BLASTX 7.6.2
Query= UN62310 /QuerySize=795
(794 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q56XE4|Q56XE4_ARATH Putative C-type U1 snRNP OS=Arabidopsis t... 346 2e-093
tr|Q84VV2|Q84VV2_ARATH At4g03120 OS=Arabidopsis thaliana GN=At4g... 344 8e-093
tr|B9S3X9|B9S3X9_RICCO U1 small nuclear ribonucleoprotein C, put... 210 1e-052
tr|C5XYW4|C5XYW4_SORBI Putative uncharacterized protein Sb04g028... 209 3e-052
tr|Q9ZR19|Q9ZR19_ARATH Putative C-type U1 snRNP OS=Arabidopsis t... 201 1e-049
tr|Q53U41|Q53U41_SOLLC Similar to u1 small nuclear ribonucleopro... 199 4e-049
tr|B9GWP7|B9GWP7_POPTR Predicted protein OS=Populus trichocarpa ... 198 5e-049
tr|Q6ETX3|Q6ETX3_ORYSJ Os02g0266100 protein OS=Oryza sativa subs... 198 5e-049
tr|B4FBY0|B4FBY0_MAIZE Putative uncharacterized protein OS=Zea m... 195 6e-048
tr|C5XZK6|C5XZK6_SORBI Putative uncharacterized protein Sb04g009... 186 3e-045
tr|D5A7U4|D5A7U4_PICSI Putative uncharacterized protein OS=Picea... 180 2e-043
tr|A2X383|A2X383_ORYSI Putative uncharacterized protein OS=Oryza... 178 6e-043
tr|C0HE38|C0HE38_MAIZE Putative uncharacterized protein OS=Zea m... 169 3e-040
tr|A9T2K5|A9T2K5_PHYPA Predicted protein OS=Physcomitrella paten... 159 3e-037
tr|A8XW44|A8XW44_CAEBR U1 small nuclear ribonucleoprotein C OS=C... 120 2e-025
tr|P90815|P90815_CAEEL U1 small nuclear ribonucleoprotein C OS=C... 114 1e-023
tr|Q5TAL4|Q5TAL4_HUMAN U1 small nuclear ribonucleoprotein C OS=H... 112 4e-023
tr|A7SEP9|A7SEP9_NEMVE Predicted protein OS=Nematostella vectens... 109 4e-022
tr|C4WXR0|C4WXR0_ACYPI ACYPI001217 protein OS=Acyrthosiphon pisu... 107 2e-021
tr|C1MKH9|C1MKH9_9CHLO U1 small nuclear ribonucleoprotein C prot... 106 3e-021
>tr|Q56XE4|Q56XE4_ARATH Putative C-type U1 snRNP OS=Arabidopsis thaliana
GN=At4g03120 PE=1 SV=1
Length = 207
Score = 346 bits (886), Expect = 2e-093
Identities = 170/214 (79%), Positives = 172/214 (80%), Gaps = 29/214 (13%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLARPRLPMM----PMPMGMRPPVLPRPMMPGQGYMPPPGVPQMMA 405
Y QVG FNQHMLARPR PMM MPMGMRPPVLPRPMMP QGYMPPPGVPQMMA
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQGYMPPPGVPQMMA 120
Query: 406 PPGAPLPPPPQNGMLR-------------PPGMAPLPGQGGGPPPNYNGLPLPPPPPYQT 546
PPGAPLPPPPQNG+LR PPGMAP+PGQGGGPPPNYNG LPPPPPY T
Sbjct: 121 PPGAPLPPPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNG--LPPPPPYHT 178
Query: 547 NPAAAAAAAPPSGGFNNPNL-----GGESPESNE 633
NP AAPPSG FNNPNL ESPESNE
Sbjct: 179 NP-----AAPPSGNFNNPNLNNPNPSAESPESNE 207
>tr|Q84VV2|Q84VV2_ARATH At4g03120 OS=Arabidopsis thaliana GN=At4g03120 PE=2
SV=1
Length = 207
Score = 344 bits (881), Expect = 8e-093
Identities = 169/214 (78%), Positives = 172/214 (80%), Gaps = 29/214 (13%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIY+QQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYHQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLARPRLPMM----PMPMGMRPPVLPRPMMPGQGYMPPPGVPQMMA 405
Y QVG FNQHMLARPR PMM MPMGMRPPVLPRPMMP QGYMPPPGVPQMMA
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQGYMPPPGVPQMMA 120
Query: 406 PPGAPLPPPPQNGMLR-------------PPGMAPLPGQGGGPPPNYNGLPLPPPPPYQT 546
PPGAPLPPPPQNG+LR PPGMAP+PGQGGGPPPNYNG LPPPPPY T
Sbjct: 121 PPGAPLPPPPQNGILRPPGMAPIPGQGGGPPGMAPIPGQGGGPPPNYNG--LPPPPPYHT 178
Query: 547 NPAAAAAAAPPSGGFNNPNL-----GGESPESNE 633
NP AAPPSG FNNPNL ESPESNE
Sbjct: 179 NP-----AAPPSGNFNNPNLNNPNPSAESPESNE 207
>tr|B9S3X9|B9S3X9_RICCO U1 small nuclear ribonucleoprotein C, putative
OS=Ricinus communis GN=RCOM_0556840 PE=4 SV=1
Length = 206
Score = 210 bits (534), Expect = 1e-052
Identities = 111/180 (61%), Positives = 123/180 (68%), Gaps = 13/180 (7%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRSYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLARPRLPMMPMPMGMRP--PVLP--RPMMPGQGYMPPPGVPQMMA 405
AAA+ QVG A+NQH+L RPRLP++P PM P LP P+MP G PPP +P+ +
Sbjct: 61 AAAFQQVGAAYNQHLLQRPRLPVLPTPMMPIPGSAQLPANTPLMP--GIRPPPVLPRPVP 118
Query: 406 PPGAPLPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPPPPYQTNPAAAAAAAPPSG 585
+ P M+ PPG LPGQ NGLP PP +AA APPSG
Sbjct: 119 AAPGYMSSPAMPPMVAPPGAPSLPGQ-------VNGLPRPPMSIPPATVPGSAAVAPPSG 171
>tr|C5XYW4|C5XYW4_SORBI Putative uncharacterized protein Sb04g028260 OS=Sorghum
bicolor GN=Sb04g028260 PE=4 SV=1
Length = 228
Score = 209 bits (531), Expect = 3e-052
Identities = 121/204 (59%), Positives = 129/204 (63%), Gaps = 31/204 (15%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHML------ARPRLPMMPMP------------MGMRPPVLPRPMMPG 363
AAA+ Q G FNQHML ARPRLP++P P G+RPP+LP P +PG
Sbjct: 61 AAAF-QAGAPFNQHMLAFPGAVARPRLPILPTPGMPHGFPQAPLMPGVRPPILPAPGVPG 119
Query: 364 QGYMPPPGVPQMMAPPGAPLPPPPQNGMLRPPGMAPLPG-QGGGPPPNYNGLPLPP--PP 534
PG P M PGAP PQ G PPG P PG G P LP PP PP
Sbjct: 120 Y-----PGAPPTMPQPGAPPGSMPQPG--APPGSMPQPGAPPGSMPMQMAPLPRPPTLPP 172
Query: 535 PYQTNPAAAA--AAAPPSGGFNNP 600
P P A +AAPP+ NP
Sbjct: 173 PTSGVPGAPIPNSAAPPAIYQANP 196
>tr|Q9ZR19|Q9ZR19_ARATH Putative C-type U1 snRNP OS=Arabidopsis thaliana
GN=F4C21.4 PE=2 SV=1
Length = 112
Score = 201 bits (509), Expect = 1e-049
Identities = 95/108 (87%), Gaps = 4/108 (3%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLARPRLPMM----PMPMGMRPPVLPRPMMPGQG 369
Y QVG FNQHMLARPR PMM MPMGMRPPVLPRPMMP QG
Sbjct: 61 TGGYQQVGAVFNQHMLARPRPPMMLPPGSMPMGMRPPVLPRPMMPPQG 108
>tr|Q53U41|Q53U41_SOLLC Similar to u1 small nuclear ribonucleoprotein C
OS=Solanum lycopersicum PE=2 SV=1
Length = 197
Score = 199 bits (504), Expect = 4e-049
Identities = 110/207 (53%), Positives = 126/207 (60%), Gaps = 25/207 (12%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHK NVR YYQQFE Q QSLIDQ++KEHLG
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKGNVRTYYQQFEAQLNQSLIDQKVKEHLG- 59
Query: 238 AAAYNQVGGAFNQHMLARPRLPMMPMPM--------------GMRPPVLPRPMMPGQGYM 375
A+ VG F Q P LP PM M GMRPPVLPRPM GY
Sbjct: 60 --AFRPVGLPFPQLRPGLPGLPTPPMQMPGNPQMPAGAQWVPGMRPPVLPRPMPGLPGYA 117
Query: 376 PPPGVPQMMAPPGAPLPPPPQNGMLRPPG-MAPLPGQGGGPPPNYNGLPLPPPPPYQTNP 552
PPP +PQM+APPGAP+ P N M RP G + +PG G P P PPP YQ
Sbjct: 118 PPP-MPQMLAPPGAPM-PGQVNNMQRPAGPPSAVPGSMGMPAPTGGPPMFAPPPVYQ--- 172
Query: 553 AAAAAAAPPSGGFNNPNLGGESPESNE 633
+ P +GG +N + ++ +SN+
Sbjct: 173 --GSTTVPTTGGVDNSSTNAQAADSNQ 197
>tr|B9GWP7|B9GWP7_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_712203 PE=4 SV=1
Length = 202
Score = 198 bits (503), Expect = 5e-049
Identities = 110/185 (59%), Positives = 125/185 (67%), Gaps = 22/185 (11%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQS+IDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSIIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQH-MLARPRLPMMPMPMGMRPPVLP-----RPMMPGQGYMPPPGVPQM 399
AA+ QVG A+NQH M+ RPRLP++P PV+P P+ PG M PP +P+
Sbjct: 61 TAAFQQVGAAYNQHLMVQRPRLPVLP------TPVMPIGGNNAPLFPG---MRPPVLPRP 111
Query: 400 MAPPGAP--LPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPPPPYQTNPAAAAAAA 573
M PGAP + PP M+ PPG LPGQ G P + P P + AA +
Sbjct: 112 M--PGAPGYMNPPMMPPMMAPPGAPSLPGQMNGIPRPPTMIAQPNVP---GSTAAPTPSG 166
Query: 574 PPSGG 588
PPS G
Sbjct: 167 PPSMG 171
>tr|Q6ETX3|Q6ETX3_ORYSJ Os02g0266100 protein OS=Oryza sativa subsp. japonica
GN=P0006C08.31 PE=2 SV=1
Length = 228
Score = 198 bits (503), Expect = 5e-049
Identities = 119/199 (59%), Positives = 132/199 (66%), Gaps = 26/199 (13%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLA------RPRLPMMP---MPMGMRPPVLPRPMMPG--QGYMPPP 384
AAA+ QVG FNQH+L+ RPRLP++P MP+G+ P V P+MPG +P P
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTPGMPLGV-PQVPGAPLMPGVRPPILPAP 118
Query: 385 GVPQMMAPPGAP-LPPPPQNGMLRPPGMAPLPGQ--GGGPPPNYNGLPLPP--PPPYQTN 549
G+P PGAP +P PQ G PPG P PG G P LP PP PPP
Sbjct: 119 GIP---GYPGAPNVPTMPQTG--APPGSMP-PGSMPPGSMPMQMAPLPRPPTLPPPTSGA 172
Query: 550 PAAAA--AAAPPSGGFNNP 600
P A + APP+ NP
Sbjct: 173 PGAPIPNSGAPPAMYQTNP 191
>tr|B4FBY0|B4FBY0_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 228
Score = 195 bits (494), Expect = 6e-048
Identities = 113/193 (58%), Positives = 120/193 (62%), Gaps = 23/193 (11%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHML------ARPRLPMMP---MPMGMRPPVLPRPMMPGQGYMPP--- 381
AAA+ Q G FNQH+L ARPRLP++P MP G P P+MP G PP
Sbjct: 61 AAAF-QAGAPFNQHLLAFPGAMARPRLPILPTPGMPHGF-PQAPGAPLMP--GIRPPILP 116
Query: 382 ----PGVPQMMAPPGAPLPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPPPPYQTN 549
PG P M PGAP PQ G PPG P PG G P PLP PP
Sbjct: 117 APGYPGPPPTMQQPGAPPGSMPQPG--APPGSMPQPGAPPGSMP-MQMAPLPRPPTLPPP 173
Query: 550 PAAAAAAAPPSGG 588
+ A P+ G
Sbjct: 174 TSGVPGAPIPNSG 186
>tr|C5XZK6|C5XZK6_SORBI Putative uncharacterized protein Sb04g009880 OS=Sorghum
bicolor GN=Sb04g009880 PE=4 SV=1
Length = 231
Score = 186 bits (471), Expect = 3e-045
Identities = 108/183 (59%), Positives = 114/183 (62%), Gaps = 19/183 (10%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHML------ARPRLPMMPMPMGMRPPVLPRPMMPGQGYMPPPGVPQM 399
AAA+ Q G FNQHML ARPRLP++P P GM P PG MP P +
Sbjct: 61 AAAF-QAGAPFNQHMLTFPGAVARPRLPILPTP-GMPHGF---PQAPGAPLMPGVRPPIL 115
Query: 400 MAP--PGAPLPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPPPPYQTNPAAAAAAA 573
AP PG P PP PPG P P G PP +P P PP A
Sbjct: 116 PAPGIPGYPGGPPTMLQPGAPPGSMPQP---GAPP---GSMPQPGAPPGSMPMQMAPLPR 169
Query: 574 PPS 582
PP+
Sbjct: 170 PPT 172
>tr|D5A7U4|D5A7U4_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 244
Score = 180 bits (455), Expect = 2e-043
Identities = 108/207 (52%), Positives = 123/207 (59%), Gaps = 31/207 (14%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQR+KEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRAYYQQFEEQQTQSLIDQRVKEHLGQ 60
Query: 238 AAAY-NQVGGAFNQHMLA------RPRLPMMPMPMGMRPPVLPRP---MMPGQGYMPPPG 387
AA+ QVG AF QH+ + RPR+PM+P PP LP P +P M P
Sbjct: 61 TAAFQQQVGAAFQQHLASMQAGQQRPRIPMLP------PPTLPVPGSTQLPNGLSMLPTL 114
Query: 388 VPQMMAPPGAPLPPP------PQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPP--PPPYQ 543
P ++ P L PP + M+RPPG A G NG P PP PP
Sbjct: 115 RPPILTRP--TLIPPGYGVSVGTSPMIRPPGAAVTSPPG---VAQSNGWPRPPTLTPPVS 169
Query: 544 TNPAAAAAAAPPSGG--FNNPNLGGES 618
T A+ A + P +NP + G S
Sbjct: 170 TGVTASTATSSPMSNVLMSNPPISGPS 196
>tr|A2X383|A2X383_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_06664 PE=4 SV=1
Length = 238
Score = 178 bits (451), Expect = 6e-043
Identities = 106/184 (57%), Positives = 118/184 (64%), Gaps = 17/184 (9%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLA------RPRLPMMPMPMGMRPPVLPRPMMPGQGYMPPPGV-PQ 396
AAA+ QVG FNQH+L+ RPRLP++P P GM L P +PG M PGV P
Sbjct: 61 AAAF-QVGAPFNQHLLSFPGGVPRPRLPILPTP-GM---PLGVPQVPGAPLM--PGVRPP 113
Query: 397 MMAPPGAPLPPPPQNGMLRPPGMAPLP--GQGGGPPPNYNGLPLPP-PPPYQTNPAAAAA 567
++ PG P Q + PG +P Q G PP + +PP P Q P
Sbjct: 114 ILPAPGIPGQIQKQQCVKGYPGAPNVPTMPQTGAPPGSMPPGSMPPGSMPMQMAPLPRPP 173
Query: 568 AAPP 579
PP
Sbjct: 174 TLPP 177
>tr|C0HE38|C0HE38_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 169 bits (428), Expect = 3e-040
Identities = 88/125 (70%), Positives = 93/125 (74%), Gaps = 9/125 (7%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVR YYQQFEEQQTQSLIDQRIKEHLGQ
Sbjct: 1 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ 60
Query: 238 AAAYNQVGGAFNQHMLARPRLPMMPMPMGMRPPVLPRPMMPGQGYMPPPGVPQM--MAPP 411
AAA+ Q G FNQH+LA P P R P+LP P MP G+ PG P M + PP
Sbjct: 61 AAAF-QAGAPFNQHLLAFPGAMARP-----RLPILPTPGMP-HGFPQAPGAPLMPGIRPP 113
Query: 412 GAPLP 426
P P
Sbjct: 114 ILPAP 118
>tr|A9T2K5|A9T2K5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_167707 PE=4 SV=1
Length = 309
Score = 159 bits (402), Expect = 3e-037
Identities = 91/189 (48%), Positives = 106/189 (56%), Gaps = 14/189 (7%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MPRYYCDYCDT+LTHDSPSVRKQH AGYKHKANVR YYQQFEEQQTQSLIDQ++KEHLGQ
Sbjct: 1 MPRYYCDYCDTHLTHDSPSVRKQHCAGYKHKANVRQYYQQFEEQQTQSLIDQKVKEHLGQ 60
Query: 238 AA---AYNQVGGAFNQHM---------LARPRLPMMPMPMGMRPPVLPRPMMPGQGYMPP 381
A A QVGGA H+ +A P L P+ +RPPVLP P P GY
Sbjct: 61 TAAALAQQQVGGAVYSHLATLGGGYKPMAAPGLLRPPVLAAVRPPVLPPPSGPSSGY--G 118
Query: 382 PGVPQMMAPPGAPLPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPPPPYQTNPAAA 561
G PP P P N G + G P + N +P ++ A +
Sbjct: 119 SGALPSYRPPVVPPPGGSSNQYYNNNGPSQYSTSNGAPQYSVNNSLVPQSYSSSSSGAQS 178
Query: 562 AAAAPPSGG 588
+ +GG
Sbjct: 179 QYMSSANGG 187
>tr|A8XW44|A8XW44_CAEBR U1 small nuclear ribonucleoprotein C OS=Caenorhabditis
briggsae GN=CBG19656 PE=3 SV=1
Length = 142
Score = 120 bits (299), Expect = 2e-025
Identities = 71/145 (48%), Positives = 87/145 (60%), Gaps = 20/145 (13%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR++YQ++ E Q Q L+DQ +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ-----TAR 55
Query: 238 AAAYNQVGGAFNQHMLARPRL------PMMPMPMGMRPPVLPRPMMPGQGYMPPPGVPQM 399
A A N++ GA + + + PMM P GM P + PRP PG PP G P
Sbjct: 56 AFATNRMHGAVPRTTMGMAPVPPVGHHPMMGGPPGM-PMMAPRP-FPG----PPVGFPG- 108
Query: 400 MAPPGAPLPPPPQNGMLRPPGMAPL 474
AP AP P PP G+ PPGM P+
Sbjct: 109 -APGLAPFPGPPM-GLAGPPGMPPM 131
>tr|P90815|P90815_CAEEL U1 small nuclear ribonucleoprotein C OS=Caenorhabditis
elegans GN=F08B4.7 PE=2 SV=1
Length = 142
Score = 114 bits (284), Expect = 1e-023
Identities = 69/149 (46%), Positives = 85/149 (57%), Gaps = 19/149 (12%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR++YQ++ E Q Q L+DQ +
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNGGRKHKDNVRMFYQKWMEDQAQKLVDQ-----TAR 55
Query: 238 AAAYNQVGGAFNQHMLARPRL------PMMPMPMGMRPPVLPRPMM-PGQGYMPPPGVPQ 396
A A N++ GA + + + PMM P GM P + PRP PG G+ PG P
Sbjct: 56 AFATNRMQGAVPRTTMGMAPVPPVGHHPMMGGPPGM-PMMAPRPFPGPGVGF---PGAPG 111
Query: 397 MMAPPGAPLPPPPQNGMLRPPGMAPLPGQ 483
M PG P+ GM P M P P Q
Sbjct: 112 MPPFPGGPMGMAGPPGM---PPMMPRPPQ 137
>tr|Q5TAL4|Q5TAL4_HUMAN U1 small nuclear ribonucleoprotein C OS=Homo sapiens
GN=SNRPC PE=2 SV=1
Length = 159
Score = 112 bits (280), Expect = 4e-023
Identities = 69/159 (43%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MP++YCDYCDTYLTHDSPSVRK H +G KHK NV+ YYQ++ E+Q QSLID+
Sbjct: 1 MPKFYCDYCDTYLTHDSPSVRKTHCSGRKHKENVKDYYQKWMEEQAQSLIDK-------T 53
Query: 238 AAAYNQVGGAFNQHMLARPRLPMMPMPMGMRPPVLPRP-MMPGQGYMPPPGVPQMMAPPG 414
AA+ Q P M+P P + P PRP MMP PP +P M PP
Sbjct: 54 TAAFQQGKIPPTPFSAPPPAGAMIPPPPSLPGP--PRPGMMPAPHMGGPPMMPMMGPPPP 111
Query: 415 APLPPPPQNGMLRPPGMAPLPGQGGGPPPNYNGLPLPPP 531
+P P GM RPP +P G P P+ P
Sbjct: 112 GMMPVGPAPGM-RPPMGGHMPMMPGPPMMRPPARPMMVP 149
>tr|A7SEP9|A7SEP9_NEMVE Predicted protein OS=Nematostella vectensis GN=v1g244745
PE=4 SV=1
Length = 138
Score = 109 bits (271), Expect = 4e-022
Identities = 63/137 (45%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MP+YYCDYCDT+LTHDSPSVRK HN G KHK NVR YYQ++ E+Q Q+LIDQ Q
Sbjct: 1 MPKYYCDYCDTFLTHDSPSVRKTHNNGRKHKENVRFYYQKWMEEQAQTLIDQTTAAF--Q 58
Query: 238 AAAYNQVGGAFNQHMLARPRLPMMPMPMGMRPPVLP---RPMMPGQGYMPPPGVPQMMAP 408
+ +Q+ ++ P M+P P GM P +P P P PPPG M P
Sbjct: 59 SKPNSQMPPNAPPGLMPPP--GMLPPPGGMPPGRMPPQGLPFPPPGPIPPPPGAGGMRPP 116
Query: 409 PGAPLPPPPQNGMLRPP 459
G P+ M RPP
Sbjct: 117 HGQMHMGGPRPQMGRPP 133
>tr|C4WXR0|C4WXR0_ACYPI ACYPI001217 protein OS=Acyrthosiphon pisum
GN=ACYPI001217 PE=2 SV=1
Length = 146
Score = 107 bits (266), Expect = 2e-021
Identities = 68/153 (44%), Positives = 82/153 (53%), Gaps = 26/153 (16%)
Frame = +1
Query: 58 MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEHLGQ 237
MP+YYCDYCDTYLTHDSPSVRK H G KHK NV+ YYQ++ E+Q Q+LID
Sbjct: 1 MPKYYCDYCDTYLTHDSPSVRKTHCQGRKHKDNVKFYYQKWMEEQAQNLID-------AT 53
Query: 238 AAAYNQVGGAFNQHMLARPRL----PMMPMPMGMRPPVLPRPMMPGQGYMPPPGVPQMMA 405
AAY + P + P M MP G ++P MP G P +P MM
Sbjct: 54 TAAYKAGKIGMKGVCIPPPNMGQSAPQMYMPPG---SIMPPGQMP-MGAPPMMSMPPMMR 109
Query: 406 PP------GAP---LPPPPQNGMLRPPGMAPLP 477
PP GAP +PP P N +RPP M+ P
Sbjct: 110 PPMGQMPMGAPPPMMPPMPPN--MRPPMMSNPP 140
>tr|C1MKH9|C1MKH9_9CHLO U1 small nuclear ribonucleoprotein C protein
OS=Micromonas pusilla CCMP1545 GN=U1snRNPC PE=4 SV=1
Length = 90
Score = 106 bits (264), Expect = 3e-021
Identities = 47/64 (73%), Positives = 52/64 (81%)
Frame = +1
Query: 49 LRTMPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRIYYQQFEEQQTQSLIDQRIKEH 228
L+ +PRYYCDYCD YLTHDSPSVRKQHNAGYKHKANVR YY QFEEQ T S ID+++
Sbjct: 3 LKEVPRYYCDYCDAYLTHDSPSVRKQHNAGYKHKANVRNYYMQFEEQTTLSFIDKKLSSF 62
Query: 229 LGQA 240
G A
Sbjct: 63 DGSA 66
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,279,894,355,858
Number of Sequences: 11397958
Number of Extensions: 4279894355858
Number of Successful Extensions: 1497284259
Number of sequences better than 0.0: 0
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