BLASTX 7.6.2
Query= UN62275 /QuerySize=606
(605 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS... 136 2e-031
sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS... 136 2e-031
sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS... 113 9e-025
sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS... 113 1e-024
sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS... 107 9e-023
sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6 OS... 105 3e-022
sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protei... 105 3e-022
sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS... 101 6e-021
sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS... 100 8e-021
sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS... 96 2e-019
sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS... 96 2e-019
sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS... 96 2e-019
sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS... 94 6e-019
sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS... 93 1e-018
sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS... 92 2e-018
sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS... 88 3e-017
sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS... 86 2e-016
sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS... 84 5e-016
sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS... 84 6e-016
sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS... 82 3e-015
>sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens
GN=LSM6 PE=1 SV=1
Length = 80
Score = 136 bits (340), Expect = 2e-031
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
+TP+DFLK I GRPVVVKLNSGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 312 RGNNVLYIST 341
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus
GN=Lsm6 PE=2 SV=1
Length = 80
Score = 136 bits (340), Expect = 2e-031
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
+TP+DFLK I GRPVVVKLNSGVDYRG+LACLDGYMNIA+EQTEEYVNGQLKNKYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 312 RGNNVLYIST 341
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=LSM6 PE=3 SV=2
Length = 95
Score = 113 bits (282), Expect = 9e-025
Identities = 54/70 (77%), Positives = 62/70 (88%)
Frame = +3
Query: 129 TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 308
T +P DFLK + G+ VVV+L SGVDYRGIL+CLDGYMNIAMEQTEE VNG++ N+YGDAF
Sbjct: 21 TGSPTDFLKGVVGKRVVVRLLSGVDYRGILSCLDGYMNIAMEQTEESVNGKVVNRYGDAF 80
Query: 309 IRGNNVLYIS 338
IRGNNVLYIS
Sbjct: 81 IRGNNVLYIS 90
>sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS=Laccaria
bicolor (strain S238N-H82) GN=LSM6 PE=3 SV=1
Length = 99
Score = 113 bits (281), Expect = 1e-024
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = +3
Query: 129 TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 308
T +P DFLK + G+ V+V+L SGVDYRG+L+CLDGYMNIA+EQTEE+VNG + N+YGDAF
Sbjct: 25 TGSPTDFLKGVVGKRVIVRLTSGVDYRGLLSCLDGYMNIALEQTEEHVNGVVTNRYGDAF 84
Query: 309 IRGNNVLYIS 338
IRGNNVLYIS
Sbjct: 85 IRGNNVLYIS 94
>sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS=Ustilago
maydis GN=LSM6 PE=3 SV=2
Length = 85
Score = 107 bits (265), Expect = 9e-023
Identities = 48/70 (68%), Positives = 60/70 (85%)
Frame = +3
Query: 135 TPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 314
+P DFLK + G+ V V+LNSG+DYRG+L+CLDGYMNIA+EQT EYV+G KN YGDAFIR
Sbjct: 14 SPNDFLKGVIGKNVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGIKKNSYGDAFIR 73
Query: 315 GNNVLYISTV 344
GNNV+YI+ +
Sbjct: 74 GNNVMYITAL 83
>sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6
OS=Schizosaccharomyces pombe GN=lsm6 PE=2 SV=1
Length = 75
Score = 105 bits (261), Expect = 3e-022
Identities = 45/71 (63%), Positives = 62/71 (87%)
Frame = +3
Query: 135 TPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 314
+P +FL + G+ V+++L+SGVDY+GIL+CLDGYMN+A+E+TEEYVNG+ N YGDAFIR
Sbjct: 4 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIR 63
Query: 315 GNNVLYISTVN 347
GNNVLY+S ++
Sbjct: 64 GNNVLYVSALD 74
>sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protein LSm6
OS=Dictyostelium discoideum GN=lsm6 PE=3 SV=1
Length = 88
Score = 105 bits (260), Expect = 3e-022
Identities = 50/74 (67%), Positives = 57/74 (77%)
Frame = +3
Query: 117 TGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKY 296
T + +F K GRPVVVKLN+GV+YRGIL +DG MNI MEQTEEY+NGQLK KY
Sbjct: 10 TSNNSNAQFNFFKMCIGRPVVVKLNNGVEYRGILEVVDGNMNIVMEQTEEYLNGQLKTKY 69
Query: 297 GDAFIRGNNVLYIS 338
GD F+RGNNVLYIS
Sbjct: 70 GDCFLRGNNVLYIS 83
>sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS=Chaetomium
globosum GN=LSM6 PE=3 SV=2
Length = 82
Score = 101 bits (249), Expect = 6e-021
Identities = 48/74 (64%), Positives = 56/74 (75%)
Frame = +3
Query: 117 TGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKY 296
T G K P+ FL I G PV VKLNSGV Y+G L +DGYMNIA+E+TEEYVNG + Y
Sbjct: 7 TQGEGKDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVNGAKRRSY 66
Query: 297 GDAFIRGNNVLYIS 338
GDAF+RGNNV+YIS
Sbjct: 67 GDAFVRGNNVMYIS 80
>sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=LSM6 PE=3 SV=1
Length = 80
Score = 100 bits (248), Expect = 8e-021
Identities = 47/69 (68%), Positives = 56/69 (81%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
K P+ FL I G PV VKLNSGV Y+G L +DGYMNIA+E+TEEYV+G+L+ YGDAF+
Sbjct: 10 KDPSAFLSEITGAPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVDGKLRRSYGDAFV 69
Query: 312 RGNNVLYIS 338
RGNNVLYIS
Sbjct: 70 RGNNVLYIS 78
>sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
fumigatus GN=lsm6 PE=3 SV=2
Length = 80
Score = 96 bits (237), Expect = 2e-019
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
+ P+ FL I G PV VKLNSGV Y+G L +DGYMNIA+E++EE+V+G+LK YGDAFI
Sbjct: 10 RDPSAFLGEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALERSEEFVDGKLKRSYGDAFI 69
Query: 312 RGNNVLYIS 338
RGNNVLYIS
Sbjct: 70 RGNNVLYIS 78
>sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=lsm6
PE=3 SV=2
Length = 80
Score = 96 bits (237), Expect = 2e-019
Identities = 46/69 (66%), Positives = 56/69 (81%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
+ P+ FL I G PV VKLNSGV YRG L +DGYMNIA+E++EE+V+G+L+ YGDAFI
Sbjct: 10 RDPSAFLGEIIGAPVTVKLNSGVVYRGELQSVDGYMNIALERSEEFVDGKLRRSYGDAFI 69
Query: 312 RGNNVLYIS 338
RGNNVLYIS
Sbjct: 70 RGNNVLYIS 78
>sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS=Neurospora
crassa GN=lsm-6 PE=3 SV=2
Length = 82
Score = 96 bits (237), Expect = 2e-019
Identities = 44/69 (63%), Positives = 54/69 (78%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
K P+ FL I G PV VKLNSGV Y+G L +DGYMNIA+E+TEE++NG + YGDAF+
Sbjct: 12 KDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEFINGVKRRSYGDAFV 71
Query: 312 RGNNVLYIS 338
RGNNV+YIS
Sbjct: 72 RGNNVMYIS 80
>sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS=Coccidioides
immitis GN=LSM6 PE=3 SV=1
Length = 80
Score = 94 bits (232), Expect = 6e-019
Identities = 43/70 (61%), Positives = 55/70 (78%)
Frame = +3
Query: 129 TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAF 308
++ P+ FL I G V VKLNSGV Y+G L +DGYMNIA+E+T+E+VNG+L+ YGD F
Sbjct: 9 SQDPSAFLSGITGASVTVKLNSGVVYKGELQSIDGYMNIALEKTQEFVNGKLRKSYGDVF 68
Query: 309 IRGNNVLYIS 338
+RGNNVLYIS
Sbjct: 69 VRGNNVLYIS 78
>sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
clavatus GN=lsm6 PE=3 SV=2
Length = 78
Score = 93 bits (230), Expect = 1e-018
Identities = 43/69 (62%), Positives = 56/69 (81%)
Frame = +3
Query: 132 KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFI 311
+ P+ FL I G PV VKLNSGV Y+G L +DGYMNIA+EQ++E+++G+L+ YGDAFI
Sbjct: 9 RDPSAFLSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQSKEFMDGKLRRSYGDAFI 68
Query: 312 RGNNVLYIS 338
RGNNVLYI+
Sbjct: 69 RGNNVLYIA 77
>sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS=Magnaporthe
grisea GN=LSM6 PE=3 SV=1
Length = 83
Score = 92 bits (227), Expect = 2e-018
Identities = 45/75 (60%), Positives = 54/75 (72%)
Frame = +3
Query: 114 VTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNK 293
+T G K P FL I G V VKLNSGV Y+G L +DGYMNIA+E+ EE+V GQ K
Sbjct: 6 MTQGEGKDPTSFLGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRS 65
Query: 294 YGDAFIRGNNVLYIS 338
YGDAF+RGNNV+YI+
Sbjct: 66 YGDAFVRGNNVMYIA 80
>sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS=Cryptococcus
neoformans GN=LSM6 PE=3 SV=1
Length = 88
Score = 88 bits (217), Expect = 3e-017
Identities = 39/70 (55%), Positives = 53/70 (75%)
Frame = +3
Query: 135 TPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDAFIR 314
+P++FL++I G+ V V++ SGVDY G+L CLDGYMN+A+EQ EE+ YGD F+R
Sbjct: 16 SPSEFLRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLR 75
Query: 315 GNNVLYISTV 344
GNNVLYIS +
Sbjct: 76 GNNVLYISAL 85
>sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS=Phaeosphaeria
nodorum GN=LSM6 PE=3 SV=2
Length = 89
Score = 86 bits (211), Expect = 2e-016
Identities = 40/75 (53%), Positives = 53/75 (70%)
Frame = +3
Query: 123 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 302
G ++ P+ FL I G PV VKLNSG+ Y+G L +DGYMNIA+E+ +E G++ +GD
Sbjct: 14 GDSRDPSGFLSEIIGAPVTVKLNSGIVYKGDLQSVDGYMNIALERCKEVAEGRVIRNWGD 73
Query: 303 AFIRGNNVLYISTVN 347
AF+RGNNV YIS N
Sbjct: 74 AFVRGNNVTYISADN 88
>sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS=Botryotinia
fuckeliana (strain B05.10) GN=lsm6 PE=3 SV=2
Length = 85
Score = 84 bits (207), Expect = 5e-016
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = +3
Query: 123 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 302
G K P+ FL I G V+VKLN+ + ++G L +DGYMNIA+E+ EE+V+G+ K +GD
Sbjct: 9 GEGKDPSSFLSEIIGSKVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 303 AFIRGNNVLYIS 338
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=lsm6 PE=3 SV=2
Length = 85
Score = 84 bits (206), Expect = 6e-016
Identities = 39/72 (54%), Positives = 54/72 (75%)
Frame = +3
Query: 123 GTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 302
G K P+ FL I G V+VKLN+ + ++G L +DGYMNIA+E+ EE+V+G+ K +GD
Sbjct: 9 GEGKDPSSFLSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 303 AFIRGNNVLYIS 338
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS=Debaryomyces
hansenii GN=LSM6 PE=3 SV=2
Length = 85
Score = 82 bits (200), Expect = 3e-015
Identities = 40/83 (48%), Positives = 52/83 (62%)
Frame = +3
Query: 90 MSGSGVNKVTGGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEY 269
MS +G P+ FL I G V V+L++GV+Y G L +DGYMNI +++T+E+
Sbjct: 1 MSSIKKESSSGSENTGPSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEF 60
Query: 270 VNGQLKNKYGDAFIRGNNVLYIS 338
V G YGD FIRGNNVLYIS
Sbjct: 61 VGGDQARNYGDVFIRGNNVLYIS 83
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,991,697,678
Number of Sequences: 518415
Number of Extensions: 215991697678
Number of Successful Extensions: 1324424465
Number of sequences better than 0.0: 0
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