BLASTX 7.6.2
Query= UN63960 /QuerySize=584
(583 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|Q8LAJ1|Q8LAJ1_ARATH DNA-directed RNA polymerase II, third lar... 290 5e-077
tr|B9RYB6|B9RYB6_RICCO DNA-directed RNA polymerase II subunit, p... 284 5e-075
tr|A5B429|A5B429_VITVI Putative uncharacterized protein OS=Vitis... 275 3e-072
tr|A8MR04|A8MR04_ARATH Uncharacterized protein At2g15400.2 OS=Ar... 260 8e-068
tr|Q0WRA4|Q0WRA4_ARATH DNA-directed RNA polymerase II, third lar... 260 8e-068
tr|B9HS44|B9HS44_POPTR Predicted protein OS=Populus trichocarpa ... 259 2e-067
tr|Q2MGQ5|Q2MGQ5_MEDTR RNA polymerase, dimerisation OS=Medicago ... 257 9e-067
tr|Q45NH1|Q45NH1_MEDSA DNA-directed RNA polymerase II third larg... 252 2e-065
tr|A9SHD1|A9SHD1_PHYPA Predicted protein OS=Physcomitrella paten... 228 2e-058
tr|D5ADF1|D5ADF1_PICSI Putative uncharacterized protein OS=Picea... 227 6e-058
tr|B8BCX6|B8BCX6_ORYSI Putative uncharacterized protein OS=Oryza... 218 4e-055
tr|Q6YX88|Q6YX88_ORYSJ Os09g0110400 protein OS=Oryza sativa subs... 218 4e-055
tr|C5X7D7|C5X7D7_SORBI Putative uncharacterized protein Sb02g014... 217 6e-055
tr|B6TCC3|B6TCC3_MAIZE DNA-directed RNA polymerase II 36 kDa pol... 216 2e-054
tr|A9SM40|A9SM40_PHYPA Predicted protein OS=Physcomitrella paten... 161 4e-038
tr|D2W3Y1|D2W3Y1_NAEGR Predicted protein OS=Naegleria gruberi GN... 141 5e-032
tr|Q9P5U3|Q9P5U3_NEUCR DNA-directed RNA polymerase II 33 kDa pol... 139 2e-031
tr|D0NY82|D0NY82_PHYIN DNA-directed RNA polymerase II 36 kDa pol... 139 2e-031
tr|Q2GNN7|Q2GNN7_CHAGB Putative uncharacterized protein OS=Chaet... 138 4e-031
tr|D1ZQ03|D1ZQ03_SORMA Whole genome shotgun sequence assembly, s... 137 1e-030
>tr|Q8LAJ1|Q8LAJ1_ARATH DNA-directed RNA polymerase II, third largest subunit
OS=Arabidopsis thaliana PE=2 SV=1
Length = 319
Score = 290 bits (742), Expect = 5e-077
Identities = 147/162 (90%), Positives = 154/162 (95%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GATYQRFPK+KIRELKDDYAKFELR+TDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GATYQRFPKIKIRELKDDYAKFELRETDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLI LTSERAMSMRFSRDCDACDGDGQ EFCSVEF L +KC+TDQTLDVTS
Sbjct: 63 NDEFIAHRLGLISLTSERAMSMRFSRDCDACDGDGQCEFCSVEFRLSSKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF IDSS +DSS+ +GIIIVKLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTIDSSVSDSSEHKGIIIVKLRRGQELK 164
>tr|B9RYB6|B9RYB6_RICCO DNA-directed RNA polymerase II subunit, putative
OS=Ricinus communis GN=RCOM_0811900 PE=4 SV=1
Length = 318
Score = 284 bits (725), Expect = 5e-075
Identities = 143/162 (88%), Positives = 153/162 (94%), Gaps = 1/162 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+YQRFP++KIRELKDDY KFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 3 GASYQRFPRIKIRELKDDYCKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ ++CSVEFHLRAKCITDQTLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCDYCSVEFHLRAKCITDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+DLYS+D TV VDF DSSG DSS+QRGIIIVKLRRGQEL+
Sbjct: 123 KDLYSSDHTVVPVDFS-DSSGYDSSEQRGIIIVKLRRGQELR 163
>tr|A5B429|A5B429_VITVI Putative uncharacterized protein OS=Vitis vinifera
GN=VITISV_019338 PE=4 SV=1
Length = 318
Score = 275 bits (701), Expect = 3e-072
Identities = 138/162 (85%), Positives = 151/162 (93%), Gaps = 1/162 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFPK+KIRE+KDDYAKFELR+TD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 3 GVSYQRFPKIKIREVKDDYAKFELRETDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQ EFCSVEFHLRAKC+TD+TLDVTS
Sbjct: 63 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEFCSVEFHLRAKCMTDETLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+DL S+D TV VDF DSSG DS+ ++GIIIVKLRRGQEL+
Sbjct: 123 KDLISSDHTVVPVDFS-DSSGYDSADKKGIIIVKLRRGQELR 163
>tr|A8MR04|A8MR04_ARATH Uncharacterized protein At2g15400.2 OS=Arabidopsis
thaliana GN=At2g15400 PE=4 SV=1
Length = 235
Score = 260 bits (663), Expect = 8e-068
Identities = 133/162 (82%), Positives = 144/162 (88%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFP VKIRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AI LV+IEVNSSVL
Sbjct: 3 GVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RL LIPLTSERAMSMRF +DC+ C+GD EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF +SS +DSS+ +GIII KLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELK 164
>tr|Q0WRA4|Q0WRA4_ARATH DNA-directed RNA polymerase II, third largest subunit
OS=Arabidopsis thaliana GN=At2g15400 PE=2 SV=1
Length = 319
Score = 260 bits (663), Expect = 8e-068
Identities = 133/162 (82%), Positives = 144/162 (88%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G TYQRFP VKIRELKDDYAKFELR+TDVSMANALRRVMISEVPT+AI LV+IEVNSSVL
Sbjct: 3 GVTYQRFPTVKIRELKDDYAKFELRETDVSMANALRRVMISEVPTMAIHLVKIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIA RL LIPLTSERAMSMRF +DC+ C+GD EFCSVEF L AKC+TDQTLDVTS
Sbjct: 63 NDEFIAQRLSLIPLTSERAMSMRFCQDCEDCNGDEHCEFCSVEFPLSAKCVTDQTLDVTS 122
Query: 457 RDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
RDLYSADPTVT VDF +SS +DSS+ +GIII KLRRGQELK
Sbjct: 123 RDLYSADPTVTPVDFTSNSSTSDSSEHKGIIIAKLRRGQELK 164
>tr|B9HS44|B9HS44_POPTR Predicted protein OS=Populus trichocarpa
GN=POPTRDRAFT_1087179 PE=4 SV=1
Length = 346
Score = 259 bits (660), Expect = 2e-067
Identities = 131/161 (81%), Positives = 141/161 (87%), Gaps = 4/161 (2%)
Frame = +1
Query: 103 TYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 282
+YQRFPK+KIRE+KDDY KFELR+TD SMANALRRVMI+EVPT+AIDLVEIEVNSSVLND
Sbjct: 5 SYQRFPKIKIREMKDDYLKFELRETDASMANALRRVMIAEVPTIAIDLVEIEVNSSVLND 64
Query: 283 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRD 462
EFIAHRLGLIPLTSERAM MRFSRDCDACDGDGQ E+CSVEFHLRAKCITDQTLDVTS+D
Sbjct: 65 EFIAHRLGLIPLTSERAMGMRFSRDCDACDGDGQCEYCSVEFHLRAKCITDQTLDVTSKD 124
Query: 463 LYSADPTVTTVDFGIDSSGAD----SSKQRGIIIVKLRRGQ 573
LYS+D V VDF S D + QRGIIIVKLRRGQ
Sbjct: 125 LYSSDHAVIPVDFSDPSDANDPFDHTETQRGIIIVKLRRGQ 165
>tr|Q2MGQ5|Q2MGQ5_MEDTR RNA polymerase, dimerisation OS=Medicago truncatula
GN=MtrDRAFT_AC147481g15v2 PE=4 SV=1
Length = 318
Score = 257 bits (654), Expect = 9e-067
Identities = 135/163 (82%), Positives = 145/163 (88%), Gaps = 3/163 (1%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+Y R P+VKIRELKDDY KFELRDTD S+ANALRRVMISEVPTVAIDLVEIEVNSSVL
Sbjct: 3 GASYARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTVAIDLVEIEVNSSVL 62
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTS 456
NDEFIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQ E+CSVEFHLR KCITDQTLDV+S
Sbjct: 63 NDEFIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVSS 122
Query: 457 RDLYSADPTVTTVDF-GIDSSGADSSKQRGIIIVKLRRGQELK 582
+DL S+D TVT VD G D+S S RGIIIVKLRRGQEL+
Sbjct: 123 KDLISSDHTVTPVDVPGGDAS--IESDGRGIIIVKLRRGQELR 163
>tr|Q45NH1|Q45NH1_MEDSA DNA-directed RNA polymerase II third largest subunit
(Fragment) OS=Medicago sativa PE=2 SV=1
Length = 184
Score = 252 bits (643), Expect = 2e-065
Identities = 131/162 (80%), Positives = 142/162 (87%), Gaps = 7/162 (4%)
Frame = +1
Query: 106 YQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 285
Y R P+VKIRELKDDY KFELRDTD S+ANALRRVMISEVPT+AIDLVEIEVNSSVLNDE
Sbjct: 1 YARMPRVKIRELKDDYMKFELRDTDASVANALRRVMISEVPTIAIDLVEIEVNSSVLNDE 60
Query: 286 FIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDL 465
FIAHRLGLIPLTSERAM+MRFSRDCDACDGDGQ E+CSVEFHLR KCITDQTLDV+S+DL
Sbjct: 61 FIAHRLGLIPLTSERAMAMRFSRDCDACDGDGQCEYCSVEFHLRVKCITDQTLDVSSKDL 120
Query: 466 YSADPTVTTVDFGIDSSGADSSKQ---RGIIIVKLRRGQELK 582
S+D TVT VD G D+S + RGIIIVKLRRGQEL+
Sbjct: 121 ISSDHTVTPVDV----PGGDASVESDGRGIIIVKLRRGQELR 158
>tr|A9SHD1|A9SHD1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_129844 PE=4 SV=1
Length = 324
Score = 228 bits (581), Expect = 2e-058
Identities = 112/161 (69%), Positives = 133/161 (82%), Gaps = 3/161 (1%)
Frame = +1
Query: 103 TYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLND 282
+YQRFP V+IR++KDD KFELRDTD S+ANALRR+MI+EVPT+AIDLVEIE NSSVLND
Sbjct: 5 SYQRFPTVRIRDIKDDVLKFELRDTDASIANALRRIMIAEVPTLAIDLVEIESNSSVLND 64
Query: 283 EFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRD 462
EF+AHRLGLIP+ S+RAM MR SRDCDACDGDG+ E+CS+EFHL KC DQTLDVTS D
Sbjct: 65 EFLAHRLGLIPIVSDRAMEMRLSRDCDACDGDGRCEYCSIEFHLSVKCTGDQTLDVTSLD 124
Query: 463 LYSADPTVTTVDF---GIDSSGADSSKQRGIIIVKLRRGQE 576
L S+DP++ VD D G +S+ RGI+IVKLR+GQE
Sbjct: 125 LVSSDPSIIPVDAAGRAADMGGFESNDTRGILIVKLRKGQE 165
>tr|D5ADF1|D5ADF1_PICSI Putative uncharacterized protein OS=Picea sitchensis
PE=2 SV=1
Length = 330
Score = 227 bits (578), Expect = 6e-058
Identities = 118/162 (72%), Positives = 131/162 (80%), Gaps = 3/162 (1%)
Frame = +1
Query: 100 ATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLN 279
++YQRFP VKIRE+KDDY KFEL++TD S+ANALRRVMI EVPT+AIDLVEIE NSSVLN
Sbjct: 9 SSYQRFPTVKIREMKDDYMKFELKNTDPSIANALRRVMIGEVPTIAIDLVEIESNSSVLN 68
Query: 280 DEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSR 459
DEF+AHRLGLIPL SERAM MRFSRDCD CDGD Q +CSVEF L KC DQTLDVTS
Sbjct: 69 DEFLAHRLGLIPLISERAMDMRFSRDCDTCDGDAQCHYCSVEFKLNVKCDGDQTLDVTSL 128
Query: 460 DLYSAD---PTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQE 576
DL S+D V VD D + D+S+QRGIIIVKLRRGQE
Sbjct: 129 DLVSSDMRENPVVAVDRAADMNVFDASEQRGIIIVKLRRGQE 170
>tr|B8BCX6|B8BCX6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp.
indica GN=OsI_30378 PE=4 SV=1
Length = 330
Score = 218 bits (553), Expect = 4e-055
Identities = 110/135 (81%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFP+V+IRELKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 7 GVSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 66
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDVT 453
NDEFIAHRLGLIPLTS AM+MRFSRDCDACDGDG E+CSVEFHL A+ +DQTL+VT
Sbjct: 67 NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 126
Query: 454 SRDLYSADPTVTTVD 498
S DL S DP V VD
Sbjct: 127 SNDLRSTDPKVCPVD 141
>tr|Q6YX88|Q6YX88_ORYSJ Os09g0110400 protein OS=Oryza sativa subsp. japonica
GN=P0646B04.12 PE=2 SV=1
Length = 330
Score = 218 bits (553), Expect = 4e-055
Identities = 110/135 (81%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
G +YQRFP+V+IRELKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 7 GVSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 66
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDVT 453
NDEFIAHRLGLIPLTS AM+MRFSRDCDACDGDG E+CSVEFHL A+ +DQTL+VT
Sbjct: 67 NDEFIAHRLGLIPLTSAAAMAMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 126
Query: 454 SRDLYSADPTVTTVD 498
S DL S DP V VD
Sbjct: 127 SNDLRSTDPKVCPVD 141
>tr|C5X7D7|C5X7D7_SORBI Putative uncharacterized protein Sb02g014460 OS=Sorghum
bicolor GN=Sb02g014460 PE=4 SV=1
Length = 328
Score = 217 bits (552), Expect = 6e-055
Identities = 110/135 (81%), Positives = 119/135 (88%), Gaps = 1/135 (0%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVL 276
GA+YQRFP+V+IR+LKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSVL
Sbjct: 6 GASYQRFPRVRIRDLKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSVL 65
Query: 277 NDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDVT 453
NDEFIAHRLGLIPLTS AM MRFSRDCDACDGDG E+CSVEFHL A+ +DQTL+VT
Sbjct: 66 NDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQTLEVT 125
Query: 454 SRDLYSADPTVTTVD 498
S DL S DP V VD
Sbjct: 126 SNDLRSMDPKVCPVD 140
>tr|B6TCC3|B6TCC3_MAIZE DNA-directed RNA polymerase II 36 kDa polypeptide A
OS=Zea mays PE=2 SV=1
Length = 328
Score = 216 bits (548), Expect = 2e-054
Identities = 110/136 (80%), Positives = 117/136 (86%), Gaps = 1/136 (0%)
Frame = +1
Query: 94 SGATYQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSV 273
SG +YQRFP+V+IRELKDDYAKFELRDTD SMANALRRVMI+EVPTVAIDLVEIEVNSSV
Sbjct: 5 SGTSYQRFPRVRIRELKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEVNSSV 64
Query: 274 LNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCI-TDQTLDV 450
LNDEFIAHRLGLIPLTS AM MRFSRDCDACDGDG E+CSVEFHL +DQTL+V
Sbjct: 65 LNDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLSVHATDSDQTLEV 124
Query: 451 TSRDLYSADPTVTTVD 498
TS DL S DP V VD
Sbjct: 125 TSNDLRSMDPKVCPVD 140
>tr|A9SM40|A9SM40_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_132119 PE=4 SV=1
Length = 385
Score = 161 bits (407), Expect = 4e-038
Identities = 86/163 (52%), Positives = 108/163 (66%), Gaps = 2/163 (1%)
Frame = +1
Query: 97 GATYQRFPKVKIRELKD--DYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSS 270
G +Y R P V I E + +F+L +TDVSMAN+LRR M+ EVPT+A DLVEIE+NSS
Sbjct: 17 GVSYHRLPTVSIMESMSSRNVLRFKLENTDVSMANSLRRCMMVEVPTLAFDLVEIEMNSS 76
Query: 271 VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDV 450
VL DEFIAHRLGLIPLTS+RAM M F +CD+C GD + C+VEF L K D+ DV
Sbjct: 77 VLTDEFIAHRLGLIPLTSDRAMEMVFPSECDSCPGDRSCQNCTVEFLLSVKATEDRIKDV 136
Query: 451 TSRDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQEL 579
T RDL S++ V V+ +D G + I I KL +GQE+
Sbjct: 137 TQRDLKSSNDAVVPVEIDVDKQGVLEECKMDICIAKLYKGQEI 179
>tr|D2W3Y1|D2W3Y1_NAEGR Predicted protein OS=Naegleria gruberi
GN=NAEGRDRAFT_61034 PE=4 SV=1
Length = 324
Score = 141 bits (354), Expect = 5e-032
Identities = 80/154 (51%), Positives = 102/154 (66%), Gaps = 5/154 (3%)
Frame = +1
Query: 121 KVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAHR 300
++ I L D+Y KF+L + D S+ANALRR+MI+EVPT+AIDLVE E+NSSVL+DEFIAHR
Sbjct: 12 QLSILALTDEYCKFKLSNVDTSIANALRRIMIAEVPTLAIDLVEFEMNSSVLHDEFIAHR 71
Query: 301 LGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDLYSADP 480
LGLIPLT S ++ DC G E CSVE L KC T+ DVTS DL S +P
Sbjct: 72 LGLIPLTCLNINSFSYTSDCSC---TGHCEKCSVELTLHVKC-TESHRDVTSNDLISNNP 127
Query: 481 TVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
+ +S + ++ GI IVKL+RGQE+K
Sbjct: 128 SCAPCTLSA-TSRDNENEHNGITIVKLKRGQEIK 160
>tr|Q9P5U3|Q9P5U3_NEUCR DNA-directed RNA polymerase II 33 kDa polypeptide
OS=Neurospora crassa GN=B5O22.090 PE=4 SV=1
Length = 337
Score = 139 bits (350), Expect = 2e-031
Identities = 78/155 (50%), Positives = 101/155 (65%), Gaps = 6/155 (3%)
Frame = +1
Query: 118 PKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAH 297
P VKI + + KFEL +T++S AN+LRRVM++E+PT+AIDLVEIE NSSVL DEFIAH
Sbjct: 16 PVVKISQADNTRVKFELSNTELSFANSLRRVMLAEIPTIAIDLVEIEANSSVLADEFIAH 75
Query: 298 RLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDLYSAD 477
RLGLIPL +E + +SRDCD D E CSV +L AKC D + V +RDL
Sbjct: 76 RLGLIPLNAEGIEQLLYSRDCDC---DEYCEHCSVTLNLHAKCTGDDIMQVCARDLVPVG 132
Query: 478 PTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
V V + S + + +G +I+KLR GQE+K
Sbjct: 133 DRVNQV---LGSPIINDPEGQGPLILKLRHGQEIK 164
>tr|D0NY82|D0NY82_PHYIN DNA-directed RNA polymerase II 36 kDa polypeptide A
OS=Phytophthora infestans T30-4 GN=PITG_18113 PE=4 SV=1
Length = 241
Score = 139 bits (349), Expect = 2e-031
Identities = 78/164 (47%), Positives = 109/164 (66%), Gaps = 10/164 (6%)
Frame = +1
Query: 106 YQRFPKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDE 285
+ RFPK+ ++EL+DD+ +FEL +TD S+ANA+RRVMISEVPT+AIDLV IE+N+SV+ DE
Sbjct: 3 HPRFPKIDVQELRDDFIRFELSETDASVANAIRRVMISEVPTLAIDLVSIEINTSVMTDE 62
Query: 286 FIAHRLGLIPLTSERAMS-----MRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDV 450
F+AHRLG+IPL + + +S+DCD CD + CSVEF L L V
Sbjct: 63 FLAHRLGMIPLNFDGGLENFRQRFVYSQDCD-CDENCPN--CSVEFTLDVTA-DSGVLSV 118
Query: 451 TSRDLYSADPTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
TS L S+DP + V+F + ++++ G+II KL GQ L+
Sbjct: 119 TSEALKSSDPYIRPVNFSSEEE-LNNTQDSGVIIAKLGPGQRLR 161
>tr|Q2GNN7|Q2GNN7_CHAGB Putative uncharacterized protein OS=Chaetomium globosum
GN=CHGG_10417 PE=4 SV=1
Length = 338
Score = 138 bits (346), Expect = 4e-031
Identities = 77/155 (49%), Positives = 100/155 (64%), Gaps = 6/155 (3%)
Frame = +1
Query: 118 PKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAH 297
P VKI + KFEL + D++ AN+LRRVM+ E+PT+AIDLVEIE NSSVL DEFIAH
Sbjct: 16 PVVKISQADPIRVKFELSNADIAFANSLRRVMLGEIPTIAIDLVEIEENSSVLADEFIAH 75
Query: 298 RLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDLYSAD 477
RLGLIPL ++ + F+RDCD DG E CSV L AKC D+ + V +RDL
Sbjct: 76 RLGLIPLNADGVEGLLFARDCDC---DGCCEHCSVRLTLHAKCTGDENMHVFARDLV--- 129
Query: 478 PTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
PT ++ + + S+ G +I+KLR GQE+K
Sbjct: 130 PTGERINQVLGTPVVSDSEGLGALILKLRPGQEIK 164
>tr|D1ZQ03|D1ZQ03_SORMA Whole genome shotgun sequence assembly, scaffold_74
OS=Sordaria macrospora GN=SMAC_06213 PE=4 SV=1
Length = 311
Score = 137 bits (343), Expect = 1e-030
Identities = 77/155 (49%), Positives = 99/155 (63%), Gaps = 6/155 (3%)
Frame = +1
Query: 118 PKVKIRELKDDYAKFELRDTDVSMANALRRVMISEVPTVAIDLVEIEVNSSVLNDEFIAH 297
P VKI + KFEL +T++ AN+LRRVM++E+PT+AIDLVEIE NSSVL DEFIAH
Sbjct: 16 PVVKISQADSTRVKFELSNTELCFANSLRRVMLAEIPTIAIDLVEIEANSSVLADEFIAH 75
Query: 298 RLGLIPLTSERAMSMRFSRDCDACDGDGQGEFCSVEFHLRAKCITDQTLDVTSRDLYSAD 477
RLGLIPL +E + +SRDCD D E CSV +L AKC D + V +RDL
Sbjct: 76 RLGLIPLNAEGIDQLLYSRDCDC---DEYCEHCSVTLNLHAKCTGDDIMQVCARDLVPVG 132
Query: 478 PTVTTVDFGIDSSGADSSKQRGIIIVKLRRGQELK 582
V V + S + + +G +I+KLR GQE+K
Sbjct: 133 DRVNQV---LGSPIINDPEGQGPLILKLRHGQEIK 164
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,346,859,520,435
Number of Sequences: 11397958
Number of Extensions: 4346859520435
Number of Successful Extensions: 1558967938
Number of sequences better than 0.0: 0
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