BLASTX 7.6.2
Query= UN62075 /QuerySize=764
(763 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase,... 335 2e-092
TAIR9_protein||AT5G60990.1 | Symbols: | DEAD/DEAH box helicase,... 101 7e-022
TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mito... 95 4e-020
TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo ... 92 3e-019
TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo ... 92 3e-019
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 92 4e-019
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 92 4e-019
TAIR9_protein||AT3G22310.1 | Symbols: PMH1, ATRH9 | PMH1 (PUTATI... 90 1e-018
TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase,... 89 3e-018
TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase,... 89 3e-018
TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase,... 88 6e-018
TAIR9_protein||AT3G01540.2 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 86 2e-017
TAIR9_protein||AT3G01540.1 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 86 2e-017
TAIR9_protein||AT3G01540.3 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 86 2e-017
TAIR9_protein||AT3G01540.4 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD ... 86 2e-017
TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, ... 86 3e-017
TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, ... 86 3e-017
TAIR9_protein||AT3G09620.1 | Symbols: | DEAD/DEAH box helicase,... 85 4e-017
TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase,... 84 6e-017
TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase,... 84 8e-017
>TAIR9_protein||AT4G34910.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH16) | chr4:16631661-16634834 FORWARD
Length = 627
Score = 335 bits (859), Expect = 2e-092
Identities = 189/248 (76%), Positives = 206/248 (83%), Gaps = 5/248 (2%)
Frame = +2
Query: 26 MGKAKVKPVDDVKPE-VEEADKVEEVEEQRDGGEVAAEEEEEEAEQDKSFEELGLDPRLI 202
MGK K+KPV+DV E V+E +K EEVEEQR+ E EEE++E E KSFEELGLD RLI
Sbjct: 1 MGKTKLKPVEDVNSEVVDEVEKAEEVEEQRNDRE--QEEEQKEEEAPKSFEELGLDSRLI 58
Query: 203 RALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFS-ESGRKKK 379
RAL+KKGIEKPT IQQ+AIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFS +S KKK
Sbjct: 59 RALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSADSVSKKK 118
Query: 380 PAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASLPEILVT 559
AP AF+LV SRELCQQVYTEVS LIELCRVQLKAVQLTSSM S MRNALA LPEILV+
Sbjct: 119 LAPSAFILVPSRELCQQVYTEVSSLIELCRVQLKAVQLTSSMSASDMRNALAGLPEILVS 178
Query: 560 TPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE-II*SR*PPCPKTLPCLLMS 736
TPACIPKC A GVL+P A+S+SL ILVLDEADLLLSYGYE + S P+ CLLMS
Sbjct: 179 TPACIPKCFAAGVLEPTAVSESLSILVLDEADLLLSYGYEDNLRSVTSIIPRRCQCLLMS 238
Query: 737 ATTSSDVE 760
ATTSSDVE
Sbjct: 239 ATTSSDVE 246
>TAIR9_protein||AT5G60990.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH10) | chr5:24546601-24549148 REVERSE
Length = 457
Score = 101 bits (250), Expect = 7e-022
Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 14/187 (7%)
Frame = +2
Query: 143 EEEAEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTL 322
EEE E K+F ELG+ L++A + G + P+ IQ A+P+ LEGKDV+ A+TGSGKT
Sbjct: 2 EEENEVVKTFAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTG 61
Query: 323 AYLLPLLQKLFS-------ESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLK 481
A+ +P+LQ L + GR+ PA A VL +REL Q+ + L + L+
Sbjct: 62 AFAIPILQALLEYVYDSEPKKGRRPDPAFFACVLSPTRELAIQIAEQFEAL--GADISLR 119
Query: 482 AVQLTSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAIS-DSLEILVLDEADL 658
L + AL P ++V TP L D + D S SL+ LVLDEAD
Sbjct: 120 CAVLVGGIDRMQQTIALGKRPHVIVATPG----RLWDHMSDTKGFSLKSLKYLVLDEADR 175
Query: 659 LLSYGYE 679
LL+ +E
Sbjct: 176 LLNEDFE 182
>TAIR9_protein||AT3G22330.1 | Symbols: PMH2 | PMH2 (putative mitochondrial RNA
helicase 2); ATP binding / ATP-dependent helicase/ helicase/ nucleic
acid binding | chr3:7892641-7895145 FORWARD
Length = 617
Score = 95 bits (235), Expect = 4e-020
Identities = 70/228 (30%), Positives = 113/228 (49%), Gaps = 26/228 (11%)
Frame = +2
Query: 89 VEEVEEQRDGGEVAAEEEEEEAEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYI 268
+ E E+R G + E + ELG+ P +++ALS KGIEK PIQ+ +
Sbjct: 85 ISESSERRVG------DSESVGGDGLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPA 138
Query: 269 LEGKDVVARAKTGSGKTLAYLLPLLQKLF---SESGRKKKPAPCAFVLVSSRELCQQVYT 439
+EG+D++ RA+TG+GKTLA+ +P++ K+ ++ GR + P VL +REL +QV
Sbjct: 139 MEGRDMIGRARTGTGKTLAFGIPIIDKIIKYNAKHGRGRN--PLCLVLAPTRELARQVEK 196
Query: 440 EVSWLIELCRVQLKAVQLTSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAIS 619
E L + L P+ L ++ V TP + + G L+ + +
Sbjct: 197 E----FRESAPSLDTICLYGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEV- 251
Query: 620 DSLEILVLDEADLLLSYGY----EII*SR*PPCPKTLPCLLMSATTSS 751
+ +VLDEAD +L G+ EII + P+ ++ SAT S
Sbjct: 252 ---QFVVLDEADQMLQVGFAEDVEIILEK---LPEKRQSMMFSATMPS 293
>TAIR9_protein||AT5G26742.1 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 748
Score = 92 bits (227), Expect = 3e-019
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Frame = +2
Query: 92 EEVEEQRDGGEVAAEEEEEEAEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYIL 271
+E + D V A++ EE A +L L RL +L K+GI PIQ+ + L
Sbjct: 83 DEYDLDGDNNNVEADDGEELA-----ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 137
Query: 272 EGKDVVARAKTGSGKTLAYLLPLLQKLFSESG-----RKKKPAPCAFVLVSSRELCQQVY 436
+G+D++ARAKTG+GKTLA+ +P++++L E+G R+ P VL +REL +QV
Sbjct: 138 QGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVE 197
Query: 437 TEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAI 616
E I+ L V + + + ++AL +++V TP I D + +
Sbjct: 198 KE----IKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRI----IDLIEGRSLK 249
Query: 617 SDSLEILVLDEADLLLSYGYE 679
+E LVLDEAD +L+ G+E
Sbjct: 250 LGEVEYLVLDEADQMLAVGFE 270
>TAIR9_protein||AT5G26742.2 | Symbols: emb1138 | emb1138 (embryo defective
1138); ATP binding / ATP-dependent helicase/ RNA binding / helicase/
nucleic acid binding / zinc ion binding | chr5:9285540-9288871 REVERSE
Length = 749
Score = 92 bits (227), Expect = 3e-019
Identities = 67/201 (33%), Positives = 106/201 (52%), Gaps = 18/201 (8%)
Frame = +2
Query: 92 EEVEEQRDGGEVAAEEEEEEAEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYIL 271
+E + D V A++ EE A +L L RL +L K+GI PIQ+ + L
Sbjct: 83 DEYDLDGDNNNVEADDGEELA-----ISKLSLPQRLEESLEKRGITHLFPIQRAVLVPAL 137
Query: 272 EGKDVVARAKTGSGKTLAYLLPLLQKLFSESG-----RKKKPAPCAFVLVSSRELCQQVY 436
+G+D++ARAKTG+GKTLA+ +P++++L E+G R+ P VL +REL +QV
Sbjct: 138 QGRDIIARAKTGTGKTLAFGIPIIKRLTEEAGDYTAFRRSGRLPKFLVLAPTRELAKQVE 197
Query: 437 TEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAI 616
E I+ L V + + + ++AL +++V TP I D + +
Sbjct: 198 KE----IKESAPYLSTVCVYGGVSYTIQQSALTRGVDVVVGTPGRI----IDLIEGRSLK 249
Query: 617 SDSLEILVLDEADLLLSYGYE 679
+E LVLDEAD +L+ G+E
Sbjct: 250 LGEVEYLVLDEADQMLAVGFE 270
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 92 bits (226), Expect = 4e-019
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 6/172 (3%)
Frame = +2
Query: 164 KSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLL 343
K+FE+ G +++ A+ K+ EKPT IQ A+P +L G+DV+ AKTGSGKT A++LP++
Sbjct: 228 KTFEDCGFSSQIMSAIKKQAYEKPTAIQCQALPIVLSGRDVIGIAKTGSGKTAAFVLPMI 287
Query: 344 QKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMR 523
+ + ++ P + +REL Q++ E + +++ AV M
Sbjct: 288 VHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVY--GGMSKHEQF 345
Query: 524 NALASLPEILVTTPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
L + EI+V TP L D + A LVLDEAD + G+E
Sbjct: 346 KELKAGCEIVVATPG----RLIDMLKMKALTMMRASYLVLDEADRMFDLGFE 393
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 92 bits (226), Expect = 4e-019
Identities = 71/216 (32%), Positives = 96/216 (44%), Gaps = 11/216 (5%)
Frame = +2
Query: 32 KAKVKPVDDVKPEVEEADKVEEVEEQRDGGEVAAEEEEEEAEQDKSFEELGLDPRLIRAL 211
K+ V+P P+V VE +Q EV E A +FE GL P ++R L
Sbjct: 395 KSLVRPHFVTSPDVPHLSPVEIYRKQH---EVTTTGENIPAPY-ITFESSGLPPEILREL 450
Query: 212 SKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSESGRKKKPAPC 391
G PTPIQ P L+ +D+VA AKTGSGKTL YL+P L + P
Sbjct: 451 LSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIPAF-ILLRHCRNDSRNGPT 509
Query: 392 AFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASLPEILVTTPAC 571
+L +REL Q+ E R+ L P L +I+V TP
Sbjct: 510 VLILAPTRELATQIQDEALRFGRSSRISCTC--LYGGAPKGPQLKELERGADIVVATPGR 567
Query: 572 IPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
+ L ++D +S +LVLDEAD +L G+E
Sbjct: 568 LNDILEMKMIDFQQVS----LLVLDEADRMLDMGFE 599
>TAIR9_protein||AT3G22310.1 | Symbols: PMH1, ATRH9 | PMH1 (PUTATIVE
MITOCHONDRIAL RNA HELICASE 1); ATP-dependent helicase/ DNA binding /
RNA binding | chr3:7887382-7889806 FORWARD
Length = 611
Score = 90 bits (222), Expect = 1e-018
Identities = 69/223 (30%), Positives = 110/223 (49%), Gaps = 21/223 (9%)
Frame = +2
Query: 107 QRDGGEVAAEEEEEEAEQD-KSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKD 283
+ DGG +E D + +LG+ P +++AL +GIEK PIQ+ + +EG+D
Sbjct: 96 ENDGGIGDSESVGSSGGGDGLAIADLGISPEIVKALKGRGIEKLFPIQKAVLEPAMEGRD 155
Query: 284 VVARAKTGSGKTLAYLLPLLQKLF---SESGRKKKPAPCAFVLVSSRELCQQVYTEVSWL 454
++ RA+TG+GKTLA+ +P++ K+ ++ GR K P VL +REL +QV E
Sbjct: 156 MIGRARTGTGKTLAFGIPIIDKIIKFNAKHGRGKNPQ--CLVLAPTRELARQVEKE---- 209
Query: 455 IELCRVQLKAVQLTSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAISDSLEI 634
L + L P+ L ++ V TP I + G L+ + + +
Sbjct: 210 FRESAPSLDTICLYGGTPIGQQMRELNYGIDVAVGTPGRIIDLMKRGALNLSEV----QF 265
Query: 635 LVLDEADLLLSYGY----EII*SR*PPCPKTLPCLLMSATTSS 751
+VLDEAD +L G+ EII + P ++ SAT S
Sbjct: 266 VVLDEADQMLQVGFAEDVEIILQK---LPAKRQSMMFSATMPS 305
>TAIR9_protein||AT4G00660.2 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 89 bits (218), Expect = 3e-018
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Frame = +2
Query: 5 RVEASDSMGKAKVKPVDDVKPEVEEADKVE-EVEEQRDGGEVAAEEEEEEAEQDKSFEEL 181
++ +S G A V+ V+ EV + + + + + + E+ A + FE+
Sbjct: 77 QIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDY 136
Query: 182 GLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSE 361
L L+ + +KG E+P+PIQ+ +IP L G+D++ARAK G+GKT A+ +P+L+K+ +
Sbjct: 137 FLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQD 196
Query: 362 SGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASL 541
+ + A ++V +REL Q L + ++Q+ +S+ MR L
Sbjct: 197 NNVIQ-----AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR--LYQP 249
Query: 542 PEILVTTPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
+LV TP I GV + +LV+DEAD LLS ++
Sbjct: 250 VHLLVGTPGRILDLTKKGV----CVLKDCSVLVMDEADKLLSQEFQ 291
>TAIR9_protein||AT4G00660.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr4:274638-277438 FORWARD
Length = 506
Score = 89 bits (218), Expect = 3e-018
Identities = 65/226 (28%), Positives = 113/226 (50%), Gaps = 12/226 (5%)
Frame = +2
Query: 5 RVEASDSMGKAKVKPVDDVKPEVEEADKVE-EVEEQRDGGEVAAEEEEEEAEQDKSFEEL 181
++ +S G A V+ V+ EV + + + + + + E+ A + FE+
Sbjct: 77 QIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTRYRTEDVTATKGNEFEDY 136
Query: 182 GLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSE 361
L L+ + +KG E+P+PIQ+ +IP L G+D++ARAK G+GKT A+ +P+L+K+ +
Sbjct: 137 FLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGTGKTAAFCIPVLEKIDQD 196
Query: 362 SGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMRNALASL 541
+ + A ++V +REL Q L + ++Q+ +S+ MR L
Sbjct: 197 NNVIQ-----AVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIMR--LYQP 249
Query: 542 PEILVTTPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
+LV TP I GV + +LV+DEAD LLS ++
Sbjct: 250 VHLLVGTPGRILDLTKKGV----CVLKDCSVLVMDEADKLLSQEFQ 291
>TAIR9_protein||AT2G45810.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:18859836-18862318 FORWARD
Length = 529
Score = 88 bits (216), Expect = 6e-018
Identities = 61/182 (33%), Positives = 95/182 (52%), Gaps = 11/182 (6%)
Frame = +2
Query: 134 EEEEEEAEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSG 313
+ E+ A + FE+ L L+R + +KG EKP+PIQ+ +IP L G D++ARAK G+G
Sbjct: 144 QTEDVTATKGNEFEDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTG 203
Query: 314 KTLAYLLPLLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQL 493
KT A+ +P L+K+ E+ + A +LV +REL Q L + ++++
Sbjct: 204 KTGAFCIPTLEKIDPENNVIQ-----AVILVPTRELALQTSQVCKELSKYLKIEVMVTTG 258
Query: 494 TSSMPVSAMRNALASLPEILVTTPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYG 673
+S+ MR L +LV TP I GV + +LV+DEAD LLS
Sbjct: 259 GTSLRDDIMR--LYQPVHLLVGTPGRILDLAKKGV----CVLKDCAMLVMDEADKLLSVE 312
Query: 674 YE 679
++
Sbjct: 313 FQ 314
>TAIR9_protein||AT3G01540.2 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 86 bits (212), Expect = 2e-017
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Frame = +2
Query: 167 SFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLP--- 337
SFE G P L+R + G PTPIQ + P ++G+D+VA AKTGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 338 LLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSA 517
LQ++ ++S + P VL +REL Q+ E R+ L P
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 518 MRNALASLPEILVTTPACIPKCLADGVLDPAAIS-DSLEILVLDEADLLLSYGYE 679
L +I+V TP + + +L+ IS + LVLDEAD +L G+E
Sbjct: 273 QLRDLERGADIVVATPGRL-----NDILEMRRISLRQISYLVLDEADRMLDMGFE 322
>TAIR9_protein||AT3G01540.1 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 619
Score = 86 bits (212), Expect = 2e-017
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Frame = +2
Query: 167 SFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLP--- 337
SFE G P L+R + G PTPIQ + P ++G+D+VA AKTGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 338 LLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSA 517
LQ++ ++S + P VL +REL Q+ E R+ L P
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 518 MRNALASLPEILVTTPACIPKCLADGVLDPAAIS-DSLEILVLDEADLLLSYGYE 679
L +I+V TP + + +L+ IS + LVLDEAD +L G+E
Sbjct: 273 QLRDLERGADIVVATPGRL-----NDILEMRRISLRQISYLVLDEADRMLDMGFE 322
>TAIR9_protein||AT3G01540.3 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 86 bits (212), Expect = 2e-017
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Frame = +2
Query: 167 SFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLP--- 337
SFE G P L+R + G PTPIQ + P ++G+D+VA AKTGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 338 LLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSA 517
LQ++ ++S + P VL +REL Q+ E R+ L P
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 518 MRNALASLPEILVTTPACIPKCLADGVLDPAAIS-DSLEILVLDEADLLLSYGYE 679
L +I+V TP + + +L+ IS + LVLDEAD +L G+E
Sbjct: 273 QLRDLERGADIVVATPGRL-----NDILEMRRISLRQISYLVLDEADRMLDMGFE 322
>TAIR9_protein||AT3G01540.4 | Symbols: DRH1, ATDRH1 | DRH1 (DEAD BOX RNA
HELICASE 1); ATP-dependent RNA helicase/ ATPase | chr3:213077-216142
REVERSE
Length = 620
Score = 86 bits (212), Expect = 2e-017
Identities = 62/175 (35%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Frame = +2
Query: 167 SFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLP--- 337
SFE G P L+R + G PTPIQ + P ++G+D+VA AKTGSGKTL YL+P
Sbjct: 159 SFEATGFPPELLREVLSAGFSAPTPIQAQSWPIAMQGRDIVAIAKTGSGKTLGYLIPGFL 218
Query: 338 LLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSA 517
LQ++ ++S + P VL +REL Q+ E R+ L P
Sbjct: 219 HLQRIRNDS----RMGPTILVLSPTRELATQIQEEAVKFGRSSRISCTC--LYGGAPKGP 272
Query: 518 MRNALASLPEILVTTPACIPKCLADGVLDPAAIS-DSLEILVLDEADLLLSYGYE 679
L +I+V TP + + +L+ IS + LVLDEAD +L G+E
Sbjct: 273 QLRDLERGADIVVATPGRL-----NDILEMRRISLRQISYLVLDEADRMLDMGFE 322
>TAIR9_protein||AT1G20920.1 | Symbols: | DEAD box RNA helicase, putative |
chr1:7285342-7288842 FORWARD
Length = 1167
Score = 86 bits (210), Expect = 3e-017
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Frame = +2
Query: 164 KSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLL 343
K + + GL +++ + K EKP PIQ A+P I+ G+D + AKTGSGKTL ++LP+L
Sbjct: 529 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 588
Query: 344 QKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMR 523
+ + + + P V+ +REL QQ+++++ + + ++ V + V+
Sbjct: 589 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSK--PLGIRCVPVYGGSGVAQQI 646
Query: 524 NALASLPEILVTTPACIPK--CLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
+ L EI+V TP + C + G + + LV+DEAD + G+E
Sbjct: 647 SELKRGTEIVVCTPGRMIDILCTSSGKITNLR---RVTFLVMDEADRMFDMGFE 697
>TAIR9_protein||AT1G20920.2 | Symbols: | DEAD box RNA helicase, putative |
chr1:7286356-7288842 FORWARD
Length = 829
Score = 86 bits (210), Expect = 3e-017
Identities = 52/174 (29%), Positives = 91/174 (52%), Gaps = 7/174 (4%)
Frame = +2
Query: 164 KSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLL 343
K + + GL +++ + K EKP PIQ A+P I+ G+D + AKTGSGKTL ++LP+L
Sbjct: 191 KFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPML 250
Query: 344 QKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMR 523
+ + + + P V+ +REL QQ+++++ + + ++ V + V+
Sbjct: 251 RHIKDQPPVEAGDGPIGLVMAPTRELVQQIHSDIRKFSK--PLGIRCVPVYGGSGVAQQI 308
Query: 524 NALASLPEILVTTPACIPK--CLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
+ L EI+V TP + C + G + + LV+DEAD + G+E
Sbjct: 309 SELKRGTEIVVCTPGRMIDILCTSSGKITNLR---RVTFLVMDEADRMFDMGFE 359
>TAIR9_protein||AT3G09620.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr3:2949152-2952205 REVERSE
Length = 990
Score = 85 bits (209), Expect = 4e-017
Identities = 53/172 (30%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Frame = +2
Query: 170 FEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 349
+ + GL +++ L K EKP PIQ A+P I+ G+D + AKTGSGKTL ++LP+L+
Sbjct: 398 WHQTGLTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRH 457
Query: 350 LFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPVSAMRNA 529
+ + + P V+ +REL QQ+Y+++ + + + V + V+ +
Sbjct: 458 IKDQPPVEAGDGPIGLVMAPTRELVQQIYSDIRKFSK--ALGIICVPVYGGSGVAQQISE 515
Query: 530 LASLPEILVTTPACIPK--CLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
L EI+V TP + C + G + + LV+DEAD + G+E
Sbjct: 516 LKRGTEIVVCTPGRMIDILCTSSGKITNLR---RVTYLVMDEADRMFDMGFE 564
>TAIR9_protein||AT5G65900.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:26358328-26361244 FORWARD
Length = 634
Score = 84 bits (207), Expect = 6e-017
Identities = 71/244 (29%), Positives = 121/244 (49%), Gaps = 14/244 (5%)
Frame = +2
Query: 53 DDVKPEVEEADKVEEVEEQRDGGEVAAEEEEEEAEQ-----DKSFEELGLDPRLIRALSK 217
++ +P+ ++ + ++ E + + EV +EEE++ E+ +K+FE L L +++ +
Sbjct: 112 EEEEPKKKKKKQRKDTEAKSEEEEVEDKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKE 171
Query: 218 KGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYLLPLLQKLFSESGRKKKPAPCAF 397
G + T IQ AIP ++ G+DV+ A+TGSGKTLA+L+P ++ L+ +
Sbjct: 172 MGFARMTQIQAKAIPPLMMGEDVLGAARTGSGKTLAFLIPAVELLYRVKFTPRN-GTGVL 230
Query: 398 VLVSSRELCQQVYTEVSWLIELCRVQLKAV-QLTSSMPVSAMRNALASLPEILVTTPACI 574
V+ +REL Q Y EL + + V ++ LA +LV TP +
Sbjct: 231 VICPTRELAIQSYGVAK---ELLKYHSQTVGKVIGGEKRKTEAEILAKGVNLLVATPGRL 287
Query: 575 PKCLADGVLDPAAISDSLEILVLDEADLLLSYGY-EII*SR*PPCPKTLPCLLMSATTSS 751
L + I +L+ LV+DEAD +L + E + PKT L SAT S+
Sbjct: 288 LDHLEN---TNGFIFKNLKFLVMDEADRILEQNFEEDLKKILNLLPKTRQTSLFSATQSA 344
Query: 752 DVEN 763
VE+
Sbjct: 345 KVED 348
>TAIR9_protein||AT3G61240.1 | Symbols: | DEAD/DEAH box helicase, putative
(RH12) | chr3:22666590-22669154 FORWARD
Length = 499
Score = 84 bits (206), Expect = 8e-017
Identities = 59/176 (33%), Positives = 91/176 (51%), Gaps = 11/176 (6%)
Frame = +2
Query: 152 AEQDKSFEELGLDPRLIRALSKKGIEKPTPIQQTAIPYILEGKDVVARAKTGSGKTLAYL 331
A + FE+ L L++ + +KG EKP+PIQ+ +IP L G D++ARAK G+GKT A+
Sbjct: 120 ATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFC 179
Query: 332 LPLLQKLFSESGRKKKPAPCAFVLVSSRELCQQVYTEVSWLIELCRVQLKAVQLTSSMPV 511
+P+L+K+ + + A +LV +REL Q L + +Q+ +S+
Sbjct: 180 IPVLEKIDPNNNVIQ-----AMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRD 234
Query: 512 SAMRNALASLPEILVTTPACIPKCLADGVLDPAAISDSLEILVLDEADLLLSYGYE 679
MR L +LV TP I GV + +LV+DEAD LLS ++
Sbjct: 235 DIMR--LHQPVHLLVGTPGRILDLTKKGV----CVLKDCAMLVMDEADKLLSAEFQ 284
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,112,039,581
Number of Sequences: 33410
Number of Extensions: 28112039581
Number of Successful Extensions: 921724176
Number of sequences better than 0.0: 0
|
