BLASTX 7.6.2
Query= UN63716 /QuerySize=583
(582 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S... 208 3e-054
TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S... 201 3e-052
TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S... 200 5e-052
TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S... 195 3e-050
TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S... 194 5e-050
TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S... 146 2e-035
>TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S25, putative |
chr4:16504381-16505339 REVERSE
Length = 109
Score = 208 bits (527), Expect = 3e-054
Identities = 103/109 (94%), Positives = 105/109 (96%)
Frame = -1
Query: 519 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKL 340
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 339 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 193
ITPSILSDRLRINGSLAR+AIR+LMAKGTIRMVS HSSQQIYTRATH *
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATHG* 109
>TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 109
Score = 201 bits (510), Expect = 3e-052
Identities = 99/109 (90%), Positives = 104/109 (95%)
Frame = -1
Query: 519 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKL 340
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 339 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 193
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 109
>TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 109
Score = 200 bits (508), Expect = 5e-052
Identities = 99/109 (90%), Positives = 103/109 (94%)
Frame = -1
Query: 519 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKL 340
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 339 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 193
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 109
>TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 108
Score = 195 bits (493), Expect = 3e-050
Identities = 98/109 (89%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
Frame = -1
Query: 519 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKL 340
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLL EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59
Query: 339 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 193
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 108
Score = 194 bits (491), Expect = 5e-050
Identities = 98/109 (89%), Positives = 102/109 (93%), Gaps = 1/109 (0%)
Frame = -1
Query: 519 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKL 340
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL EAPKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 59
Query: 339 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 193
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S25 (RPS25A) |
chr2:7076713-7077366 REVERSE
Length = 126
Score = 146 bits (366), Expect = 2e-035
Identities = 75/83 (90%), Positives = 78/83 (93%)
Frame = -1
Query: 450 KKKKWSKGKQKEKVNNMVLFDQATYDKLLFEAPKFKLITPSILSDRLRINGSLARKAIRD 271
+ +K SKGKQKEKVNNMVLFDQATYDKL+ EAPKFKLITPSILSDRLRINGSLARKAIRD
Sbjct: 40 ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99
Query: 270 LMAKGTIRMVSTHSSQQIYTRAT 202
LM KGTIRMVSTHSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122
Score = 49 bits (114), Expect = 3e-006
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 515 HRRRTKFHHHPLNPPNLAAGSRRRRSGARESK 420
H+RRTK HHHPLNPPN A SR+R G ++ K
Sbjct: 21 HQRRTKSHHHPLNPPNPVAESRKRSKGKQKEK 52
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,640,559,185
Number of Sequences: 33410
Number of Extensions: 28640559185
Number of Successful Extensions: 942849535
Number of sequences better than 0.0: 0
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