BLASTX 7.6.2
Query= UN62341 /QuerySize=509
(508 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G06140.1 | Symbols: | zinc finger (C3HC4-type... 245 1e-065
TAIR9_protein||AT5G19080.1 | Symbols: | zinc finger (C3HC4-type... 139 1e-033
TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat fam... 54 6e-008
TAIR9_protein||AT3G53410.1 | Symbols: | zinc finger (C3HC4-type... 53 1e-007
TAIR9_protein||AT3G09770.1 | Symbols: | zinc finger (C3HC4-type... 52 2e-007
TAIR9_protein||AT3G09770.2 | Symbols: | zinc finger (C3HC4-type... 52 2e-007
TAIR9_protein||AT5G19800.1 | Symbols: | hydroxyproline-rich gly... 50 9e-007
TAIR9_protein||AT4G33970.1 | Symbols: | protein binding / struc... 49 2e-006
>TAIR9_protein||AT3G06140.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:1856993-1858777 REVERSE
Length = 360
Score = 245 bits (625), Expect = 1e-065
Identities = 120/165 (72%), Positives = 132/165 (80%), Gaps = 15/165 (9%)
Frame = +1
Query: 19 MGISFSTNRRR--HNNRRHLLLHHHHHPPPPYYYLDPPPPPPPQPFQPHYDYNYSTYHHI 192
MGISFS N RR +NNRRHL HH+ PPPPYYYLDPPPPPP PF PHYDYNYS Y H+
Sbjct: 1 MGISFSNNNRRRDNNNRRHL---HHYPPPPPYYYLDPPPPPP--PFPPHYDYNYSNY-HL 54
Query: 193 SPPLQPPPPRINTCSYGHPYHYYPQHPQYLTTAQPNWWGPTMRPGFVSPQTQMQTQMQPL 372
SPPL PP P+IN+CSYGH YHY+PQ PQY TTAQPNWWGP MRP + P Q QTQ
Sbjct: 55 SPPL-PPQPQINSCSYGH-YHYHPQPPQYFTTAQPNWWGPMMRPAYYCP-PQPQTQ---- 107
Query: 373 PPPPYVENQNAKKVRNDVNVHRDTLRLQVDESVPAHHLLSFVFDA 507
PP PY+E QNAKKVRNDVNVHRDT+RL+VD+ VP HHL+SFVFDA
Sbjct: 108 PPKPYLEQQNAKKVRNDVNVHRDTVRLEVDDLVPGHHLVSFVFDA 152
>TAIR9_protein||AT5G19080.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:6378400-6380287 FORWARD
Length = 379
Score = 139 bits (349), Expect = 1e-033
Identities = 81/177 (45%), Positives = 98/177 (55%), Gaps = 23/177 (12%)
Frame = +1
Query: 19 MGISFSTNRRRHNNRRHLLLHHHHHPPPPYYYLDPPP--PPPPQPFQPHYDYNYSTYHHI 192
MGIS S RR +NN HHH H PPYYY DPPP PPP + ++Y ST
Sbjct: 1 MGISLSKRRRDNNNN-----HHHPHHNPPYYYSDPPPQQPPPQNGYSYSHNYPVSTPQLS 55
Query: 193 SPP--------LQPPPPRINTCSYGHPYH---YYPQH-PQYLTTAQPNWWGPTMRPGFVS 336
PP QPPP +I+ YG YH YYPQ P Y T N + P MRP +
Sbjct: 56 LPPPPAQPPSSSQPPPSQISYRPYGQNYHQNQYYPQQAPPYFTGYHHNGFNPMMRPVYFG 115
Query: 337 PQTQMQTQMQPLPPPPYVENQNAKKVRNDVNVHRDTLRLQVDESVPAHHLLSFVFDA 507
P + PP PYVE+Q AKKV+NDVNV++ T+RL D+ P H+L+SFVFDA
Sbjct: 116 PTPVAVME----PPAPYVEHQTAKKVKNDVNVNKATVRLVADDLNPGHYLVSFVFDA 168
>TAIR9_protein||AT4G13340.1 | Symbols: | leucine-rich repeat family protein /
extensin family protein | chr4:7758610-7760892 FORWARD
Length = 761
Score = 54 bits (127), Expect = 6e-008
Identities = 36/102 (35%), Positives = 41/102 (40%), Gaps = 5/102 (4%)
Frame = +1
Query: 94 PPPPYYYLDPPPPPPPQPFQPHYDYNYSTYHHISPPLQPPPPRINTCSYGHPYHYYPQHP 273
PPPP Y PPPPPPP P P Y + PP+ PPP P + P P
Sbjct: 458 PPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPPPPPVYSPPPP-PPPPPPPPVYSPPPPP 516
Query: 274 QYLTTAQPNWWGPT----MRPGFVSPQTQMQTQMQPLPPPPY 387
Y + P PT RP P + Q P PP PY
Sbjct: 517 VYSSPPPPPSPAPTPVYCTRPPPPPPHSPPPPQFSPPPPEPY 558
Score = 46 bits (108), Expect = 1e-005
Identities = 31/97 (31%), Positives = 38/97 (39%), Gaps = 1/97 (1%)
Frame = +1
Query: 94 PPPPYYYLDPPPPPPPQPFQPHYDYNYSTYHHI-SPPLQPPPPRINTCSYGHPYHYYPQH 270
PPPP Y PPPPPPP + P + SPP PPPP Y P P
Sbjct: 431 PPPPVYSPPPPPPPPPPVYSPPPPPPPPPPPPVYSPPPPPPPPPPPPPVYSPPPPSPPPP 490
Query: 271 PQYLTTAQPNWWGPTMRPGFVSPQTQMQTQMQPLPPP 381
P + + P P P + P + + P P P
Sbjct: 491 PPPVYSPPPPPPPPPPPPVYSPPPPPVYSSPPPPPSP 527
>TAIR9_protein||AT3G53410.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:19801175-19802274 REVERSE
Length = 300
Score = 53 bits (125), Expect = 1e-007
Identities = 24/44 (54%), Positives = 31/44 (70%)
Frame = +1
Query: 376 PPPYVENQNAKKVRNDVNVHRDTLRLQVDESVPAHHLLSFVFDA 507
P YVE+Q A +RND+N+ ++TLRL+ DE P LLSF FDA
Sbjct: 51 PVQYVEHQEAVTIRNDINLKKETLRLEPDEQNPGKFLLSFTFDA 94
>TAIR9_protein||AT3G09770.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2996402-2997835 REVERSE
Length = 389
Score = 52 bits (123), Expect = 2e-007
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 376 PPPYVENQNAKKVRNDVNVHRDTLRLQVDESVPAHHLLSFVFDA 507
P PYVE+Q A +RNDVN+ +++LRL+ D P L+SF FDA
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDA 163
>TAIR9_protein||AT3G09770.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2996629-2997835 REVERSE
Length = 342
Score = 52 bits (123), Expect = 2e-007
Identities = 23/44 (52%), Positives = 31/44 (70%)
Frame = +1
Query: 376 PPPYVENQNAKKVRNDVNVHRDTLRLQVDESVPAHHLLSFVFDA 507
P PYVE+Q A +RNDVN+ +++LRL+ D P L+SF FDA
Sbjct: 120 PTPYVEHQKAVTIRNDVNLKKESLRLEPDPDNPGRFLVSFTFDA 163
>TAIR9_protein||AT5G19800.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr5:6690648-6690938 FORWARD
Length = 97
Score = 50 bits (117), Expect = 9e-007
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 9/59 (15%)
Frame = +1
Query: 55 NNRRHLLLHHHHHPPPPYYY---LDPPPPPPPQPFQPHYDYNYSTYHHISPPLQPPPPR 222
N+ R LL + + PPPP Y + PPPPPPP P Q H + Y SPP PPP +
Sbjct: 24 NDNRKLLTSYKYSPPPPPVYSPPISPPPPPPPPPPQSH----AAAYKRYSPP--PPPSK 76
>TAIR9_protein||AT4G33970.1 | Symbols: | protein binding / structural
constituent of cell wall | chr4:16279795-16281894 REVERSE
Length = 700
Score = 49 bits (114), Expect = 2e-006
Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 2/99 (2%)
Frame = +1
Query: 88 HHPPPPYYYLDPPPPPPPQPFQPHYDYNYSTYHHISPPLQPPPPRINTCSYGHPYHYYPQ 267
H PPPP Y PPPPPP P + PP+ PPP +++ P H P
Sbjct: 548 HSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPPPPVHSPPPPAPVH-SPP 606
Query: 268 HPQYLTTAQPNWWGPTMRPGFVSPQTQMQTQMQPLPPPP 384
P + P + P P F P +Q + PP P
Sbjct: 607 PPVHSPPPPPPVYSPP-PPVFSPPPSQSPPVVYSPPPRP 644
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,199,194,763
Number of Sequences: 33410
Number of Extensions: 28199194763
Number of Successful Extensions: 921798904
Number of sequences better than 0.0: 0
|
