BLASTX 7.6.2
Query= UN62252 /QuerySize=607
(606 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G12840.2 | Symbols: HAP2A, ATHAP2A, NF-YA1 | N... 141 3e-034
TAIR9_protein||AT5G12840.4 | Symbols: HAP2A, ATHAP2A, NF-YA1 | N... 141 3e-034
TAIR9_protein||AT5G12840.1 | Symbols: HAP2A, EMB2220, ATHAP2A, N... 115 3e-026
TAIR9_protein||AT5G12840.3 | Symbols: HAP2A, ATHAP2A, NF-YA1 | N... 115 3e-026
>TAIR9_protein||AT5G12840.2 | Symbols: HAP2A, ATHAP2A, NF-YA1 | NF-YA1 (NUCLEAR
FACTOR Y, SUBUNIT A1); transcription factor | chr5:4051147-4052961
REVERSE
Length = 272
Score = 141 bits (355), Expect = 3e-034
Identities = 85/143 (59%), Positives = 90/143 (62%), Gaps = 31/143 (21%)
Frame = +2
Query: 233 MQSKSGEGNEEEVNQQSDQQQQQQQQQPMMMYPDPWWKNNSFGGGGCVLPQETP---PSN 403
MQSK G NEEEVN QQ MMY +PWWKNNSFG V+PQ P PSN
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQP-------MMYAEPWWKNNSFG----VVPQARPSGIPSN 49
Query: 404 SN-----GESESNDVHSPSEDG-----GDGPCKDSQAATSSSPLDNHGVEGNDPT----- 538
S+ SESNDVHS SEDG DG KDSQAATSS DNHG+EGNDP
Sbjct: 50 SSSLDCPNGSESNDVHSASEDGALNGENDGTWKDSQAATSSRS-DNHGMEGNDPALSIRN 108
Query: 539 -HDQQIVQPPELVGHYIACVPNP 604
HDQ +VQPPELVGHYIACVPNP
Sbjct: 109 MHDQPLVQPPELVGHYIACVPNP 131
>TAIR9_protein||AT5G12840.4 | Symbols: HAP2A, ATHAP2A, NF-YA1 | NF-YA1 (NUCLEAR
FACTOR Y, SUBUNIT A1); transcription factor | chr5:4051147-4052961
REVERSE
Length = 272
Score = 141 bits (355), Expect = 3e-034
Identities = 85/143 (59%), Positives = 90/143 (62%), Gaps = 31/143 (21%)
Frame = +2
Query: 233 MQSKSGEGNEEEVNQQSDQQQQQQQQQPMMMYPDPWWKNNSFGGGGCVLPQETP---PSN 403
MQSK G NEEEVN QQ MMY +PWWKNNSFG V+PQ P PSN
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQP-------MMYAEPWWKNNSFG----VVPQARPSGIPSN 49
Query: 404 SN-----GESESNDVHSPSEDG-----GDGPCKDSQAATSSSPLDNHGVEGNDPT----- 538
S+ SESNDVHS SEDG DG KDSQAATSS DNHG+EGNDP
Sbjct: 50 SSSLDCPNGSESNDVHSASEDGALNGENDGTWKDSQAATSSRS-DNHGMEGNDPALSIRN 108
Query: 539 -HDQQIVQPPELVGHYIACVPNP 604
HDQ +VQPPELVGHYIACVPNP
Sbjct: 109 MHDQPLVQPPELVGHYIACVPNP 131
>TAIR9_protein||AT5G12840.1 | Symbols: HAP2A, EMB2220, ATHAP2A, NF-YA1 | NF-YA1
(NUCLEAR FACTOR Y, SUBUNIT A1); transcription factor |
chr5:4051147-4052961 REVERSE
Length = 273
Score = 115 bits (286), Expect = 3e-026
Identities = 68/135 (50%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Frame = +2
Query: 233 MQSKSGEGNEEEVNQQSDQQQQQQQQQPMMMYPDPWWKNNSFGGGGCVLPQETPPSNSNG 412
MQSK G NEEEVN QQ +P + G +P + +
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSG---IPSNSSSLDCPN 57
Query: 413 ESESNDVHSPSEDG-----GDGPCKDSQAATSSSPLDNHGVEGNDPT------HDQQIVQ 559
SESNDVHS SEDG DG KDSQAATSS +DNHG+EGNDP HDQ +VQ
Sbjct: 58 GSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQ 117
Query: 560 PPELVGHYIACVPNP 604
PPELVGHYIACVPNP
Sbjct: 118 PPELVGHYIACVPNP 132
>TAIR9_protein||AT5G12840.3 | Symbols: HAP2A, ATHAP2A, NF-YA1 | NF-YA1 (NUCLEAR
FACTOR Y, SUBUNIT A1); transcription factor | chr5:4051147-4052961
REVERSE
Length = 273
Score = 115 bits (286), Expect = 3e-026
Identities = 68/135 (50%), Positives = 76/135 (56%), Gaps = 14/135 (10%)
Frame = +2
Query: 233 MQSKSGEGNEEEVNQQSDQQQQQQQQQPMMMYPDPWWKNNSFGGGGCVLPQETPPSNSNG 412
MQSK G NEEEVN QQ +P + G +P + +
Sbjct: 1 MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSG---IPSNSSSLDCPN 57
Query: 413 ESESNDVHSPSEDG-----GDGPCKDSQAATSSSPLDNHGVEGNDPT------HDQQIVQ 559
SESNDVHS SEDG DG KDSQAATSS +DNHG+EGNDP HDQ +VQ
Sbjct: 58 GSESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQ 117
Query: 560 PPELVGHYIACVPNP 604
PPELVGHYIACVPNP
Sbjct: 118 PPELVGHYIACVPNP 132
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,156,225,293
Number of Sequences: 33410
Number of Extensions: 28156225293
Number of Successful Extensions: 921779657
Number of sequences better than 0.0: 0
|
