BLASTX 7.6.2
Query= UN61996 /QuerySize=708
(707 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297847156|ref|XP_002891459.1| predicted protein [Arabidopsis ... 148 9e-034
gi|15230154|ref|NP_188494.1| zinc finger CCCH domain-containing ... 65 6e-009
>gi|297847156|ref|XP_002891459.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 735
Score = 148 bits (372), Expect = 9e-034
Identities = 87/137 (63%), Positives = 100/137 (72%), Gaps = 19/137 (13%)
Frame = +3
Query: 327 SQVLPP-----PPAAATHLPENGNA---VSREELNHISNISASLAQFFGNGQPIPNLHST 482
SQVL P P + PENGNA VSREELNHISNISASLAQFFGNGQPIP+L ST
Sbjct: 468 SQVLLPAATNLPGGLNSSNPENGNAQNTVSREELNHISNISASLAQFFGNGQPIPHLQST 527
Query: 483 LNPIQSMQLPQVYGQKEQSSHTQTDI---LSIHTGVVPAVTALQINNSDS--------LV 629
LNP Q+MQ+P+VYG KEQS+HTQ+D+ SIHTG V AVTAL INNSD+ ++
Sbjct: 528 LNPKQAMQVPEVYGTKEQSTHTQSDLPSNNSIHTGGVSAVTALPINNSDTEQLRIPEIVI 587
Query: 630 SLAENPKPSSEETGQKR 680
SLA NPK SSEE +K+
Sbjct: 588 SLAGNPKASSEENREKK 604
Score = 64 bits (153), Expect = 2e-008
Identities = 33/54 (61%), Positives = 39/54 (72%), Gaps = 7/54 (12%)
Frame = +2
Query: 191 MSVSGRKRVSKWDSKEED---LSGNDYPEQR----QQHARFYPEGKGRNGSSKS 331
MS SGRKRVSKWD+KEED L+G DY + +H+RFYPEG GRNGS +S
Sbjct: 1 MSASGRKRVSKWDTKEEDTHHLTGIDYTGKSGYKDPEHSRFYPEGNGRNGSRRS 54
>gi|15230154|ref|NP_188494.1| zinc finger CCCH domain-containing protein 38
[Arabidopsis thaliana]
Length = 676
Score = 65 bits (158), Expect = 6e-009
Identities = 46/112 (41%), Positives = 64/112 (57%), Gaps = 10/112 (8%)
Frame = +3
Query: 381 NAVSREELNHISNISASLAQFFGNGQPIPNLHSTLN-PI--QSMQLPQVYGQKEQSSHTQ 551
N VSRE+++ I+NISASLAQF NGQPIP L L P+ +S+Q Q Q S
Sbjct: 445 NTVSREQIDQITNISASLAQFLANGQPIPQLEQALQLPLHSESVQPNQATTQSNVVSSNP 504
Query: 552 TDI--LSIHTGV--VPAVTALQINNSDSLVSLAENPKPSSEETGQKRERAGK 695
+ L + TG VPAVTA +I+N + + ++ +PK E +K + A K
Sbjct: 505 NQLWGLGMSTGAEGVPAVTASKISNVEEIQEVSLDPK---ENGDKKTDEASK 553
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,207,290,166,940
Number of Sequences: 15229318
Number of Extensions: 6207290166940
Number of Successful Extensions: 1469931442
Number of sequences better than 0.0: 0
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