BLASTX 7.6.2
Query= UN61938 /QuerySize=626
(625 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q94C60|SPT42_ARATH Transcription elongation factor SPT4 homol... 240 9e-063
sp|Q8LCQ3|SPT41_ARATH Transcription elongation factor SPT4 homol... 223 9e-058
sp|Q6DGQ0|SPT4H_DANRE Transcription elongation factor SPT4 OS=Da... 87 1e-016
sp|P63271|SPT41_MOUSE Transcription elongation factor SPT4 1 OS=... 84 8e-016
sp|Q3SYX6|SPT4H_BOVIN Transcription elongation factor SPT4 OS=Bo... 84 8e-016
sp|P63272|SPT4H_HUMAN Transcription elongation factor SPT4 OS=Ho... 84 8e-016
sp|Q4R941|SPT4H_MACFA Transcription elongation factor SPT4 OS=Ma... 84 8e-016
sp|Q5RFH5|SPT4H_PONAB Transcription elongation factor SPT4 OS=Po... 84 8e-016
sp|Q9TVQ5|SPT4H_DROME Transcription elongation factor SPT4 OS=Dr... 83 1e-015
sp|Q5HZ97|SPT4H_XENLA Transcription elongation factor SPT4 OS=Xe... 82 2e-015
sp|Q9Z199|SPT42_MOUSE Transcription elongation factor SPT4 2 OS=... 81 5e-015
sp|Q7S743|SPT4_NEUCR Transcription elongation factor spt-4 OS=Ne... 81 5e-015
sp|Q4WU00|SPT4_ASPFU Transcription elongation factor spt4 OS=Asp... 71 4e-012
sp|Q628A6|SPT4H_CAEBR Transcription elongation factor SPT4 OS=Ca... 70 7e-012
sp|P81205|SPT4_KLULA Transcription elongation factor SPT4 OS=Klu... 70 7e-012
sp|Q9TZ93|SPT4H_CAEEL Transcription elongation factor SPT4 OS=Ca... 69 2e-011
sp|Q5KB83|SPT4_CRYNE Transcription elongation factor SPT4 OS=Cry... 69 3e-011
sp|Q5AK73|SPT4_CANAL Transcription elongation factor SPT4 OS=Can... 65 2e-010
>sp|Q94C60|SPT42_ARATH Transcription elongation factor SPT4 homolog 2
OS=Arabidopsis thaliana GN=At5g63670 PE=2 SV=1
Length = 116
Score = 240 bits (610), Expect = 9e-063
Identities = 112/116 (96%), Positives = 113/116 (97%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MGSAPAQIPTSFGHELRACLRCRLVKTYDQF DAGCENCPFFKMEEDHERIVEVTTPNFN
Sbjct: 1 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFRDAGCENCPFFKMEEDHERIVEVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPL EEMQH+CQEERVQYV PKRM
Sbjct: 61 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLPEEMQHLCQEERVQYVLPKRM 116
>sp|Q8LCQ3|SPT41_ARATH Transcription elongation factor SPT4 homolog 1
OS=Arabidopsis thaliana GN=At5g08565 PE=3 SV=3
Length = 116
Score = 223 bits (567), Expect = 9e-058
Identities = 102/116 (87%), Positives = 109/116 (93%)
Frame = +1
Query: 67 MGSAPAQIPTSFGHELRACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFN 246
MG APAQIPTSFGHELRACLRCRLVKTYDQF D+GCENCPFFK+E+DHERIV+VTTPNFN
Sbjct: 1 MGEAPAQIPTSFGHELRACLRCRLVKTYDQFRDSGCENCPFFKIEDDHERIVDVTTPNFN 60
Query: 247 GIISVMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKRM 414
GIIS+MDP RSWAARWLRIGKFAPGCYTLAVSE L EEMQ ICQ+ RVQYVPPKR+
Sbjct: 61 GIISMMDPRRSWAARWLRIGKFAPGCYTLAVSEALPEEMQFICQQARVQYVPPKRI 116
>sp|Q6DGQ0|SPT4H_DANRE Transcription elongation factor SPT4 OS=Danio rerio
GN=supt4h1 PE=3 SV=1
Length = 117
Score = 87 bits (213), Expect = 1e-016
Identities = 40/86 (46%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + E T+ +F+G+I++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCESYLQMKGNREMVYECTSSSFDGVIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVS 342
P SW A+W RIG F PG Y + V+
Sbjct: 65 SPEDSWVAKWQRIGNFKPGVYAVTVT 90
>sp|P63271|SPT41_MOUSE Transcription elongation factor SPT4 1 OS=Mus musculus
GN=Supt4h1 PE=2 SV=1
Length = 117
Score = 84 bits (205), Expect = 8e-016
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GII++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|Q3SYX6|SPT4H_BOVIN Transcription elongation factor SPT4 OS=Bos taurus
GN=SUPT4H1 PE=3 SV=1
Length = 117
Score = 84 bits (205), Expect = 8e-016
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GII++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|P63272|SPT4H_HUMAN Transcription elongation factor SPT4 OS=Homo sapiens
GN=SUPT4H1 PE=1 SV=1
Length = 117
Score = 84 bits (205), Expect = 8e-016
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GII++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|Q4R941|SPT4H_MACFA Transcription elongation factor SPT4 OS=Macaca
fascicularis GN=SUPT4H1 PE=3 SV=1
Length = 117
Score = 84 bits (205), Expect = 8e-016
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GII++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|Q5RFH5|SPT4H_PONAB Transcription elongation factor SPT4 OS=Pongo abelii
GN=SUPT4H1 PE=3 SV=1
Length = 117
Score = 84 bits (205), Expect = 8e-016
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GII++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIIAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPGDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|Q9TVQ5|SPT4H_DROME Transcription elongation factor SPT4 OS=Drosophila
melanogaster GN=spt4 PE=1 SV=1
Length = 116
Score = 83 bits (204), Expect = 1e-015
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +1
Query: 112 LRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAA 288
LRACL C LVK++DQF GCENC F +M+ + + + + T+ NF+GII++ P+ SW A
Sbjct: 13 LRACLVCSLVKSFDQFETDGCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVA 72
Query: 289 RWLRIGKFAPGCYTLAVSEPLTE 357
+W R+ +F G Y ++VS L +
Sbjct: 73 KWQRLSRFTRGIYAISVSGTLPQ 95
>sp|Q5HZ97|SPT4H_XENLA Transcription elongation factor SPT4 OS=Xenopus laevis
GN=supt4h1 PE=3 SV=1
Length = 117
Score = 82 bits (202), Expect = 2e-015
Identities = 40/104 (38%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GI+++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGIVAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W RI F PG Y ++V+ L + + + V Y
Sbjct: 65 SPDDSWVSKWQRITNFKPGVYAVSVTGRLPQGIVRELKSRGVVY 108
>sp|Q9Z199|SPT42_MOUSE Transcription elongation factor SPT4 2 OS=Mus musculus
GN=Supt4h2 PE=2 SV=1
Length = 117
Score = 81 bits (198), Expect = 5e-015
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Frame = +1
Query: 88 IPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVM 264
+P H LRACL C LVKT DQF GC+NC + +M+ + E + + T+ +F+GI ++M
Sbjct: 6 VPKDLRH-LRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGINAMM 64
Query: 265 DPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQY 396
P SW ++W R+ F PG Y ++V+ L + + + V Y
Sbjct: 65 SPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAY 108
>sp|Q7S743|SPT4_NEUCR Transcription elongation factor spt-4 OS=Neurospora crassa
GN=spt-4 PE=3 SV=1
Length = 120
Score = 81 bits (198), Expect = 5e-015
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 LRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAA 288
LRAC+ C +V TY +F D GC NC F ++ ++I T+ F GII++ +P +SW A
Sbjct: 14 LRACMVCSIVMTYARFRDEGCPNCEDFLHLQGSPDQIDSCTSQVFEGIITIANPQKSWVA 73
Query: 289 RWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
+W R+ + G Y VS L ++++ +++ +QY+P
Sbjct: 74 KWQRLDGYVKGVYATKVSGQLPDDVRTTLEDDGIQYIP 111
>sp|Q4WU00|SPT4_ASPFU Transcription elongation factor spt4 OS=Aspergillus
fumigatus GN=spt4 PE=3 SV=1
Length = 156
Score = 71 bits (173), Expect = 4e-012
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
Frame = +1
Query: 112 LRACLRCRLVKTYDQFGDAGCENCP-FFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAA 288
LRAC+ C LV+ + +F GC NC + +++ I E T+ F G+I++ DPS SW A
Sbjct: 15 LRACMVCSLVQLHSKFMRDGCPNCDNVLGLRGNNDAIQECTSQVFEGLITLRDPSTSWVA 74
Query: 289 RWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
RW R+ + G Y + V+ L +++ ++ V+Y+P
Sbjct: 75 RWQRLEGYVAGTYAVKVTGSLPDDVITNLEDSGVRYIP 112
>sp|Q628A6|SPT4H_CAEBR Transcription elongation factor SPT4 OS=Caenorhabditis
briggsae GN=spt-4 PE=3 SV=1
Length = 120
Score = 70 bits (171), Expect = 7e-012
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIIS 258
A IP+ LRACL C L+K+ D F GCENC ++ D E++ + T+ N++G+I+
Sbjct: 3 ASIPSDL-RNLRACLLCSLIKSVDAFQTDGCENCDEVLHLKGDEEKVYDCTSANYDGMIA 61
Query: 259 VMDPSRSWAARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVPPKR 411
M SW +W ++ + G Y ++VS L + + V+Y +R
Sbjct: 62 AMSNDDSWVCKWQKMQRRVKGIYAISVSGSLPSNVVSDLKSMGVRYKANQR 112
>sp|P81205|SPT4_KLULA Transcription elongation factor SPT4 OS=Kluyveromyces
lactis GN=SPT4 PE=3 SV=1
Length = 102
Score = 70 bits (171), Expect = 7e-012
Identities = 33/86 (38%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Frame = +1
Query: 115 RACLRCRLVKTYDQFGDAGCENCPFFKMEEDHERIVEVTTPNFNGIISVMDPSRSWAARW 294
RAC+ C LV++ +F GC NC EE VE T+P+F G++ + PSRSW ARW
Sbjct: 5 RACMLCGLVQSTAEFNRNGCPNCQSI-FEEAGVSAVECTSPSFEGLVGMCKPSRSWVARW 63
Query: 295 LRIGKFAPGCYTLAVSEPLTEEMQHI 372
+ I + PG Y + + L E+ +
Sbjct: 64 MSIDSYIPGMYAVKIDGRLPIEVTEL 89
>sp|Q9TZ93|SPT4H_CAEEL Transcription elongation factor SPT4 OS=Caenorhabditis
elegans GN=spt-4 PE=2 SV=1
Length = 120
Score = 69 bits (167), Expect = 2e-011
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Frame = +1
Query: 82 AQIPTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIIS 258
A +P LRACL C LVK+ + F GCENC ++ D E++ + T+ N++G+I+
Sbjct: 3 ASVPADL-RNLRACLLCSLVKSVESFQKEGCENCEDVLHLKGDEEKVYDCTSANYDGMIA 61
Query: 259 VMDPSRSWAARWLRIGKFAPGCYTLAVS 342
M + SW +W ++ + G Y ++VS
Sbjct: 62 AMSNNESWVCKWQKMQRKVKGMYAISVS 89
>sp|Q5KB83|SPT4_CRYNE Transcription elongation factor SPT4 OS=Cryptococcus
neoformans GN=SPT4 PE=3 SV=1
Length = 113
Score = 69 bits (166), Expect = 3e-011
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Frame = +1
Query: 91 PTSFGHELRACLRCRLVKTYDQFGDAGCENC-PFFKMEEDHERIVEVTTPNFNGIISVMD 267
P S ELRACL C ++++ + F GC NC +M ER+ E T+ ++G+I++++
Sbjct: 3 PKSGRAELRACLVCSILQSTNDFLTQGCPNCEDILEMRGSAERVAECTSLLYDGMIAMIE 62
Query: 268 PSRSWAARWLRIGKFAPGCYTLAVS 342
PS SW ARW RI K G Y + V+
Sbjct: 63 PSESWVARWQRIDKRMRGIYAVRVT 87
>sp|Q5AK73|SPT4_CANAL Transcription elongation factor SPT4 OS=Candida albicans
GN=SPT4 PE=3 SV=1
Length = 112
Score = 65 bits (158), Expect = 2e-010
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 115 RACLRCRLVKTYDQFGDAGCENCP--FFKMEEDHERIVEVTTPNFNGIISVMDPSR-SWA 285
RAC+ C +++ F D GC NC D++++ + T+P+F G++++ + ++ SW
Sbjct: 7 RACMLCGIIQPMKSFIDYGCPNCESLLHYQYNDNKQVQDCTSPSFEGLVALGEDNKGSWV 66
Query: 286 ARWLRIGKFAPGCYTLAVSEPLTEEMQHICQEERVQYVP 402
ARWLRI F G Y + V+ L + +E+ V Y P
Sbjct: 67 ARWLRIDSFTAGLYAVKVNGKLPPSIIAELEEQNVIYRP 105
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,453,981,912
Number of Sequences: 518415
Number of Extensions: 215453981912
Number of Successful Extensions: 1318477742
Number of sequences better than 0.0: 0
|
