BLASTX 7.6.2
Query= UN62298 /QuerySize=566
(565 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea] 199 3e-049
gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 p... 133 2e-029
gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thal... 125 4e-027
gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidop... 125 4e-027
gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 p... 86 2e-015
gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidop... 81 6e-014
gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a pol... 81 6e-014
gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana] 81 6e-014
gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT... 75 3e-012
gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryz... 72 5e-011
gi|224068502|ref|XP_002326133.1| predicted protein [Populus tric... 70 1e-010
gi|224142779|ref|XP_002324728.1| predicted protein [Populus tric... 70 2e-010
gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ri... 68 6e-010
gi|225444665|ref|XP_002277239.1| PREDICTED: hypothetical protein... 65 5e-009
gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 ... 65 6e-009
gi|226492991|ref|NP_001140630.1| hypothetical protein LOC1002727... 58 8e-007
gi|326489917|dbj|BAJ94032.1| predicted protein [Hordeum vulgare ... 58 8e-007
gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare ... 58 8e-007
gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT... 57 1e-006
gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT... 57 1e-006
>gi|126009432|gb|ABM30197.2| polygalacturonase [Brassica juncea]
Length = 278
Score = 199 bits (504), Expect = 3e-049
Identities = 99/114 (86%), Positives = 105/114 (92%), Gaps = 3/114 (2%)
Frame = +2
Query: 233 MVEPLPITRRRFLSSHRSLVTVFWIAAFASLFIWQSRGR---GGSSSLYRVNGGLSSVFW 403
MVEPLPITRRRFLSSH+SLVTVFWIAAFASLFIWQSRGR GG +SLYRVNG LSSVFW
Sbjct: 1 MVEPLPITRRRFLSSHKSLVTVFWIAAFASLFIWQSRGRGGGGGGASLYRVNGSLSSVFW 60
Query: 404 WTATTLPTTTAAGEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
WTATT T++ AGEFPRLRP +FNLTDFGAVGDGVTVNTEAFERAVYAISK+SK
Sbjct: 61 WTATTTTTSSDAGEFPRLRPVSFNLTDFGAVGDGVTVNTEAFERAVYAISKLSK 114
>gi|297818750|ref|XP_002877258.1| glycoside hydrolase family 28 protein
[Arabidopsis lyrata subsp. lyrata]
Length = 487
Score = 133 bits (333), Expect = 2e-029
Identities = 74/107 (69%), Positives = 84/107 (78%), Gaps = 11/107 (10%)
Frame = +2
Query: 242 PLPITRRRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSSLYRVNGGLSSVFWWTATTL 421
PLP RRFLSSH+SLVTVFWIA FASLFIWQ G S++LY SVFW ++TT
Sbjct: 4 PLP---RRFLSSHKSLVTVFWIATFASLFIWQF--GGVSTNLYTG----FSVFWSSSTT- 53
Query: 422 PTTTAAGEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVS 562
TT A+GEFP+LRP FNLTDFGAVGDGVTVNTEAFERA+Y ISK++
Sbjct: 54 -TTAASGEFPKLRPVVFNLTDFGAVGDGVTVNTEAFERAIYKISKLA 99
>gi|23506093|gb|AAN28906.1| At3g42950/F18P9_110 [Arabidopsis thaliana]
Length = 484
Score = 125 bits (313), Expect = 4e-027
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 7/102 (6%)
Frame = +2
Query: 260 RRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSSLYRVNGGLSSVFWWTATTLPTTTAA 439
RRFLSSH+SL+TVFWIA FASLFIWQ G S++LY G S +W++++ TT +
Sbjct: 3 RRFLSSHKSLITVFWIATFASLFIWQF--GGVSTNLY---SGFS--LFWSSSSTTTTVFS 55
Query: 440 GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
G FP+LRP FNLTDFGAVGDGVT+NTEAFE+A+Y ISK++K
Sbjct: 56 GGFPKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAK 97
>gi|15229188|ref|NP_189881.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 484
Score = 125 bits (313), Expect = 4e-027
Identities = 64/102 (62%), Positives = 80/102 (78%), Gaps = 7/102 (6%)
Frame = +2
Query: 260 RRFLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSSLYRVNGGLSSVFWWTATTLPTTTAA 439
RRFLSSH+SL+TVFWIA FASLFIWQ G S++LY G S +W++++ TT +
Sbjct: 3 RRFLSSHKSLITVFWIATFASLFIWQF--GGVSTNLY---SGFS--LFWSSSSTTTTVFS 55
Query: 440 GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
G FP+LRP FNLTDFGAVGDGVT+NTEAFE+A+Y ISK++K
Sbjct: 56 GGFPKLRPVVFNLTDFGAVGDGVTINTEAFEKAIYKISKLAK 97
>gi|297844882|ref|XP_002890322.1| glycoside hydrolase family 28 protein
[Arabidopsis lyrata subsp. lyrata]
Length = 506
Score = 86 bits (212), Expect = 2e-015
Identities = 49/102 (48%), Positives = 62/102 (60%), Gaps = 11/102 (10%)
Frame = +2
Query: 266 FLSSHRSLVTVFWIAAFASLFIWQSRG--RGGSSSLYRVNGGLSSVFWWTATTLPTTTAA 439
FL+SH++L T WI AF S+F+WQ GGS + GG ++F P
Sbjct: 26 FLASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGA--GPIGGKFTIFGKIKPIQP----- 78
Query: 440 GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
PRLRP F+L DFG VGDGVT+NTEAFERAV +ISK+ +
Sbjct: 79 --LPRLRPVVFDLKDFGGVGDGVTLNTEAFERAVISISKLER 118
>gi|15221958|ref|NP_173351.1| Pectin lyase-like protein [Arabidopsis thaliana]
Length = 506
Score = 81 bits (199), Expect = 6e-014
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 11/99 (11%)
Frame = +2
Query: 269 LSSHRSLVTVFWIAAFASLFIWQSRG--RGGSSSLYRVNGGLSSVFWWTATTLPTTTAAG 442
L+SH++L T WI AF S+F+WQ GGS + GG ++F P
Sbjct: 27 LASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT--GPVGGKFTIFGKIKPIQP------ 78
Query: 443 EFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKV 559
PRLRP F+L DFG VGDG T+NTEAFERAV +ISK+
Sbjct: 79 -IPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKL 116
>gi|8954055|gb|AAF82228.1|AC069143_4 Contains similarity to a
polygalacturonase-like protein gi|7529266 from Arabidopsis thaliana BAC
F18P9 gb|AL138654 and contains multiple polygalacturonase (pectinase)
PF|00295 domains
Length = 533
Score = 81 bits (199), Expect = 6e-014
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 11/99 (11%)
Frame = +2
Query: 269 LSSHRSLVTVFWIAAFASLFIWQSRG--RGGSSSLYRVNGGLSSVFWWTATTLPTTTAAG 442
L+SH++L T WI AF S+F+WQ GGS + GG ++F P
Sbjct: 27 LASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT--GPVGGKFTIFGKIKPIQP------ 78
Query: 443 EFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKV 559
PRLRP F+L DFG VGDG T+NTEAFERAV +ISK+
Sbjct: 79 -IPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKL 116
>gi|19698861|gb|AAL91166.1| unknown protein [Arabidopsis thaliana]
Length = 506
Score = 81 bits (199), Expect = 6e-014
Identities = 47/99 (47%), Positives = 59/99 (59%), Gaps = 11/99 (11%)
Frame = +2
Query: 269 LSSHRSLVTVFWIAAFASLFIWQSRG--RGGSSSLYRVNGGLSSVFWWTATTLPTTTAAG 442
L+SH++L T WI AF S+F+WQ GGS + GG ++F P
Sbjct: 27 LASHKTLFTFLWITAFGSVFLWQRTAYIEGGSGT--GPVGGKFTIFGKIKPIQP------ 78
Query: 443 EFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKV 559
PRLRP F+L DFG VGDG T+NTEAFERAV +ISK+
Sbjct: 79 -IPRLRPVVFDLKDFGGVGDGFTLNTEAFERAVISISKL 116
>gi|242063272|ref|XP_002452925.1| hypothetical protein SORBIDRAFT_04g035020
[Sorghum bicolor]
Length = 500
Score = 75 bits (184), Expect = 3e-012
Identities = 43/102 (42%), Positives = 62/102 (60%), Gaps = 8/102 (7%)
Frame = +2
Query: 266 FLSSHRSLVTVFWIAAFASLFIWQSRGR--GGSSSLYRVNGGLSSVFWWTATTLPTTTAA 439
F++++++L+ W+ FA +F+WQS G + + GG + +A P A
Sbjct: 18 FVAANKALLAAAWVVGFALVFLWQSASMSFGSAGAGGAAGGGFLRLL--SAPPPPPRPA- 74
Query: 440 GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
PRLRP A+NLTDFGAVGDG VNTEAFERAV I+ +++
Sbjct: 75 ---PRLRPTAYNLTDFGAVGDGRAVNTEAFERAVETIAALAE 113
>gi|125541363|gb|EAY87758.1| hypothetical protein OsI_09176 [Oryza sativa Indica
Group]
Length = 545
Score = 72 bits (174), Expect = 5e-011
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 7/100 (7%)
Frame = +2
Query: 266 FLSSHRSLVTVFWIAAFASLFIWQSRGRGGSSSLYRVNGGLSSVFWWTATTLPTTTAAGE 445
FL+++++L+ W+ F +F+WQ S+ V GG + + P +
Sbjct: 23 FLAANKTLLAAAWVVGFTLVFLWQ-------SAKVSVGGGGGGGGFLRLRSAPPPPPSRP 75
Query: 446 FPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
P LRP A+ LTDFG VGDG VNTEAFERAV AI+ +++
Sbjct: 76 APLLRPKAYELTDFGGVGDGRAVNTEAFERAVKAIAALAE 115
>gi|224068502|ref|XP_002326133.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 70 bits (171), Expect = 1e-010
Identities = 39/65 (60%), Positives = 43/65 (66%), Gaps = 6/65 (9%)
Frame = +2
Query: 389 SSVFWWTATTLPTTTAA------GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAI 550
+SVF W + A P+LRP AFNLTDFGAVGDG TVNTEAFERAV AI
Sbjct: 44 ASVFLWKRNPVGAGLAVFWRGPLRPMPQLRPVAFNLTDFGAVGDGATVNTEAFERAVSAI 103
Query: 551 SKVSK 565
SK+SK
Sbjct: 104 SKLSK 108
>gi|224142779|ref|XP_002324728.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 70 bits (169), Expect = 2e-010
Identities = 38/65 (58%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Frame = +2
Query: 389 SSVFWWTATTLPTTTAA------GEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAI 550
+SVF W + AA P+LRP AFNLTDFGAVGDGVT+NTEAFERAV AI
Sbjct: 44 ASVFLWQRNAVRGGFAAFWHGPVRPIPKLRPVAFNLTDFGAVGDGVTLNTEAFERAVSAI 103
Query: 551 SKVSK 565
SK+++
Sbjct: 104 SKLAR 108
>gi|255550387|ref|XP_002516244.1| polygalacturonase, putative [Ricinus
communis]
Length = 494
Score = 68 bits (165), Expect = 6e-010
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
P+LRP AFNLTDFG VGDGVT+NTEAFERAV AISK+ K
Sbjct: 69 PKLRPVAFNLTDFGGVGDGVTLNTEAFERAVLAISKLGK 107
>gi|225444665|ref|XP_002277239.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 493
Score = 65 bits (157), Expect = 5e-009
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +2
Query: 389 SSVFWWTATTLP-----TTTAAGEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAIS 553
+SVF W + A PRLRP +NLTDFG VGD VTVNTEAFERA+ AIS
Sbjct: 43 ASVFVWQRNIVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDSVTVNTEAFERAISAIS 102
Query: 554 KVSK 565
K+ K
Sbjct: 103 KLGK 106
>gi|147795580|emb|CAN69988.1| hypothetical protein VITISV_024399 [Vitis
vinifera]
Length = 509
Score = 65 bits (156), Expect = 6e-009
Identities = 35/64 (54%), Positives = 40/64 (62%), Gaps = 5/64 (7%)
Frame = +2
Query: 389 SSVFWWTATTLP-----TTTAAGEFPRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAIS 553
+SVF W + A PRLRP +NLTDFG VGD VTVNTEAFERA+ AIS
Sbjct: 43 ASVFVWQRNIVEGLLTFRRAPARPLPRLRPAVYNLTDFGGVGDXVTVNTEAFERAISAIS 102
Query: 554 KVSK 565
K+ K
Sbjct: 103 KLGK 106
>gi|226492991|ref|NP_001140630.1| hypothetical protein LOC100272705 [Zea mays]
Length = 495
Score = 58 bits (138), Expect = 8e-007
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVSK 565
PRLRP A+N+TDFGAVGDG VNT AFERAV AI+ +++
Sbjct: 70 PRLRPTAYNITDFGAVGDGRAVNTAAFERAVEAIAALAE 108
>gi|326489917|dbj|BAJ94032.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 158
Score = 58 bits (138), Expect = 8e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAIS 553
PRLRP A+NLTDFG VGDG TVNT AFERAV I+
Sbjct: 70 PRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETIT 104
>gi|326517826|dbj|BAK03831.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 495
Score = 58 bits (138), Expect = 8e-007
Identities = 27/35 (77%), Positives = 29/35 (82%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAIS 553
PRLRP A+NLTDFG VGDG TVNT AFERAV I+
Sbjct: 70 PRLRPMAYNLTDFGGVGDGRTVNTRAFERAVETIT 104
>gi|302823943|ref|XP_002993619.1| hypothetical protein SELMODRAFT_137353
[Selaginella moellendorffii]
Length = 468
Score = 57 bits (137), Expect = 1e-006
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVS 562
PRLRP FNLTDFG +GDG T+NT AFERAV IS +
Sbjct: 44 PRLRPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAA 81
>gi|302783324|ref|XP_002973435.1| hypothetical protein SELMODRAFT_99190
[Selaginella moellendorffii]
Length = 468
Score = 57 bits (137), Expect = 1e-006
Identities = 26/38 (68%), Positives = 29/38 (76%)
Frame = +2
Query: 449 PRLRPFAFNLTDFGAVGDGVTVNTEAFERAVYAISKVS 562
PRLRP FNLTDFG +GDG T+NT AFERAV IS +
Sbjct: 44 PRLRPVVFNLTDFGGIGDGRTINTRAFERAVAEISSAA 81
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,222,136,337,158
Number of Sequences: 15229318
Number of Extensions: 6222136337158
Number of Successful Extensions: 1478471888
Number of sequences better than 0.0: 0
|
