BLASTX 7.6.2
Query= UN62955 /QuerySize=729
(728 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79780.1 | Symbols: | FUNCTIONS IN: molecular... 164 6e-041
TAIR9_protein||AT3G16300.1 | Symbols: | integral membrane famil... 88 5e-018
>TAIR9_protein||AT1G79780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane;
EXPRESSED IN: leaf whorl, petal, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant
(InterPro:IPR006702), Uncharacterised protein family UPF0497,
trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis
thaliana protein match is: integral membrane family protein
(TAIR:AT3G16300.1); Has 167 Blast hits to 167 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:30015930-30016856 FORWARD
Length = 188
Score = 164 bits (414), Expect = 6e-041
Identities = 85/117 (72%), Positives = 94/117 (80%), Gaps = 7/117 (5%)
Frame = -3
Query: 678 MNRNGE-----EKRRRR--REGVQVSLRGGCLAASATAMAVMLMAKEEGVAYVYGFPLTL 520
M NGE KRRR+ +E VQV+LRGGCLAASATAMAVML A EEGVA +YGF LTL
Sbjct: 1 MTSNGEGGEVVAKRRRKGIKELVQVALRGGCLAASATAMAVMLTATEEGVADIYGFKLTL 60
Query: 519 NSKWSFSPSYQYVVGACTVTILYSLVHLCLGIYRLFTGSPITPSRSQAWLCFIFDQV 349
+S WSFSPSYQYVVGAC T+LYSL+ LCLG+YRL TGSPITPSR QAWLCF DQ+
Sbjct: 61 SSNWSFSPSYQYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQL 117
Score = 129 bits (322), Expect = 3e-030
Identities = 64/73 (87%), Positives = 66/73 (90%)
Frame = -2
Query: 280 QLFSYLIMSAGSAAIGVTNLNKTGIKHTPLPDFCKTLSSFCNHVALSLLLVLLSFIFLAS 101
QLF YL+MSAGSA GVTNLNKTGI+HTPLPDFCKTLSSFCNHVALSLLLV LSFIFLAS
Sbjct: 116 QLFCYLMMSAGSAGSGVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLAS 175
Query: 100 SSLFNVLVLSTP* 62
SS F VLVLSTP*
Sbjct: 176 SSFFTVLVLSTP* 188
>TAIR9_protein||AT3G16300.1 | Symbols: | integral membrane family protein |
chr3:5525491-5526207 REVERSE
Length = 213
Score = 88 bits (216), Expect = 5e-018
Identities = 39/70 (55%), Positives = 56/70 (80%)
Frame = -2
Query: 280 QLFSYLIMSAGSAAIGVTNLNKTGIKHTPLPDFCKTLSSFCNHVALSLLLVLLSFIFLAS 101
Q+ Y ++S GSAA+GVTN+N+TGI+H PLP+FCK+L FC+H+A S++ L +F+ LA+
Sbjct: 140 QIIGYAMVSGGSAALGVTNMNRTGIRHMPLPNFCKSLGFFCDHLAGSIVFALFAFLLLAA 199
Query: 100 SSLFNVLVLS 71
SSL +VL LS
Sbjct: 200 SSLLDVLHLS 209
Score = 87 bits (213), Expect = 1e-017
Identities = 42/109 (38%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Frame = -3
Query: 666 GEEKRR---RRREGVQVSLRGGCLAASATAMAVMLMAKEEGVAYVYGFPLTLNSKWSFSP 496
GE+ R +R + LR C+A S A+ +M+ A+E + +YGF L++ WS S
Sbjct: 33 GEDNRHGGGKRNDVAMFVLRAMCMAVSTVAVTLMVTARETSMTTLYGFEFQLHAVWSLSD 92
Query: 495 SYQYVVGACTVTILYSLVHLCLGIYRLFTGSPITPSRSQAWLCFIFDQV 349
S Y+V + T+LYSL+ L + RL SP+ P+R+QAW CF+ DQ+
Sbjct: 93 SLIYLVVVSSATVLYSLIQLIISGTRLMRKSPVIPTRTQAWFCFVADQI 141
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,371,375,653
Number of Sequences: 33410
Number of Extensions: 28371375653
Number of Successful Extensions: 926989207
Number of sequences better than 0.0: 0
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