BLASTX 7.6.2
Query= UN62441 /QuerySize=808
(807 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 294 4e-080
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 142 3e-034
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 135 3e-032
TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein | chr1:... 109 3e-024
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 294 bits (752), Expect = 4e-080
Identities = 176/264 (66%), Positives = 195/264 (73%), Gaps = 26/264 (9%)
Frame = +3
Query: 21 MSAIVCGSKRSLFDDLSAASSSPPVSKKLRRFSSSSPPRFS---SSSSLLLLHHLAALFP 191
MSAIVCG KRSLF+DL+AA SPPVSKKLR FSSSS RFS SS LLL HLAA+FP
Sbjct: 1 MSAIVCG-KRSLFEDLAAA--SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFP 57
Query: 192 DMDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEA----------------GRGG 323
DMD QILERAIEECGDDLDSAIR LNQLRLES NK+S+ A +G
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVEPQQQGS 117
Query: 324 SSEKEEVLNLDGTEWVELFVREMTNASDMKDAKDRASRALQALEKSINARAGADAATQSS 503
+ E+ VLNLDGTEWVELFVREM NASDMKDAK RA+RAL+ALEKSINAR G DA
Sbjct: 118 AKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINARTGTDAMQN-- 175
Query: 504 LLQQENSMLRQQLEAIVQENGLLKRAVVTQQKRQRETEDQSQELQRLSRWLVSTRSS*DS 683
LQQEN ML+QQLEAIVQEN LLKRAVVTQQKRQRE+EDQSQELQ L + + + +
Sbjct: 176 -LQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQEQLRT 234
Query: 684 -RGHNYALTLHLNKRSRQ*SISGR 752
+NYALTLHL + + SI GR
Sbjct: 235 LEVNNYALTLHLKQAQQNSSIPGR 258
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 142 bits (357), Expect = 3e-034
Identities = 95/243 (39%), Positives = 144/243 (59%), Gaps = 20/243 (8%)
Frame = +3
Query: 21 MSAIVCGSKRSLFDDLSAASSSPPVSKKLRRFSSSSPPRFSS--SSSLLLLHHLAALFPD 194
MSA+ CG+KRS FDD +SSPP SK+ R FS S+ P +SS SSSL LH + FP
Sbjct: 1 MSAVYCGTKRSYFDD----NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLH---SAFPH 53
Query: 195 MDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEAGRGGSSEKEEVL------NLD 356
++ +L +A+E+ G D ++A++SL S K +EE GG++ +E
Sbjct: 54 IELTVLVKALEDNGSDFNAAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPTS 112
Query: 357 GTEWVELFVREMTNASDMKDAKDRASRALQALEKSINARAGADAATQSSLLQQENSMLRQ 536
G +WVEL VRE+ +S DAK RA+R L+ALEK ++ARA +A + Q+E ++Q
Sbjct: 113 GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNK---FQEEKVAVQQ 169
Query: 537 QLEAIVQENGLLKRAVVTQQKRQRETEDQSQELQRLSRWLVSTRSS-*DSRGHNYALTLH 713
Q+E +V++N +LKRAV Q +RQ+ ED + +L L + + + + +NYAL +
Sbjct: 170 QVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALRMQ 229
Query: 714 LNK 722
L +
Sbjct: 230 LQQ 232
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 135 bits (339), Expect = 3e-032
Identities = 78/100 (78%), Positives = 83/100 (83%), Gaps = 6/100 (6%)
Frame = +3
Query: 21 MSAIVCGSKRSLFDDLSAASSSPPVSKKLRRFSSSSPPRFS---SSSSLLLLHHLAALFP 191
MSAIVCG KRSLF+DL+AA SPPVSKKLR FSSSS RFS SS LLL HLAA+FP
Sbjct: 1 MSAIVCG-KRSLFEDLAAA--SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFP 57
Query: 192 DMDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEA 311
DMD QILERAIEECGDDLDSAIR LNQLRLES NK+S+ A
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSA 97
Score = 98 bits (243), Expect = 5e-021
Identities = 63/151 (41%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Frame = +3
Query: 45 KRSLFDDLSAASSSPPVSKKLRRFSSSSPPRFSSSSSLLLLHHLAALFPDMDNQIL---E 215
K F S++ SPP+ F +L + D+D+ I +
Sbjct: 25 KLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQ 84
Query: 216 RAIEECGDDLDSAIRSLNQLRLESTNKDSEEAGRGGSSEKEEVLNLDGTEWVELFVREMT 395
+E + DSA NQ + + E +G + E+ VLNLDGTEWVELFVREM
Sbjct: 85 LRLESANKNSDSA---TNQSPVVIQEPNVEPQQQGSAKEEPNVLNLDGTEWVELFVREMM 141
Query: 396 NASDMKDAKDRASRALQALEKSINARAGADA 488
NASDMKDAK RA+RAL+ALEKSINAR G DA
Sbjct: 142 NASDMKDAKARAARALEALEKSINARTGTDA 172
>TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein |
chr1:30110059-30111051 REVERSE
Length = 181
Score = 109 bits (271), Expect = 3e-024
Identities = 71/167 (42%), Positives = 101/167 (60%), Gaps = 16/167 (9%)
Frame = +3
Query: 21 MSAIVCGSKRSLFDDLSAASSSPPVSKKLRRFSSSSPPRFSS--SSSLLLLHHLAALFPD 194
MSA+ CG+KRS FDD +SSPP SK+ R FS S+ P +SS SSSL LH + FP
Sbjct: 1 MSAVYCGTKRSYFDD----NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLH---SAFPH 53
Query: 195 MDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEAGRGGSSEKEEVL------NLD 356
++ +L +A+E+ G D ++A++SL S K +EE GG++ +E
Sbjct: 54 IELTVLVKALEDNGSDFNAAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPTS 112
Query: 357 GTEWVELFVREMTNASDMKDAKDRASRALQALEKSINARAGADAATQ 497
G +WVEL VRE+ +S DAK RA+R L+ALEK ++ARA +A +
Sbjct: 113 GDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNK 159
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,199,194,763
Number of Sequences: 33410
Number of Extensions: 28199194763
Number of Successful Extensions: 921798904
Number of sequences better than 0.0: 0
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