++E TTPNF G+IS
Sbjct: 5 AQVPTSFGRELRVCLRCSLMKTYDQFKENGCENCLFFNMDKDHDRVLECTTPNFAGVISC 64
Query: 262 MDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
MDP+ SWA+RWLRI KF PGCY L V+ L+EEMQ IC + ++YVP
Sbjct: 65 MDPTSSWASRWLRISKFVPGCYALTVTGELSEEMQAICDDNNIRYVP 111
>gi|302760109|ref|XP_002963477.1| hypothetical protein SELMODRAFT_80011
[Selaginella moellendorffii]
Length = 117
Score = 162 bits (409), Expect = 4e-038
Identities = 73/108 (67%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISV 261
AQ+P S G +LRACLRCRLVKTYDQF GCENC FF ME++H+RI+E TT NF+G+IS
Sbjct: 9 AQVPASLGRDLRACLRCRLVKTYDQFNKNGCENCKFFHMEQEHDRILECTTVNFSGLISS 68
Query: 262 MDPSRSWAARWLRI-GKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
MDP+ SWAARWLRI GKF PGCY LAVS L E+MQ+IC++ ++YVP
Sbjct: 69 MDPTGSWAARWLRITGKFVPGCYALAVSGVLNEDMQNICEDNNIKYVP 116
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,290,166,940
Number of Sequences: 15229318
Number of Extensions: 6207290166940
Number of Successful Extensions: 1469931442
Number of sequences better than 0.0: 0
|
