BLASTX 7.6.2
Query= UN63777 /QuerySize=652
(651 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrola... 140 2e-031
gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hyd... 140 2e-031
gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hyd... 136 3e-030
gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hyd... 57 2e-006
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19
[Arabidopsis thaliana]
Length = 672
Score = 140 bits (351), Expect = 2e-031
Identities = 91/139 (65%), Positives = 101/139 (72%), Gaps = 13/139 (9%)
Frame = -2
Query: 650 KKTDTLNTESNSQDDVSVESSGVGTSGTGVSSSLCNGIISHTEDHECKKES--SSSVTVT 477
KKTDTLNTESN D SVESSGVGT+ T V SSLCNGIISH+ED E +KES S+SV V+
Sbjct: 496 KKTDTLNTESN--QDGSVESSGVGTNDTSV-SSLCNGIISHSEDPEYEKESSLSASVPVS 552
Query: 476 ENEKEVVAGRVDTIDSESNPSIDMEHD---HQEEEEANGIEDPTVGNPAVE----DITTS 318
E KEV +VDT+DSESN SIDMEHD +EEEANG EDPTV N AV+ DITT
Sbjct: 553 EEGKEVDV-KVDTVDSESNRSIDMEHDSGTDHQEEEANGKEDPTVENLAVDSSCLDITTP 611
Query: 317 SLSATTESNHREKEDSDTE 261
S SA TE +E E SDTE
Sbjct: 612 SPSAATEFIPQENERSDTE 630
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19
[Arabidopsis thaliana]
Length = 502
Score = 140 bits (351), Expect = 2e-031
Identities = 91/139 (65%), Positives = 101/139 (72%), Gaps = 13/139 (9%)
Frame = -2
Query: 650 KKTDTLNTESNSQDDVSVESSGVGTSGTGVSSSLCNGIISHTEDHECKKES--SSSVTVT 477
KKTDTLNTESN D SVESSGVGT+ T V SSLCNGIISH+ED E +KES S+SV V+
Sbjct: 326 KKTDTLNTESN--QDGSVESSGVGTNDTSV-SSLCNGIISHSEDPEYEKESSLSASVPVS 382
Query: 476 ENEKEVVAGRVDTIDSESNPSIDMEHD---HQEEEEANGIEDPTVGNPAVE----DITTS 318
E KEV +VDT+DSESN SIDMEHD +EEEANG EDPTV N AV+ DITT
Sbjct: 383 EEGKEVDV-KVDTVDSESNRSIDMEHDSGTDHQEEEANGKEDPTVENLAVDSSCLDITTP 441
Query: 317 SLSATTESNHREKEDSDTE 261
S SA TE +E E SDTE
Sbjct: 442 SPSAATEFIPQENERSDTE 460
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 650
Score = 136 bits (341), Expect = 3e-030
Identities = 89/142 (62%), Positives = 98/142 (69%), Gaps = 16/142 (11%)
Frame = -2
Query: 650 KKTDTLNTESNSQDDVSVESSGVGTSGTGVSSSLCNGIISHTEDHECKKES-----SSSV 486
KKTDTLNTESN D SVESSGVG + T V SSLCNGIISH+ED EC KES S+SV
Sbjct: 496 KKTDTLNTESN--QDGSVESSGVGANDTSV-SSLCNGIISHSEDPECGKESSLSSMSASV 552
Query: 485 TVTENEKEVVAGRVDTIDSESNPSIDMEHD---HQEEEEANGIEDPTVGNPAVE----DI 327
V+E KEV A RVDT+DSESNPSIDMEHD +EE ANG EDP N AV+ DI
Sbjct: 553 PVSEEGKEVDA-RVDTVDSESNPSIDMEHDSGTDHQEEAANGKEDPAAENLAVDSSCSDI 611
Query: 326 TTSSLSATTESNHREKEDSDTE 261
TT S SA T +E E SD+E
Sbjct: 612 TTLSPSAATVFIPQENEHSDSE 633
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family
protein [Arabidopsis lyrata subsp. lyrata]
Length = 618
Score = 57 bits (135), Expect = 2e-006
Identities = 47/119 (39%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = -2
Query: 599 VESSGVGTSGTGVSSSLCNGIISHTEDHECKKESSSSVTVTENEKEVVAGRVDTIDSESN 420
VESS VG + S+ + + SSSSV +E EV RVDT+DSESN
Sbjct: 501 VESSMVGAIESRSSTHVTIEDPEREQSPSPSSSSSSSVLTSECCSEV--ERVDTLDSESN 558
Query: 419 PSIDMEHDHQEEEEANGIEDPTVGNPAVE---DITTSSLSATTESNHREKEDSDTEMID 252
PS D +E+ ANG DP V AV+ D TS+ T+S + D DT+MID
Sbjct: 559 PSTDDSATDHQEDAANGNRDPEVKYQAVDSCSDPATSTPLVCTKSKPPVR-DMDTKMID 616
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,428,570,657
Number of Sequences: 15229318
Number of Extensions: 112428570657
Number of Successful Extensions: 28740549
Number of sequences better than 0.0: 0
|