BLASTX 7.6.2
Query= UN63960 /QuerySize=584
(583 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297832026|ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subs... 295 2e-078
gi|15226523|ref|NP_179145.1| DNA-directed RNA polymerase II subu... 294 9e-078
gi|21593370|gb|AAM65319.1| DNA-directed RNA polymerase II, third... 290 7e-077
gi|255555327|ref|XP_002518700.1| DNA-directed RNA polymerase II ... 284 7e-075
gi|297832024|ref|XP_002883894.1| RBP36A [Arabidopsis lyrata subs... 281 5e-074
gi|147838054|emb|CAN60923.1| hypothetical protein VITISV_019338 ... 275 4e-072
gi|225428887|ref|XP_002285322.1| PREDICTED: hypothetical protein... 273 9e-072
gi|15226509|ref|NP_179142.1| DNA-directed RNA polymerase II subu... 260 1e-067
gi|514320|gb|AAB03740.1| RNA polymerase II third largest subunit... 260 1e-067
gi|145328718|ref|NP_001077894.1| DNA-directed RNA polymerase II ... 260 1e-067
gi|224105591|ref|XP_002313865.1| predicted protein [Populus tric... 259 2e-067
gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation [Medicag... 257 1e-066
gi|71535027|gb|AAZ32911.1| DNA-directed RNA polymerase II third ... 252 2e-065
gi|168026615|ref|XP_001765827.1| predicted protein [Physcomitrel... 228 3e-058
gi|294464103|gb|ADE77570.1| unknown [Picea sitchensis] 227 8e-058
gi|302803341|ref|XP_002983424.1| hypothetical protein SELMODRAFT... 225 3e-057
gi|302754380|ref|XP_002960614.1| hypothetical protein SELMODRAFT... 225 3e-057
gi|115477954|ref|NP_001062572.1| Os09g0110400 [Oryza sativa Japo... 218 6e-055
gi|242048618|ref|XP_002462055.1| hypothetical protein SORBIDRAFT... 217 8e-055
gi|226529628|ref|NP_001149261.1| LOC100282883 [Zea mays] 216 2e-054
>gi|297832026|ref|XP_002883895.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
Length = 319
Score = 295 bits (755), Expect = 2e-078
Identities = 149/162 (91%), Positives = 155/162 (95%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GATYQRFPK+ IRELKDDYAKFELR+TDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GATYQRFPKITIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF IDSS +DSS+Q+GIIIVKLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTIDSSASDSSEQKGIIIVKLRRGQELK 164
>gi|15226523|ref|NP_179145.1| DNA-directed RNA polymerase II subunit RPB3-A
[Arabidopsis thaliana]
Length = 319
Score = 294 bits (750), Expect = 9e-078
Identities = 148/162 (91%), Positives = 155/162 (95%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GATYQRFPK+KIRELKDDYAKFELR+TDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ EFCSVEF L +KC+TDQTLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF IDSS +DSS+ +GIIIVKLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELK 164
>gi|21593370|gb|AAM65319.1| DNA-directed RNA polymerase II, third largest
subunit [Arabidopsis thaliana]
Length = 319
Score = 290 bits (742), Expect = 7e-077
Identities = 147/162 (90%), Positives = 154/162 (95%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GATYQRFPK+KIRELKDDYAKFELR+TDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLI LTSERAMSMRFSRDCDACDGDGQ EFCSVEF L +KC+TDQTLDVTS
Sbjct: 63 NDEFIAHRLGLISLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF IDSS +DSS+ +GIIIVKLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELK 164
>gi|255555327|ref|XP_002518700.1| DNA-directed RNA polymerase II subunit,
putative [Ricinus communis]
Length = 318
Score = 284 bits (725), Expect = 7e-075
Identities = 143/162 (88%), Positives = 153/162 (94%), Gaps = 1/162 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+YQRFP++KIRELKDDY KFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 3 GASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ ++CSVEFHLRAKCITDQTLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+DLYS+D TV VDF DSSG DSS+QRGIIIVKLRRGQEL+
Sbjct: 123 KDLYSSDHTVVPVDFS-DSSGYDSSEQRGIIIVKLRRGQELR 163
>gi|297832024|ref|XP_002883894.1| RBP36A [Arabidopsis lyrata subsp. lyrata]
Length = 319
Score = 281 bits (718), Expect = 5e-074
Identities = 141/162 (87%), Positives = 150/162 (92%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFPK+ IRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AIDLV IEVNSSVL
Sbjct: 3 GTTYQRFPKINIRELKDDYAKFELRETDVSMANALRRVMISEVPTIAIDLVNIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RLGLIPLTSERAMSMRF +DCDACDG+GQ EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLGLIPLTSERAMSMRFCQDCDACDGEGQCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF IDSS +DSS+Q+GI IVKLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTIDSSASDSSEQKGITIVKLRRGQELK 164
>gi|147838054|emb|CAN60923.1| hypothetical protein VITISV_019338 [Vitis
vinifera]
Length = 318
Score = 275 bits (701), Expect = 4e-072
Identities = 138/162 (85%), Positives = 151/162 (93%), Gaps = 1/162 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFPK+KIRE+KDDYAKFELR+TD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 3 GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ EFCSVEFHLRAKC+TD+TLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+DL S+D TV VDF DSSG DS+ ++GIIIVKLRRGQEL+
Sbjct: 123 KDLISSDHTVVPVDFS-DSSGYDSADKKGIIIVKLRRGQELR 163
>gi|225428887|ref|XP_002285322.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 318
Score = 273 bits (698), Expect = 9e-072
Identities = 137/162 (84%), Positives = 151/162 (93%), Gaps = 1/162 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFPK+KIRE+KDDYAKFELR+TD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 3 GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQ EFCSVEFHLRAKC+TD+TLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+DL S+D TV VDF DSSG DS+ ++GIIIVKLRRGQEL+
Sbjct: 123 KDLISSDHTVVPVDFS-DSSGYDSADKKGIIIVKLRRGQELR 163
>gi|15226509|ref|NP_179142.1| DNA-directed RNA polymerase II subunit RPB3-B
[Arabidopsis thaliana]
Length = 319
Score = 260 bits (663), Expect = 1e-067
Identities = 133/162 (82%), Positives = 144/162 (88%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFP VKIRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AI LV+IEVNSSVL
Sbjct: 3 GVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RL LIPLTSERAMSMRF +DC+ C+GD EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF +SS +DSS+ +GIII KLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELK 164
>gi|514320|gb|AAB03740.1| RNA polymerase II third largest subunit [Arabidopsis
thaliana]
Length = 319
Score = 260 bits (663), Expect = 1e-067
Identities = 133/162 (82%), Positives = 144/162 (88%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFP VKIRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AI LV+IEVNSSVL
Sbjct: 3 GVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RL LIPLTSERAMSMRF +DC+ C+GD EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF +SS +DSS+ +GIII KLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELK 164
>gi|145328718|ref|NP_001077894.1| DNA-directed RNA polymerase II subunit RPB3-B
[Arabidopsis thaliana]
Length = 235
Score = 260 bits (663), Expect = 1e-067
Identities = 133/162 (82%), Positives = 144/162 (88%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFP VKIRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AI LV+IEVNSSVL
Sbjct: 3 GVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RL LIPLTSERAMSMRF +DC+ C+GD EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF +SS +DSS+ +GIII KLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELK 164
>gi|224105591|ref|XP_002313865.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 259 bits (660), Expect = 2e-067
Identities = 131/161 (81%), Positives = 141/161 (87%), Gaps = 4/161 (2%)
Frame = +1
Query: 103 TYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 282
+YQRFPK+KIRE+KDDY KFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLND
Sbjct: 5 SYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64
Query: 283 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRD 462
EFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQ E+CSVEFHLRAKCITDQTLDVTS+D
Sbjct: 65 EFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKD 124
Query: 463 LYSADPTVTTVDFGIDSSGAD----SSKQRGIIIVKLRRGQ 573
LYS+D V VDF S D + QRGIIIVKLRRGQ
Sbjct: 125 LYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQ 165
>gi|85719360|gb|ABC75365.1| RNA polymerase, dimerisation [Medicago truncatula]
Length = 318
Score = 257 bits (654), Expect = 1e-066
Identities = 135/163 (82%), Positives = 145/163 (88%), Gaps = 3/163 (1%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+Y R P+VKIRELKDDY KFELRDTD S+ANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQ E+CSVEFHLR KCITDQTLDV+S
Sbjct: 63 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVSS 122
Query: 457 RDLYSADPTVTTVDF-GIDSSGADSSKQRGIIIVKLRRGQELK 582
+DL S+D TVT VD G D+S S RGIIIVKLRRGQEL+
Sbjct: 123 KDLISSDHTVTPVDVPGGDAS--IESDGRGIIIVKLRRGQELR 163
>gi|71535027|gb|AAZ32911.1| DNA-directed RNA polymerase II third largest subunit
[Medicago sativa]
Length = 184
Score = 252 bits (643), Expect = 2e-065
Identities = 131/162 (80%), Positives = 142/162 (87%), Gaps = 7/162 (4%)
Frame = +1
Query: 106 YQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 285
Y R P+VKIRELKDDY KFELRDTD S+ANALRRVMISEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 1 YARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVLNDE 60
Query: 286 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDL 465
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQ E+CSVEFHLR KCITDQTLDV+S+DL
Sbjct: 61 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVSSKDL 120
Query: 466 YSADPTVTTVDFGIDSSGADSSKQ---RGIIIVKLRRGQELK 582
S+D TVT VD G D+S + RGIIIVKLRRGQEL+
Sbjct: 121 ISSDHTVTPVDV----PGGDASVESDGRGIIIVKLRRGQELR 158
>gi|168026615|ref|XP_001765827.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 324
Score = 228 bits (581), Expect = 3e-058
Identities = 112/161 (69%), Positives = 133/161 (82%), Gaps = 3/161 (1%)
Frame = +1
Query: 103 TYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 282
+YQRFP V+IR++KDD KFELRDTD S+ANALRR+MI+EVPT+AIDLVEIE NSSVLND
Sbjct: 5 SYQRFPTVRIRDIKDDVLKFELRDTDASIANALRRIMIAEVPTLAIDLVEIESNSSVLND 64
Query: 283 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRD 462
EF+AHRLGLIP+ S+RAM MR SRDCDACDGDG+ E+CS+EFHL KC DQTLDVTS D
Sbjct: 65 EFLAHRLGLIPIVSDRAMEMRLSRDCDACDGDGRCEYCSIEFHLSVKCTGDQTLDVTSLD 124
Query: 463 LYSADPTVTTVDF---GIDSSGADSSKQRGIIIVKLRRGQE 576
L S+DP++ VD D G +S+ RGI+IVKLR+GQE
Sbjct: 125 LVSSDPSIIPVDAAGRAADMGGFESNDTRGILIVKLRKGQE 165
>gi|294464103|gb|ADE77570.1| unknown [Picea sitchensis]
Length = 330
Score = 227 bits (578), Expect = 8e-058
Identities = 118/162 (72%), Positives = 131/162 (80%), Gaps = 3/162 (1%)
Frame = +1
Query: 100 ATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLN 279
++YQRFP VKIRE+KDDY KFEL++TD S+ANALRRVMI EVPT+AIDLVEIE NSSVLN
Sbjct: 9 SSYQRFPTVKIREMKDDYMKFELKNTDPSIANALRRVMIGEVPTIAIDLVEIESNSSVLN 68
Query: 280 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSR 459
DEF+AHRLGLIPL SERAM MRFSRDCD CDGD Q +CSVEF L KC DQTLDVTS
Sbjct: 69 DEFLAHRLGLIPLISERAMDMRFSRDCDTCDGDAQCHYCSVEFKLNVKCDGDQTLDVTSL 128
Query: 460 DLYSAD---PTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQE 576
DL S+D V VD D + D+S+QRGIIIVKLRRGQE
Sbjct: 129 DLVSSDMRENPVVAVDRAADMNVFDASEQRGIIIVKLRRGQE 170
>gi|302803341|ref|XP_002983424.1| hypothetical protein SELMODRAFT_180179
[Selaginella moellendorffii]
Length = 320
Score = 225 bits (573), Expect = 3e-057
Identities = 111/162 (68%), Positives = 137/162 (84%), Gaps = 1/162 (0%)
Frame = +1
Query: 100 ATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLN 279
A+YQRFP V+IR+LKDD+ KFELRDTD S+ANALRRV+I+EVPT+AIDLVEIE NSSVLN
Sbjct: 3 ASYQRFPTVRIRDLKDDFLKFELRDTDASIANALRRVIIAEVPTLAIDLVEIEANSSVLN 62
Query: 280 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSR 459
DEFIAHRLGLIPLTS++AM MR+SRDCD CDGDG+ ++CS+EF L KC +++TLDVTS
Sbjct: 63 DEFIAHRLGLIPLTSDKAMEMRYSRDCDECDGDGRCDYCSIEFTLSVKCTSEETLDVTSH 122
Query: 460 DLYSADPTVTTVD-FGIDSSGADSSKQRGIIIVKLRRGQELK 582
DL S+D V VD G D + ++++GI+IVKLR+GQELK
Sbjct: 123 DLQSSDSQVVPVDSIGHDPDIENFNQKKGILIVKLRKGQELK 164
>gi|302754380|ref|XP_002960614.1| hypothetical protein SELMODRAFT_75337
[Selaginella moellendorffii]
Length = 320
Score = 225 bits (573), Expect = 3e-057
Identities = 111/162 (68%), Positives = 137/162 (84%), Gaps = 1/162 (0%)
Frame = +1
Query: 100 ATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLN 279
A+YQRFP V+IR+LKDD+ KFELRDTD S+ANALRRV+I+EVPT+AIDLVEIE NSSVLN
Sbjct: 3 ASYQRFPTVRIRDLKDDFLKFELRDTDASIANALRRVIIAEVPTLAIDLVEIEANSSVLN 62
Query: 280 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSR 459
DEFIAHRLGLIPLTS++AM MR+SRDCD CDGDG+ ++CS+EF L KC +++TLDVTS
Sbjct: 63 DEFIAHRLGLIPLTSDKAMEMRYSRDCDECDGDGRCDYCSIEFTLSVKCTSEETLDVTSH 122
Query: 460 DLYSADPTVTTVD-FGIDSSGADSSKQRGIIIVKLRRGQELK 582
DL S+D V VD G D + ++++GI+IVKLR+GQELK
Sbjct: 123 DLQSSDSQVVPVDSIGHDPDIENFNQKKGILIVKLRKGQELK 164
>gi|115477954|ref|NP_001062572.1| Os09g0110400 [Oryza sativa Japonica Group]
Length = 330
Score = 218 bits (553), Expect = 6e-055
Identities = 110/135 (81%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFP+V+IRELKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 7 GVSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 66
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDVT 453
NDEFIAHRLGLIPLTS AM+MRFSRDCDACDGDG E+CSVEFHL A+ +DQTL+VT
Sbjct: 67 NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 126
Query: 454 SRDLYSADPTVTTVD 498
S DL S DP V VD
Sbjct: 127 SNDLRSTDPKVCPVD 141
>gi|242048618|ref|XP_002462055.1| hypothetical protein SORBIDRAFT_02g014460
[Sorghum bicolor]
Length = 328
Score = 217 bits (552), Expect = 8e-055
Identities = 110/135 (81%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+YQRFP+V+IR+LKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 6 GASYQRFPRVRIRDLKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 65
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDVT 453
NDEFIAHRLGLIPLTS AM MRFSRDCDACDGDG E+CSVEFHL A+ +DQTL+VT
Sbjct: 66 NDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 125
Query: 454 SRDLYSADPTVTTVD 498
S DL S DP V VD
Sbjct: 126 SNDLRSMDPKVCPVD 140
>gi|226529628|ref|NP_001149261.1| LOC100282883 [Zea mays]
Length = 328
Score = 216 bits (548), Expect = 2e-054
Identities = 110/136 (80%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Frame = +1
Query: 94 SGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSV 273
SG +YQRFP+V+IRELKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSV
Sbjct: 5 SGTSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSV 64
Query: 274 LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDV 450
LNDEFIAHRLGLIPLTS AM MRFSRDCDACDGDG E+CSVEFHL +DQTL+V
Sbjct: 65 LNDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLSVHATDSDQTLEV 124
Query: 451 TSRDLYSADPTVTTVD 498
TS DL S DP V VD
Sbjct: 125 TSNDLRSMDPKVCPVD 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,428,570,657
Number of Sequences: 15229318
Number of Extensions: 112428570657
Number of Successful Extensions: 28740549
Number of sequences better than 0.0: 0
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