BLASTX 7.6.2
Query= UN62148 /QuerySize=678
(677 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G22330.1 | Symbols: ATTIP49A, RIN1 | RIN1 (RES... 238 3e-063
TAIR9_protein||AT3G49830.1 | Symbols: | DNA helicase-related | ... 99 2e-021
TAIR9_protein||AT5G67630.1 | Symbols: | DNA helicase, putative ... 98 4e-021
>TAIR9_protein||AT5G22330.1 | Symbols: ATTIP49A, RIN1 | RIN1 (RESISTANCE TO
PSEUDOMONAS SYRINGAE PV MACULICOLA INTERACTOR 1); protein binding |
chr5:7391026-7394071 REVERSE
Length = 459
Score = 238 bits (606), Expect = 3e-063
Identities = 120/126 (95%), Positives = 124/126 (98%)
Frame = +1
Query: 295 EEMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRR 474
++MAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRR
Sbjct: 62 KKMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRR 121
Query: 475 AIGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIALKTVKGTKQLKLDPTIYD 654
AIGLRIKETK+VYEGEVTELSPEETESLTGGYGKSISHV+I LKTVKGTK LKLDPTIYD
Sbjct: 122 AIGLRIKETKEVYEGEVTELSPEETESLTGGYGKSISHVVITLKTVKGTKHLKLDPTIYD 181
Query: 655 ALIKEK 672
ALIKEK
Sbjct: 182 ALIKEK 187
Score = 121 bits (301), Expect = 7e-028
Identities = 66/95 (69%), Positives = 70/95 (73%)
Frame = +2
Query: 113 MEKVKIEEIQSTAKKQRIATHTHIKGLGLQPTGIPIPLAAGFVGQLEAREAAGLVVDMIK 292
MEKVKIEEIQSTAKKQRIATHTHIKGLGL+PTGIPI LAAGFVGQLEAREAAGLVVDMIK
Sbjct: 1 MEKVKIEEIQSTAKKQRIATHTHIKGLGLEPTGIPIKLAAGFVGQLEAREAAGLVVDMIK 60
Query: 293 QKKWLARLFCSLVLPVPAKQLWLLEYPKSLEVRFP 397
QKK + P K L + L + P
Sbjct: 61 QKKMAGKALLLAGPPGTGKTALALGISQELGSKVP 95
>TAIR9_protein||AT3G49830.1 | Symbols: | DNA helicase-related |
chr3:18482383-18483940 FORWARD
Length = 474
Score = 99 bits (246), Expect = 2e-021
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 3/125 (2%)
Frame = +1
Query: 298 EMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRA 477
+++G+A+L+AG PGTGK A+A+GI++ LG + PF + GSE++S E+ KTE L + FR+A
Sbjct: 63 KISGRAILIAGQPGTGKIAIAMGIAKSLGQETPFTMIAGSEIFSLEMSKTEALTQAFRKA 122
Query: 478 IGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIALKTVKGTKQLKLDPTIYDA 657
IG+RIKE DV EGEV +S + S G K+ I +KT L + +
Sbjct: 123 IGVRIKEETDVIEGEVVTISIDRPASSGGSVKKTGK---ITMKTTDMESNFDLGWKLIEP 179
Query: 658 LIKEK 672
L KEK
Sbjct: 180 LDKEK 184
Score = 54 bits (128), Expect = 8e-008
Identities = 30/95 (31%), Positives = 50/95 (52%)
Frame = +2
Query: 113 MEKVKIEEIQSTAKKQRIATHTHIKGLGLQPTGIPIPLAAGFVGQLEAREAAGLVVDMIK 292
M ++++ E + + +RI H+HI+GLGL P ++ G VGQ++AR+AAG+ +++I+
Sbjct: 1 MAELRLSETRDLTRIERIGAHSHIRGLGLDSVLEPRAVSEGMVGQIKARKAAGVTLELIR 60
Query: 293 QKKWLARLFCSLVLPVPAKQLWLLEYPKSLEVRFP 397
K R P K + KSL P
Sbjct: 61 DGKISGRAILIAGQPGTGKIAIAMGIAKSLGQETP 95
>TAIR9_protein||AT5G67630.1 | Symbols: | DNA helicase, putative |
chr5:26967535-26969306 REVERSE
Length = 470
Score = 98 bits (243), Expect = 4e-021
Identities = 54/125 (43%), Positives = 82/125 (65%), Gaps = 4/125 (3%)
Frame = +1
Query: 298 EMAGKALLLAGPPGTGKTALALGISQELGSKVPFCPMVGSEVYSSEVKKTEVLMENFRRA 477
++AG+A+L+AG PGTGKTA+A+G+++ LG + PF + GSE++S E+ KTE L ++FR+A
Sbjct: 63 KIAGRAILIAGQPGTGKTAIAMGMAKSLGLETPFAMIAGSEIFSLEMSKTEALTQSFRKA 122
Query: 478 IGLRIKETKDVYEGEVTELSPEETESLTGGYGKSISHVIIALKTVKGTKQLKLDPTIYDA 657
IG+RIKE +V EGEV E+ + S +G KS + +KT + + +A
Sbjct: 123 IGVRIKEETEVIEGEVVEVQIDRPAS-SGVASKSGK---MTMKTTDMETVYDMGAKMIEA 178
Query: 658 LIKEK 672
L KEK
Sbjct: 179 LNKEK 183
Score = 59 bits (142), Expect = 2e-009
Identities = 32/95 (33%), Positives = 52/95 (54%)
Frame = +2
Query: 113 MEKVKIEEIQSTAKKQRIATHTHIKGLGLQPTGIPIPLAAGFVGQLEAREAAGLVVDMIK 292
M ++K+ E + + +RI H+HI+GLGL P ++ G VGQ++AR+AAG+++ MI+
Sbjct: 1 MAELKLSESRDLTRVERIGAHSHIRGLGLDSALEPRAVSEGMVGQVKARKAAGVILQMIR 60
Query: 293 QKKWLARLFCSLVLPVPAKQLWLLEYPKSLEVRFP 397
+ K R P K + KSL + P
Sbjct: 61 EGKIAGRAILIAGQPGTGKTAIAMGMAKSLGLETP 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,112,039,581
Number of Sequences: 33410
Number of Extensions: 28112039581
Number of Successful Extensions: 921724176
Number of sequences better than 0.0: 0
|