BLASTX 7.6.2
Query= UN62151 /QuerySize=812
(811 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor S... 309 2e-083
sp|O80770|SPT52_ARATH Putative transcription elongation factor S... 215 5e-055
sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Ga... 92 5e-018
sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Ho... 91 6e-018
sp|Q5R405|SPT5H_PONAB Transcription elongation factor SPT5 OS=Po... 91 6e-018
sp|O55201|SPT5H_MOUSE Transcription elongation factor SPT5 OS=Mu... 91 1e-017
sp|Q9DDT5|SPT5H_DANRE Transcription elongation factor SPT5 OS=Da... 89 3e-017
sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Dr... 71 9e-012
sp|Q21338|SPT5H_CAEEL Transcription elongation factor SPT5 OS=Ca... 54 1e-006
>sp|Q9STN3|SPT51_ARATH Putative transcription elongation factor SPT5 homolog 1
OS=Arabidopsis thaliana GN=At4g08350 PE=1 SV=1
Length = 1054
Score = 309 bits (790), Expect = 2e-083
Identities = 142/151 (94%), Positives = 143/151 (94%), Gaps = 1/151 (0%)
Frame = +1
Query: 343 DTSRYSMGSETPMHLSRTPLHPYMTPRRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDN 522
DTSRYSMGSETPMH SRTPLHPYMTP RDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDN
Sbjct: 781 DTSRYSMGSETPMHPSRTPLHPYMTPMRDSGATPIHDGMRTPMRDRAWNPYTPMSPPRDN 840
Query: 523 WEEGNPGSWGTSPNYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDSGSAYANAPS 702
WE+GNPGSWGTSP YQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRD GSAYANAPS
Sbjct: 841 WEDGNPGSWGTSPQYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDHGSAYANAPS 900
Query: 703 LYLPSTPGQPMTPSSASYLPGTP-GDTMTPG 792
YLPSTPGQPMTPSSASYLPGTP G MTPG
Sbjct: 901 PYLPSTPGQPMTPSSASYLPGTPGGQPMTPG 931
Score = 82 bits (200), Expect = 5e-015
Identities = 40/41 (97%), Positives = 41/41 (100%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELEMKIVT 291
DDSLLGTTVKIRLGPFKGYRGPVVEVKG+SVRVELEMKIVT
Sbjct: 699 DDSLLGTTVKIRLGPFKGYRGPVVEVKGNSVRVELEMKIVT 739
>sp|O80770|SPT52_ARATH Putative transcription elongation factor SPT5 homolog 2
OS=Arabidopsis thaliana GN=At2g34210 PE=2 SV=1
Length = 990
Score = 215 bits (545), Expect = 5e-055
Identities = 125/222 (56%), Positives = 145/222 (65%), Gaps = 11/222 (4%)
Frame = +1
Query: 154 RHREEDDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELEMKIVT----VDRNAISDNV 321
R R DD L+GT VKIRLGPFKGY G +VEVK VRVELE KIVT +R AISD
Sbjct: 677 RGRRGDDHLVGTYVKIRLGPFKGYSGRLVEVKDKLVRVELEAKIVTGKLHFERKAISD-- 734
Query: 322 AVTTPSRDTSRYSMGSETPMHLSRTPLHPYMTPRRDSGATPIHDGMRTPMRDRAWNPYTP 501
+T T +Y+MGS+TPMH SRTPLHP MTP R SGATPIHDGMRTPMR RAWNPY P
Sbjct: 735 -MTDNVVATPQYNMGSQTPMHPSRTPLHPCMTPMRHSGATPIHDGMRTPMRGRAWNPYMP 793
Query: 502 MSPPRDNWEEGNPGSWGTSPNYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAGTPRDSGS 681
MSPPRDNWE+GNPGSWGTSP Y+ +P S + + TPG + G+ + G
Sbjct: 794 MSPPRDNWEDGNPGSWGTSP-YEAATPGS-DWGSSTPGRS-SYRDAGTPINNGFVYYLLC 850
Query: 682 AYANAPSLYLP-STPGQPMTPSSASYLPGTPGDTMTPGLVSM 804
ANAPS P ST P TP + PGT D M+ +V++
Sbjct: 851 LNANAPSPMTPSSTSYLPTTPGGQAMTPGTDLDVMSLDIVNI 892
>sp|Q5ZI08|SPT5H_CHICK Transcription elongation factor SPT5 OS=Gallus gallus
GN=SUPT5H PE=2 SV=1
Length = 1079
Score = 92 bits (226), Expect = 5e-018
Identities = 74/216 (34%), Positives = 100/216 (46%), Gaps = 26/216 (12%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELE--MKIVTVDRNAIS---------- 312
D+ L+G TV+I GP+KGY G V + + RVEL + ++VDR ++
Sbjct: 694 DNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGM 753
Query: 313 DNVAVTTP--SRDTSRYSMGSETPMHLSRTPLHPYMTPRRDSGATPIHDGMRTPMRDRAW 486
+ TP T Y GS TPM+ S+TPLH TP+HDG RTP + AW
Sbjct: 754 TSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPAQSGAW 813
Query: 487 NPYTPMSPPR--DNWEEGNPGSWGTSPNYQPGSPPSRAYEAPTPGSGWASTPGGSYSDAG 660
+P P +P R +++E G SP G+P + P P S + P + G
Sbjct: 814 DPNNPNTPSRADEDFEYGFDDEPTPSPQGYGGTPNPQTPGYPDPSSPQVTQPYNPQT-PG 872
Query: 661 TP----RDSGSAYANAPSLYLPSTPGQPMTPSSASY 756
TP D S YA PS P QP +PS SY
Sbjct: 873 TPAMYNTDQFSPYA-VPS---PQGSYQP-SPSPQSY 903
>sp|O00267|SPT5H_HUMAN Transcription elongation factor SPT5 OS=Homo sapiens
GN=SUPT5H PE=1 SV=1
Length = 1087
Score = 91 bits (225), Expect = 6e-018
Identities = 79/222 (35%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELE--MKIVTVDRNAISDNVAVTTPSR 342
D+ L+G TV+I GP+KGY G V + + RVEL + ++VDR ++ V P
Sbjct: 702 DNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLT-TVGSRRPGG 760
Query: 343 DTSRYS----MGSETPMH--LSRTPLHPYMTPRRD-------SGATPIHDGMRTPMRDRA 483
TS Y GS+TPM+ SRTP++ TP +D TP+HDG RTP + A
Sbjct: 761 MTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGA 820
Query: 484 WNPYTPMSPPR---------DNWEEGNPGSWGTSPNYQ-PGSP-PSRAYEAPTPGSGWAS 630
W+P P +P R D+ +P ++G +PN Q PG P PS P
Sbjct: 821 WDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPG 880
Query: 631 TPGGSYSDAGTPRDSGSAYANAPSLYLPSTPGQPMTPSSASY 756
TP +D +P YA APS P QP +PS SY
Sbjct: 881 TPAMYNTDQFSP------YA-APS---PQGSYQP-SPSPQSY 911
>sp|Q5R405|SPT5H_PONAB Transcription elongation factor SPT5 OS=Pongo abelii
GN=SUPT5H PE=2 SV=1
Length = 1083
Score = 91 bits (225), Expect = 6e-018
Identities = 79/222 (35%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELE--MKIVTVDRNAISDNVAVTTPSR 342
D+ L+G TV+I GP+KGY G V + + RVEL + ++VDR ++ V P
Sbjct: 698 DNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLT-TVGSRRPGG 756
Query: 343 DTSRYS----MGSETPMH--LSRTPLHPYMTPRRD-------SGATPIHDGMRTPMRDRA 483
TS Y GS+TPM+ SRTP++ TP +D TP+HDG RTP + A
Sbjct: 757 MTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGA 816
Query: 484 WNPYTPMSPPR---------DNWEEGNPGSWGTSPNYQ-PGSP-PSRAYEAPTPGSGWAS 630
W+P P +P R D+ +P ++G +PN Q PG P PS P
Sbjct: 817 WDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPG 876
Query: 631 TPGGSYSDAGTPRDSGSAYANAPSLYLPSTPGQPMTPSSASY 756
TP +D +P YA APS P QP +PS SY
Sbjct: 877 TPAMYNTDQFSP------YA-APS---PQGSYQP-SPSPQSY 907
>sp|O55201|SPT5H_MOUSE Transcription elongation factor SPT5 OS=Mus musculus
GN=Supt5h PE=1 SV=1
Length = 1082
Score = 91 bits (223), Expect = 1e-017
Identities = 79/222 (35%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELE--MKIVTVDRNAISDNVAVTTPSR 342
D+ L+G TV+I GP+KGY G V + + RVEL + ++VDR ++ V P
Sbjct: 696 DNELIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLT-TVDSQRPGG 754
Query: 343 DTSRYS----MGSETPMH--LSRTPLHPYMTPRRD-------SGATPIHDGMRTPMRDRA 483
TS Y GS+TPM+ SRTP++ TP +D TP+HDG RTP + A
Sbjct: 755 MTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGA 814
Query: 484 WNPYTPMSPPR---------DNWEEGNPGSWGTSPNYQ-PGSP-PSRAYEAPTPGSGWAS 630
W+P P +P R D+ +P ++G +PN Q PG P PS P
Sbjct: 815 WDPNNPNTPSRAEEEYEYAFDDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPG 874
Query: 631 TPGGSYSDAGTPRDSGSAYANAPSLYLPSTPGQPMTPSSASY 756
TP +D +P YA APS P QP +PS SY
Sbjct: 875 TPAMYNTDQFSP------YA-APS---PQGSYQP-SPSPQSY 905
>sp|Q9DDT5|SPT5H_DANRE Transcription elongation factor SPT5 OS=Danio rerio
GN=supt5h PE=1 SV=1
Length = 1084
Score = 89 bits (219), Expect = 3e-017
Identities = 60/172 (34%), Positives = 84/172 (48%), Gaps = 29/172 (16%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVELE--MKIVTVDRNAIS---------- 312
D+ L+G TV+I GP+KGY G V + + RVEL + ++VDR ++
Sbjct: 700 DNDLIGQTVRISQGPYKGYIGVVKDATESTARVELHSTCQTISVDRQRLTTVGGKERQGR 759
Query: 313 DNVAVTTP--SRDTSRYSMGSETPMHLSRTPLHPYMTPRRDSGATPIHDGMRTPMRDRAW 486
+ + TP T Y GS TPM+ S+TPLH TP+HDG RTP + AW
Sbjct: 760 SSTHLRTPMYGSQTPIYGTGSRTPMYGSQTPLHDGSRTPHYGSQTPLHDGSRTPGQSGAW 819
Query: 487 NPYTPMSPPR---------DNWEEGNPGSWGTSPNYQ-PGSPPSRAYEAPTP 612
+P P +P R D+ +P +G +PN Q PG P E P+P
Sbjct: 820 DPNNPNTPSRPDDEYEFAYDDEPSPSPQGYGGTPNPQTPGYP-----EVPSP 866
>sp|Q9V460|SPT5H_DROME Transcription elongation factor SPT5 OS=Drosophila
melanogaster GN=Spt5 PE=1 SV=1
Length = 1078
Score = 71 bits (172), Expect = 9e-012
Identities = 66/200 (33%), Positives = 89/200 (44%), Gaps = 17/200 (8%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVEL--EMKIVTVDRNAISDNVAVTTPSR 342
D +LG T+KI GP+KG G V + + RVEL + ++VDRN I+ V VT
Sbjct: 738 DREILGKTIKISGGPYKGAVGIVKDATESTARVELHTSCQTISVDRNHIA-IVGVTGKEG 796
Query: 343 DTSRYSMGSETPMHLSRTPLHPYMTPRRDSGA--TPIHDGMRTPMRDR-AWNPYTPMSPP 513
S Y TP +RTP + TP + TP+ G +TP D PY M+P
Sbjct: 797 SVSTY---GRTP---ARTPGYGAQTPSYTAAGSKTPL-VGSQTPNWDTDTRTPYGTMTPS 849
Query: 514 RDNWEEGNPGSWGTSPNYQPGSPPSRAY--EAPTPGSGW-ASTPGGSYSDAGTPRDSGSA 684
D G+W + N P Y E P+P G+ STPG + P+ G+
Sbjct: 850 HDGSMTPRHGAWDPTANTTPARNNDFDYSLEEPSPSPGYNPSTPGYQMTSQFAPQTPGTL 909
Query: 685 YANAPSLYLPSTPGQPMTPS 744
Y + S Y P P PS
Sbjct: 910 YGSDRS-YSPFNPSPSPAPS 928
>sp|Q21338|SPT5H_CAEEL Transcription elongation factor SPT5 OS=Caenorhabditis
elegans GN=spt-5 PE=2 SV=3
Length = 1208
Score = 54 bits (127), Expect = 1e-006
Identities = 59/213 (27%), Positives = 89/213 (41%), Gaps = 22/213 (10%)
Frame = +1
Query: 169 DDSLLGTTVKIRLGPFKGYRGPVVEVKGDSVRVEL--EMKIVTVDRNAIS--DNVAVTTP 336
D +L+G V+I GP KG+ G V + D+VRVEL + + ++VDR + + +T
Sbjct: 728 DLTLIGKNVRIIKGPMKGHFGIVRDATEDTVRVELHTQCRTISVDRARVMVVGDTGITAG 787
Query: 337 SRDTSRYSMGSETPMHLS-RTPLHPYMTPRRDSGATPIHDGMRTPMRDRAWNPYTPMSPP 513
S S + S+TPM S +TP++ TP TP++ G TP D P
Sbjct: 788 SGGGSSFYSSSKTPMRDSGKTPMYGSKTPMY-GAQTPMY-GSMTPAYDGGRTP------- 838
Query: 514 RDNWEEGNPGSWGTSPNYQPGSPPSRAYEAPTPGSGWASTPG-GSYSDAGTPRDSGS--- 681
E G ++G+ + P G+ + TP GS A TP +
Sbjct: 839 -AYGEGGRTPAYGSKTPAYGDLDEHSSSRTPAYGNDSSRTPAYGSADGARTPAYGSTEGG 897
Query: 682 ---AYANAPSLYLPSTPGQPMTPSSASYLPGTP 771
AY + + P+ TP S TP
Sbjct: 898 RTPAYGSMDNSRTPAYDDSGRTPGYESMPSRTP 930
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,453,981,912
Number of Sequences: 518415
Number of Extensions: 215453981912
Number of Successful Extensions: 1318477742
Number of sequences better than 0.0: 0
|
