BLASTX 7.6.2
Query= UN63400 /QuerySize=203
(202 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine hydrox... 88 1e-018
TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36... 76 4e-015
TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine hydrox... 60 3e-010
TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine hydrox... 58 9e-010
TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (S... 52 6e-008
TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 47 2e-006
TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 47 2e-006
TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 47 2e-006
>TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine
hydroxymethyltransferase 4); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:8048013-8050021 REVERSE
Length = 472
Score = 88 bits (216), Expect = 1e-018
Identities = 41/44 (93%), Positives = 43/44 (97%)
Frame = +2
Query: 71 MDPVSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
M+PVSSWGNT LV+VDPEIHDLIEKEKRRQCRGIELIASENFTS
Sbjct: 1 MEPVSSWGNTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTS 44
>TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36 (EMBRYO SAC
DEVELOPMENT ARREST 37); catalytic/ glycine hydroxymethyltransferase/
pyridoxal phosphate binding | chr4:8032146-8033718 REVERSE
Length = 471
Score = 76 bits (185), Expect = 4e-015
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +2
Query: 71 MDPVSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
M+PV SWGNT L VDPEI+DLIEKEK RQCRGIELIA+ENFTS
Sbjct: 1 MEPVYSWGNTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTS 44
>TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine
hydroxymethyltransferase 7); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:13696240-13698576 REVERSE
Length = 599
Score = 60 bits (143), Expect = 3e-010
Identities = 26/39 (66%), Positives = 33/39 (84%)
Frame = +2
Query: 80 VSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENF 196
V +WG+ P+ DP+IH+L+EKEK+RQ RGIELIASENF
Sbjct: 130 VRAWGDQPIHLADPDIHELMEKEKQRQVRGIELIASENF 168
>TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine
hydroxymethyltransferase 6); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:7754599-7757087 FORWARD
Length = 600
Score = 58 bits (139), Expect = 9e-010
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 80 VSSWGNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENF 196
V +WGN + DPEIH+ +EKEK+RQ RGIELIASENF
Sbjct: 134 VRAWGNQSIEEADPEIHEFMEKEKQRQFRGIELIASENF 172
>TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE
TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/
poly(U) binding | chr4:17831891-17834742 REVERSE
Length = 518
Score = 52 bits (123), Expect = 6e-008
Identities = 25/36 (69%), Positives = 28/36 (77%)
Frame = +2
Query: 95 NTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
N PL VDPEI D+IE EK RQ +G+ELI SENFTS
Sbjct: 52 NAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTS 87
>TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 518
Score = 47 bits (110), Expect = 2e-006
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 83 SSW---GNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
SSW N L +DPE+ D+IE EK RQ +G ELI SENFTS
Sbjct: 45 SSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTS 87
>TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 47 bits (110), Expect = 2e-006
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 83 SSW---GNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
SSW N L +DPE+ D+IE EK RQ +G ELI SENFTS
Sbjct: 45 SSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTS 87
>TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 47 bits (110), Expect = 2e-006
Identities = 25/43 (58%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Frame = +2
Query: 83 SSW---GNTPLVTVDPEIHDLIEKEKRRQCRGIELIASENFTS 202
SSW N L +DPE+ D+IE EK RQ +G ELI SENFTS
Sbjct: 45 SSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTS 87
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,557,993,264
Number of Sequences: 33410
Number of Extensions: 28557993264
Number of Successful Extensions: 937699958
Number of sequences better than 0.0: 0
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