BLASTX 7.6.2
Query= UN63797 /QuerySize=749
(748 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helic... 173 3e-041
gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana] 173 3e-041
gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrat... 173 3e-041
gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA heli... 173 3e-041
gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana] 171 9e-041
gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase... 166 3e-039
gi|225450401|ref|XP_002278318.1| PREDICTED: hypothetical protein... 107 2e-021
gi|118489724|gb|ABK96663.1| unknown [Populus trichocarpa x Popul... 105 8e-021
gi|224124522|ref|XP_002330044.1| predicted protein [Populus tric... 105 8e-021
gi|255543078|ref|XP_002512602.1| dead box ATP-dependent RNA heli... 84 2e-014
gi|17554788|ref|NP_499533.1| SR Protein (splicing factor) family... 69 8e-010
gi|345107441|emb|CCD31036.1| Hypothetical protein C18D11.4b [Cae... 69 8e-010
gi|115782245|ref|XP_789098.2| PREDICTED: hypothetical protein [S... 67 2e-009
gi|254385864|ref|ZP_05001183.1| hypothetical protein SSAG_05310 ... 63 5e-008
gi|290987194|ref|XP_002676308.1| predicted protein [Naegleria gr... 60 4e-007
gi|91784994|ref|YP_560200.1| putative lipoprotein [Burkholderia ... 58 1e-006
gi|328867594|gb|EGG15976.1| RNA-binding region RNP-1 domain-cont... 57 2e-006
gi|46137839|ref|XP_390611.1| hypothetical protein FG10435.1 [Gib... 57 3e-006
gi|225447559|ref|XP_002269146.1| PREDICTED: hypothetical protein... 57 3e-006
gi|17137002|ref|NP_477043.1| CG4038 [Drosophila melanogaster] 55 7e-006
>gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 748
Score = 173 bits (437), Expect = 3e-041
Identities = 90/107 (84%), Positives = 91/107 (85%), Gaps = 5/107 (4%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 647 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSSGGGSSWSR-GGSSSRGSS 703
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRERSFGG+CF CG SGHRA DCPDKRGF
Sbjct: 704 DDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGHRATDCPDKRGF 748
>gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana]
Length = 748
Score = 173 bits (437), Expect = 3e-041
Identities = 90/107 (84%), Positives = 91/107 (85%), Gaps = 5/107 (4%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 647 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSSGGGSSWSR-GGSSSRGSS 703
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRERSFGG+CF CG SGHRA DCPDKRGF
Sbjct: 704 DDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGHRATDCPDKRGF 748
>gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrata subsp.
lyrata]
Length = 748
Score = 173 bits (437), Expect = 3e-041
Identities = 90/107 (84%), Positives = 91/107 (85%), Gaps = 5/107 (4%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 647 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSSGGGSSWSR-GGSSSRGSS 703
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRERSFGG+CF CG SGHRA DCPDKRGF
Sbjct: 704 DDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGHRATDCPDKRGF 748
>gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 655
Score = 173 bits (437), Expect = 3e-041
Identities = 90/107 (84%), Positives = 91/107 (85%), Gaps = 5/107 (4%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 554 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSSGGGSSWSR-GGSSSRGSS 610
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRERSFGG+CF CG SGHRA DCPDKRGF
Sbjct: 611 DDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGHRATDCPDKRGF 655
>gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana]
Length = 748
Score = 171 bits (433), Expect = 9e-041
Identities = 90/107 (84%), Positives = 91/107 (85%), Gaps = 5/107 (4%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 647 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSIGGGSSWSR-GGSSSRGSS 703
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRERSFGG+CF CG SGHRA DCPDKRGF
Sbjct: 704 DDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGHRATDCPDKRGF 748
>gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis
thaliana]
Length = 747
Score = 166 bits (420), Expect = 3e-039
Identities = 89/107 (83%), Positives = 90/107 (84%), Gaps = 6/107 (5%)
Frame = -1
Query: 748 RDRMPRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSS 569
RDRMPRGGGGSRGSR GGR GGSSRGRDS GGDDDR SR S GGGSSWSR GG SRGSS
Sbjct: 647 RDRMPRGGGGSRGSR-GGR-GGSSRGRDSWGGDDDRGSRRSSGGGSSWSR-GGSSSRGSS 703
Query: 568 DDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG S SSSRAPSRE SFGG+CF CG SGHRA DCPDKRGF
Sbjct: 704 DDWLIGGRSS--SSSRAPSRE-SFGGSCFICGKSGHRATDCPDKRGF 747
>gi|225450401|ref|XP_002278318.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 764
Score = 107 bits (267), Expect = 2e-021
Identities = 61/109 (55%), Positives = 69/109 (63%), Gaps = 7/109 (6%)
Frame = -1
Query: 748 RDRMPRGGGGS-RGSRFGGRGGGSSRGRDSRGGDD-DRRSRSSGGGGSSWSRGGGGGSRG 575
RDR RGG RGSR RG GSS G D GGDD +RR S ++WSR R
Sbjct: 661 RDRSSRGGSRERRGSRI-SRGRGSSWGSDDDGGDDLNRRGGRSFRSNNNWSR----NLRT 715
Query: 574 SSDDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
S DDWLIGG RSSS SRERSFGG+CF CG SGHRA++CP+KR +
Sbjct: 716 SEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSGHRASECPNKRDY 764
>gi|118489724|gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 481
Score = 105 bits (261), Expect = 8e-021
Identities = 60/108 (55%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
Frame = -1
Query: 748 RDRMPRGG-GGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGS 572
RDR RGG G RG RG GS GRDS G RR S +SWS+ SR S
Sbjct: 384 RDRPARGGPRGQRGGFRSSRGRGS--GRDSDDGGTYRRGGRSNSNENSWSQ----MSRSS 437
Query: 571 SDDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG R SSR PSR+RSFGG+CFNCG SGHRA++CP+K+ F
Sbjct: 438 GDDWLIGG----RRSSRPPSRDRSFGGSCFNCGRSGHRASECPNKKDF 481
>gi|224124522|ref|XP_002330044.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 105 bits (261), Expect = 8e-021
Identities = 60/108 (55%), Positives = 68/108 (62%), Gaps = 11/108 (10%)
Frame = -1
Query: 748 RDRMPRGG-GGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGS 572
RDR RGG G RG RG GS GRDS G RR S +SWS+ SR S
Sbjct: 678 RDRPARGGPRGQRGGFRSSRGRGS--GRDSDDGGTYRRGGRSNSNENSWSQ----MSRSS 731
Query: 571 SDDWLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
DDWLIGG R SSR PSR+RSFGG+CFNCG SGHRA++CP+K+ F
Sbjct: 732 GDDWLIGG----RRSSRPPSRDRSFGGSCFNCGRSGHRASECPNKKDF 775
>gi|255543078|ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative
[Ricinus communis]
Length = 772
Score = 84 bits (206), Expect = 2e-014
Identities = 55/110 (50%), Positives = 61/110 (55%), Gaps = 11/110 (10%)
Frame = -1
Query: 736 PRGGG-GSRGSRFGGRGGGSSRGRDSRGGDDD--RRSRS-SGGGGSSWSRGGGGGSRGSS 569
PRGGG G RGSR GG GR+S DD R RS S W GGG SR S
Sbjct: 667 PRGGGRGQRGSRSSQGWGGGRGGRNSDDDDDTFRRGGRSFSRSSSDDWLIGGGRSSRPSP 726
Query: 568 DDWLIGGGSDRRSSS---RAPSRERSFGGACFNCGSSGHRAADCPDKRGF 428
G S R SS R+ R+RSFGG+CFNCG SGHRA+DCP+K F
Sbjct: 727 R----GRSSPRDWSSPRDRSSPRDRSFGGSCFNCGRSGHRASDCPNKLDF 772
>gi|17554788|ref|NP_499533.1| SR Protein (splicing factor) family member (rsp-8)
[Caenorhabditis elegans]
Length = 309
Score = 69 bits (166), Expect = 8e-010
Identities = 47/103 (45%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Frame = -1
Query: 733 RGGGGSRGSRFGGRGGGSSRGRDSRGGD---DDRRSRSSGGGGSSWSRGGGGGSRGSSDD 563
RGGG S G RFGG GG R SRGGD DRR GGGG + GGGGG R D
Sbjct: 170 RGGGSSGGGRFGGGGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRY--GGGGGDRYGGDR 227
Query: 562 WLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKR 434
+ GGG RR S RS GG S G PD+R
Sbjct: 228 Y--GGGGGRRGSPDRRGGFRSGGGGGGYMRSGG--GGGGPDRR 266
>gi|345107441|emb|CCD31036.1| Hypothetical protein C18D11.4b [Caenorhabditis
elegans]
Length = 144
Score = 69 bits (166), Expect = 8e-010
Identities = 47/103 (45%), Positives = 50/103 (48%), Gaps = 9/103 (8%)
Frame = -1
Query: 733 RGGGGSRGSRFGGRGGGSSRGRDSRGGD---DDRRSRSSGGGGSSWSRGGGGGSRGSSDD 563
RGGG S G RFGG GG R SRGGD DRR GGGG + GGGGG R D
Sbjct: 5 RGGGSSGGGRFGGGGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRY--GGGGGDRYGGDR 62
Query: 562 WLIGGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAADCPDKR 434
+ GGG RR S RS GG S G PD+R
Sbjct: 63 Y--GGGGGRRGSPDRRGGFRSGGGGGGYMRSGG--GGGGPDRR 101
>gi|115782245|ref|XP_789098.2| PREDICTED: hypothetical protein
[Strongylocentrotus purpuratus]
Length = 373
Score = 67 bits (163), Expect = 2e-009
Identities = 39/79 (49%), Positives = 40/79 (50%)
Frame = -1
Query: 730 GGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSDDWLIG 551
GGGGS GS GG GGS G GG S GGGG S S GGGGG G S W G
Sbjct: 63 GGGGSLGSSGGGSLGGSGGGMGGGGGGGGSSSYGGGGGGGSSSYGGGGGGYGGSSSWGGG 122
Query: 550 GGSDRRSSSRAPSRERSFG 494
GG SSS A S+G
Sbjct: 123 GGGGGWSSSYAWGTSSSWG 141
>gi|254385864|ref|ZP_05001183.1| hypothetical protein SSAG_05310 [Streptomyces
sp. Mg1]
Length = 110
Score = 63 bits (151), Expect = 5e-008
Identities = 39/88 (44%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = -1
Query: 727 GGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSDDWLIGG 548
G G+ G+R G GGG RG ++RGG GGGS G GGGSRG S GG
Sbjct: 5 GNGNGGNRNSGGGGGGGRG-NARGGSSSGGGGGYRGGGSGGGSGSGGGSRGGSSGGYQGG 63
Query: 547 GSDRRSSSRAPSRERSFGGACFNCGSSG 464
GS SS R S GG+ GSSG
Sbjct: 64 GSRGGSSLRGGSSGGYQGGSSSRGGSSG 91
>gi|290987194|ref|XP_002676308.1| predicted protein [Naegleria gruberi]
Length = 421
Score = 60 bits (143), Expect = 4e-007
Identities = 37/94 (39%), Positives = 41/94 (43%), Gaps = 4/94 (4%)
Frame = -1
Query: 733 RGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSDDWLI 554
RGGG G R GGRGGG GR RGG R S G GG RGG G RG S
Sbjct: 79 RGGGRGGGGRGGGRGGGRGGGRGGRGG----RGGSGGRGGGRGGRGGSAGGRGGSGRGSS 134
Query: 553 GGGSDRRSSSRAPSRERSFGGACFNCGSSGHRAA 452
GG +S + GG+ G G + A
Sbjct: 135 GGRGGNGASGKGGRGGGGRGGSSGGRGGRGGKGA 168
>gi|91784994|ref|YP_560200.1| putative lipoprotein [Burkholderia xenovorans
LB400]
Length = 351
Score = 58 bits (139), Expect = 1e-006
Identities = 37/93 (39%)
Frame = -1
Query: 730 GGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSDDWLIG 551
GG GS GG GG S G S GG S GG S GGG GSS G
Sbjct: 197 GGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSGGGSSG 256
Query: 550 GGSDRRSSSRAPSRERSFGGACFNCGSSGHRAA 452
GGS SS S G C GSSG A
Sbjct: 257 GGSSGGGSSGGGSSGGGSSGGCGCGGSSGGAGA 289
>gi|328867594|gb|EGG15976.1| RNA-binding region RNP-1 domain-containing protein
[Dictyostelium fasciculatum]
Length = 372
Score = 57 bits (136), Expect = 2e-006
Identities = 41/93 (44%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Frame = -1
Query: 730 GGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSR--SSGGG--GSSWSRGGGGGSRGSSDD 563
GG G G GG GGGS G GG DR SR SSGGG S S GGGG R S D
Sbjct: 134 GGSGGYGGGSGGYGGGSGYGGGGGGGGYDRHSRYPSSGGGRYSSGGSSSGGGGYRDSRD- 192
Query: 562 WLIGGGSDRRSSSRAPSRERSFGGACFNCGSSG 464
GGG SS R+ G + + GS G
Sbjct: 193 ---GGGYRGGSSGGYGDRDYRGGSSSYRGGSRG 222
>gi|46137839|ref|XP_390611.1| hypothetical protein FG10435.1 [Gibberella zeae
PH-1]
Length = 1763
Score = 57 bits (135), Expect = 3e-006
Identities = 37/88 (42%), Positives = 56/88 (63%)
Frame = +2
Query: 470 TSTVEASTSKTPLPRRSSAA*SSVTTAANQPIIRTSSGTTTTTTGPAATSTTTASASSVI 649
TS+ +S+S T L +S + S+ +T+++ TSS T+TT+T ++T+T++ + SS
Sbjct: 1164 TSSSTSSSSSTSLSTSTSTSTSTSSTSSSISTSSTSSSTSTTSTSTSSTTTSSTTTSSST 1223
Query: 650 ITSPTITSS**SSSSTAKS*PSRTSSSS 733
TS T TSS SSSST+ S TSSSS
Sbjct: 1224 KTSSTTTSSTSSSSSTSTSTSLSTSSSS 1251
>gi|225447559|ref|XP_002269146.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 462
Score = 57 bits (135), Expect = 3e-006
Identities = 32/87 (36%), Positives = 39/87 (44%)
Frame = -1
Query: 730 GGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSDDWLIG 551
GGGG G +GG GGG G +S GG R GGGG GGGGG +G G
Sbjct: 23 GGGGYGGGGYGGGGGGGGYGGNSGGGGGGRGGGYGGGGGRGGGGGGGGGYQGGDRGGRGG 82
Query: 550 GGSDRRSSSRAPSRERSFGGACFNCGS 470
GG R R+ + +CG+
Sbjct: 83 GGGGRGGGRGGSGRDGDWLCPNPSCGN 109
>gi|17137002|ref|NP_477043.1| CG4038 [Drosophila melanogaster]
Length = 237
Score = 55 bits (132), Expect = 7e-006
Identities = 28/57 (49%), Positives = 29/57 (50%)
Frame = -1
Query: 736 PRGGGGSRGSRFGGRGGGSSRGRDSRGGDDDRRSRSSGGGGSSWSRGGGGGSRGSSD 566
PRGGGG G FGG GGG RG GG GGGG GG GG RG+ D
Sbjct: 6 PRGGGGGGGRGFGGGGGGGGRGFGGGGGGRGGGGGRGGGGGFGRGGGGRGGGRGAFD 62
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,428,570,657
Number of Sequences: 15229318
Number of Extensions: 112428570657
Number of Successful Extensions: 28740549
Number of sequences better than 0.0: 0
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