BLASTX 7.6.2
Query= UN63558 /QuerySize=376
(375 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 89 6e-019
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 87 2e-018
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 81 2e-016
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 89 bits (219), Expect = 6e-019
Identities = 47/74 (63%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
Frame = -1
Query: 339 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGNHQHIGHASTVRRDAPPGQKV 160
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNG + G + + D G +
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLK--GVVTEIIHDPGRGAPL 58
Query: 159 GLIAARRTGRFRGQ 118
+A R RF+ Q
Sbjct: 59 ARVAFRHPFRFKKQ 72
Score = 87 bits (213), Expect = 3e-018
Identities = 41/46 (89%), Positives = 43/46 (93%)
Frame = -1
Query: 225 GNHQHIGHASTVRRDAPPGQKVGLIAARRTGRFRGQAAALASKQE* 88
GNHQHIGHASTVRRDAPPG+KVGLIAARRTGR RGQAAALASK +*
Sbjct: 214 GNHQHIGHASTVRRDAPPGKKVGLIAARRTGRLRGQAAALASKAD* 259
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 87 bits (215), Expect = 2e-018
Identities = 46/74 (62%), Positives = 52/74 (70%), Gaps = 2/74 (2%)
Frame = -1
Query: 339 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGNHQHIGHASTVRRDAPPGQKV 160
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNG + G + + D G +
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLDFGERNGYLK--GVVTEIIHDPGRGAPL 58
Query: 159 GLIAARRTGRFRGQ 118
+ R RF+ Q
Sbjct: 59 ARVTFRHPFRFKKQ 72
Score = 85 bits (209), Expect = 9e-018
Identities = 45/78 (57%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Frame = -1
Query: 306 AGSVFKSHTHHRKGPAKFRS-----LDFGERNGNHQHIGHASTVRRDAPPGQKVGLIAAR 142
AG+ + + R K R ++ GNHQHIGHASTVRRDAPPGQKVGLIAAR
Sbjct: 182 AGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAAR 241
Query: 141 RTGRFRGQAAALASKQE* 88
RTGR RGQAAA A+K +*
Sbjct: 242 RTGRLRGQAAASAAKAD* 259
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 81 bits (198), Expect = 2e-016
Identities = 45/75 (60%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Frame = -1
Query: 339 MGRVIRAQRKG-AGSVFKSHTHHRKGPAKFRSLDFGERNGNHQHIGHASTVRRDAPPGQK 163
MGRVIRAQRKG AGSVFKSHTHHRKGPAKFRSLD+GERNG + G + + D G
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLDYGERNGYLK--GLVTEIIHDPGRGAP 58
Query: 162 VGLIAARRTGRFRGQ 118
+ +A R R+ Q
Sbjct: 59 LARVAFRHPFRYMKQ 73
Score = 69 bits (167), Expect = 7e-013
Identities = 34/45 (75%), Positives = 36/45 (80%)
Frame = -1
Query: 225 GNHQHIGHASTVRRDAPPGQKVGLIAARRTGRFRGQAAALASKQE 91
GNHQHIGHASTVRRD G KVG IAARRTGR RG AA LA+K +
Sbjct: 215 GNHQHIGHASTVRRDKSAGAKVGQIAARRTGRRRGAAATLAAKAD 259
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,557,993,264
Number of Sequences: 33410
Number of Extensions: 28557993264
Number of Successful Extensions: 937699958
Number of sequences better than 0.0: 0
|