BLASTX 7.6.2
Query= UN62275 /QuerySize=606
(605 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein... 163 1e-038
gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [... 163 2e-038
gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT... 163 2e-038
gi|255627589|gb|ACU14139.1| unknown [Glycine max] 162 4e-038
gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT... 159 2e-037
gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein... 158 5e-037
gi|212722680|ref|NP_001131392.1| hypothetical protein LOC1001927... 158 6e-037
gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare ... 158 6e-037
gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein... 157 1e-036
gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa ... 156 2e-036
gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japo... 156 2e-036
gi|224098796|ref|XP_002311269.1| predicted protein [Populus tric... 156 2e-036
gi|224112373|ref|XP_002316168.1| predicted protein [Populus tric... 156 2e-036
gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT... 156 3e-036
gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana] 155 4e-036
gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryz... 155 5e-036
gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein... 155 5e-036
gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrel... 154 9e-036
gi|115458068|ref|NP_001052634.1| Os04g0388900 [Oryza sativa Japo... 154 1e-035
gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis] 153 3e-035
>gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 163 bits (412), Expect = 1e-038
Identities = 80/90 (88%), Positives = 82/90 (91%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRGRPVVVKLNSGVDYRG L CLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGVEEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYISTVN +ADGA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTVNMTVADGA 91
>gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [Arabidopsis
thaliana]
Length = 91
Score = 163 bits (411), Expect = 2e-038
Identities = 79/90 (87%), Positives = 82/90 (91%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRGRPV+VKLNSGVDYRG L CLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGVGEKVSGTTKTPADFLKSIRGRPVIVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYISTVN +ADGA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTVNMTVADGA 91
>gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT_486445
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 163 bits (411), Expect = 2e-038
Identities = 80/90 (88%), Positives = 82/90 (91%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRGRPVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGVGEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYISTV +ADGA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTVKMTVADGA 91
>gi|255627589|gb|ACU14139.1| unknown [Glycine max]
Length = 91
Score = 162 bits (408), Expect = 4e-038
Identities = 80/90 (88%), Positives = 81/90 (90%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SG K GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGTGKAGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYIST LA+GA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91
>gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 159 bits (402), Expect = 2e-037
Identities = 77/90 (85%), Positives = 81/90 (90%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAF+RGNNVLYIST L+DGA
Sbjct: 62 QLKNKYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative
[Ricinus communis]
Length = 91
Score = 158 bits (399), Expect = 5e-037
Identities = 79/90 (87%), Positives = 80/90 (88%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SG + TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYIST LADGA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTTKRTLADGA 91
>gi|212722680|ref|NP_001131392.1| hypothetical protein LOC100192719 [Zea mays]
Length = 95
Score = 158 bits (398), Expect = 6e-037
Identities = 80/95 (84%), Positives = 82/95 (86%), Gaps = 2/95 (2%)
Frame = +3
Query: 90 MSGSGVNK--VTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE 263
MS G +K GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE
Sbjct: 1 MSSGGADKPGSGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE 60
Query: 264 EYVNGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
EYVNGQLKNKYGDAFIRGNNVLYIST LADGA
Sbjct: 61 EYVNGQLKNKYGDAFIRGNNVLYISTTKRTLADGA 95
>gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 99
Score = 158 bits (398), Expect = 6e-037
Identities = 80/92 (86%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
Frame = +3
Query: 93 SGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 272
SGSG GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
Sbjct: 9 SGSG-GGGAGGPVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 67
Query: 273 NGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
NGQLKNKYGDAFIRGNNVLYIST PL DGA
Sbjct: 68 NGQLKNKYGDAFIRGNNVLYISTSKRPLTDGA 99
>gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 157 bits (396), Expect = 1e-036
Identities = 76/90 (84%), Positives = 80/90 (88%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKN YGDAF+RGNNVLYIST L+DGA
Sbjct: 62 QLKNTYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica
Group]
Length = 101
Score = 156 bits (394), Expect = 2e-036
Identities = 78/92 (84%), Positives = 79/92 (85%)
Frame = +3
Query: 93 SGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 272
SG G GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
Sbjct: 10 SGGGGGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 69
Query: 273 NGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
NGQLKNKYGDAFIRGNNVLYIST L DGA
Sbjct: 70 NGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 101
>gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japonica Group]
Length = 96
Score = 156 bits (394), Expect = 2e-036
Identities = 78/92 (84%), Positives = 79/92 (85%)
Frame = +3
Query: 93 SGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 272
SG G GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
Sbjct: 5 SGGGGGGGGGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 64
Query: 273 NGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
NGQLKNKYGDAFIRGNNVLYIST L DGA
Sbjct: 65 NGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 96
>gi|224098796|ref|XP_002311269.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 156 bits (394), Expect = 2e-036
Identities = 80/89 (89%), Gaps = 5/89 (5%)
Frame = +3
Query: 117 TGG-----TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 281
TGG TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ
Sbjct: 3 TGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 62
Query: 282 LKNKYGDAFIRGNNVLYISTVNTPLADGA 368
LKNKYGDAFIRGNNVLYIST LADGA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTSKRTLADGA 91
>gi|224112373|ref|XP_002316168.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 156 bits (393), Expect = 2e-036
Identities = 77/81 (95%)
Frame = +3
Query: 126 TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 305
TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA
Sbjct: 11 TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70
Query: 306 FIRGNNVLYISTVNTPLADGA 368
FIRGNNVLYIST LADGA
Sbjct: 71 FIRGNNVLYISTSKRTLADGA 91
>gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920
[Sorghum bicolor]
Length = 97
Score = 156 bits (392), Expect = 3e-036
Identities = 79/92 (85%), Positives = 80/92 (86%), Gaps = 5/92 (5%)
Frame = +3
Query: 93 SGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 272
SGSG GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
Sbjct: 11 SGSG-----GGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 65
Query: 273 NGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
NGQLKNKYGDAFIRGNNVLYIST L DGA
Sbjct: 66 NGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 97
>gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana]
Length = 91
Score = 155 bits (391), Expect = 4e-036
Identities = 75/90 (83%), Positives = 79/90 (87%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SGV + GTTKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQ EEYVNG
Sbjct: 2 SGVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQAEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKN YGDAF+RGNNVLYIST L+DGA
Sbjct: 62 QLKNTYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica
Group]
Length = 97
Score = 155 bits (390), Expect = 5e-036
Identities = 79/92 (85%), Positives = 80/92 (86%), Gaps = 2/92 (2%)
Frame = +3
Query: 93 SGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 272
SGSG GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV
Sbjct: 8 SGSGGG--GGGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYV 65
Query: 273 NGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
NGQLKNKYGDAFIRGNNVLYIST L DGA
Sbjct: 66 NGQLKNKYGDAFIRGNNVLYISTSKRTLTDGA 97
>gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 91
Score = 155 bits (390), Expect = 5e-036
Identities = 79/89 (88%), Positives = 80/89 (89%), Gaps = 5/89 (5%)
Frame = +3
Query: 117 TGG-----TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 281
TGG TTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ
Sbjct: 3 TGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQ 62
Query: 282 LKNKYGDAFIRGNNVLYISTVNTPLADGA 368
LKNKYGDAFIRGNNVLYIST LA+GA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTSKRTLAEGA 91
>gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 91
Score = 154 bits (388), Expect = 9e-036
Identities = 75/91 (82%), Positives = 79/91 (86%)
Frame = +3
Query: 90 MSGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEY 269
M+G V+ G+ KTPADFLKSIRGRPVVVKLNSGVDYRG+LACLDGYMNIAMEQTEEY
Sbjct: 1 MTGDSVSAQPTGSAKTPADFLKSIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEY 60
Query: 270 VNGQLKNKYGDAFIRGNNVLYISTVNTPLAD 362
VNGQLKNKYGDAFIRGNNVLYIST L D
Sbjct: 61 VNGQLKNKYGDAFIRGNNVLYISTTKRTLGD 91
>gi|115458068|ref|NP_001052634.1| Os04g0388900 [Oryza sativa Japonica Group]
Length = 97
Score = 154 bits (387), Expect = 1e-035
Identities = 78/95 (82%), Positives = 79/95 (83%), Gaps = 5/95 (5%)
Frame = +3
Query: 84 DKMSGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE 263
DK G G GG KTP+DFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE
Sbjct: 8 DKSGGGG-----GGAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTE 62
Query: 264 EYVNGQLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
EYVNGQLKNKYGDAFIRGNNVLYIST L D A
Sbjct: 63 EYVNGQLKNKYGDAFIRGNNVLYISTSKRTLTDDA 97
>gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis]
Length = 91
Score = 153 bits (384), Expect = 3e-035
Identities = 76/90 (84%), Positives = 78/90 (86%)
Frame = +3
Query: 99 SGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 278
SG G + KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 2 SGGGSGGGASAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 61
Query: 279 QLKNKYGDAFIRGNNVLYISTVNTPLADGA 368
QLKNKYGDAFIRGNNVLYIST L +GA
Sbjct: 62 QLKNKYGDAFIRGNNVLYISTSKRSLGEGA 91
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,222,136,337,158
Number of Sequences: 15229318
Number of Extensions: 6222136337158
Number of Successful Extensions: 1478471888
Number of sequences better than 0.0: 0
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