BLASTX 7.6.2
Query= UN64741 /QuerySize=474
(473 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|8570440|gb|AAF76467.1|AC020622_1 Contains similarity to excis... 119 1e-025
gi|166221587|sp|Q9LPD2.2|GENL1_ARATH RecName: Full=Flap endonucl... 119 1e-025
gi|334182222|ref|NP_171691.2| 5'-3' exonuclease-like protein [Ar... 119 1e-025
gi|334182224|ref|NP_001184887.1| 5'-3' exonuclease-like protein ... 119 1e-025
gi|297842934|ref|XP_002889348.1| hypothetical protein ARALYDRAFT... 118 3e-025
gi|255541446|ref|XP_002511787.1| DNA binding protein, putative [... 69 2e-010
>gi|8570440|gb|AAF76467.1|AC020622_1 Contains similarity to excision repair
protein ERCC5 from Homo sapiens gi|1082359 and contains XPG N-terminal
PF|00752 and XPG I-region PF|00867 domains [Arabidopsis thaliana]
Length = 497
Score = 119 bits (296), Expect = 1e-025
Identities = 74/111 (66%), Positives = 80/111 (72%), Gaps = 13/111 (11%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKKNVCEGAA----ASSMGAQRSITDFYRS 306
LLTDE +GLVQ AFP+ETEHFL EKKLRESKKKNV E A++MG QRSITDFYRS
Sbjct: 393 LLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRS 452
Query: 305 TKAAAAAATPAQSVDTGGSSIAFAFVEKKRQANSGSFS---KSVRGRFLFG 162
K AAA QS++TGGSS A A EKKRQA S S S KSVR R LFG
Sbjct: 453 AKKAAA----GQSIETGGSSKASA--EKKRQATSTSSSNLTKSVRRRLLFG 497
>gi|166221587|sp|Q9LPD2.2|GENL1_ARATH RecName: Full=Flap endonuclease GEN-like
1
Length = 599
Score = 119 bits (296), Expect = 1e-025
Identities = 74/111 (66%), Positives = 80/111 (72%), Gaps = 13/111 (11%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKKNVCEGAA----ASSMGAQRSITDFYRS 306
LLTDE +GLVQ AFP+ETEHFL EKKLRESKKKNV E A++MG QRSITDFYRS
Sbjct: 495 LLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRS 554
Query: 305 TKAAAAAATPAQSVDTGGSSIAFAFVEKKRQANSGSFS---KSVRGRFLFG 162
K AAA QS++TGGSS A A EKKRQA S S S KSVR R LFG
Sbjct: 555 AKKAAA----GQSIETGGSSKASA--EKKRQATSTSSSNLTKSVRRRLLFG 599
>gi|334182222|ref|NP_171691.2| 5'-3' exonuclease-like protein [Arabidopsis
thaliana]
Length = 599
Score = 119 bits (296), Expect = 1e-025
Identities = 74/111 (66%), Positives = 80/111 (72%), Gaps = 13/111 (11%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKKNVCEGAA----ASSMGAQRSITDFYRS 306
LLTDE +GLVQ AFP+ETEHFL EKKLRESKKKNV E A++MG QRSITDFYRS
Sbjct: 495 LLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRS 554
Query: 305 TKAAAAAATPAQSVDTGGSSIAFAFVEKKRQANSGSFS---KSVRGRFLFG 162
K AAA QS++TGGSS A A EKKRQA S S S KSVR R LFG
Sbjct: 555 AKKAAA----GQSIETGGSSKASA--EKKRQATSTSSSNLTKSVRRRLLFG 599
>gi|334182224|ref|NP_001184887.1| 5'-3' exonuclease-like protein [Arabidopsis
thaliana]
Length = 598
Score = 119 bits (296), Expect = 1e-025
Identities = 74/111 (66%), Positives = 80/111 (72%), Gaps = 13/111 (11%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKKNVCEGAA----ASSMGAQRSITDFYRS 306
LLTDE +GLVQ AFP+ETEHFL EKKLRESKKKNV E A++MG QRSITDFYRS
Sbjct: 494 LLTDECIGLVQSAFPDETEHFLHEKKLRESKKKNVSEEETATPRATTMGVQRSITDFYRS 553
Query: 305 TKAAAAAATPAQSVDTGGSSIAFAFVEKKRQANSGSFS---KSVRGRFLFG 162
K AAA QS++TGGSS A A EKKRQA S S S KSVR R LFG
Sbjct: 554 AKKAAA----GQSIETGGSSKASA--EKKRQATSTSSSNLTKSVRRRLLFG 598
>gi|297842934|ref|XP_002889348.1| hypothetical protein ARALYDRAFT_311256
[Arabidopsis lyrata subsp. lyrata]
Length = 590
Score = 118 bits (294), Expect = 3e-025
Identities = 71/109 (65%), Positives = 80/109 (73%), Gaps = 13/109 (11%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKKNVCEGAAA---SSMGAQRSITDFYRST 303
LLTDE +GLV+ AFP+ETEHFL EKKLRESKKKNV E A ++MG QRSITDFYRS
Sbjct: 488 LLTDECIGLVESAFPDETEHFLHEKKLRESKKKNVSEETATPRPTTMGVQRSITDFYRSA 547
Query: 302 KAAAAAATPAQSVDTGGSSIAFAFVEKKRQA---NSGSFSKSVRGRFLF 165
KAA P QS++TGGSS A A EKKRQA +S + SKSVR R LF
Sbjct: 548 KAA-----PGQSIETGGSSRASA--EKKRQATSTSSSNLSKSVRRRLLF 589
>gi|255541446|ref|XP_002511787.1| DNA binding protein, putative [Ricinus
communis]
Length = 609
Score = 69 bits (166), Expect = 2e-010
Identities = 43/106 (40%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Frame = -1
Query: 473 LLTDEWVGLVQFAFPEETEHFLQEKKLRESKKK---NVCEGAAASSMGAQRSITDFYRST 303
LLTDE + LVQ AFP+ + FL+EK+ +ESK++ + + + S G Q +IT+FYRST
Sbjct: 504 LLTDENMDLVQNAFPDAVDKFLKEKEQKESKRRLSSSTEKSESVKSKGVQLNITEFYRST 563
Query: 302 KAAAAAATPAQSVDTGGSSIAFAFVEKKRQANSGSFSKSVRGRFLF 165
K AA+ + D + E KR+ +S + KSVR R LF
Sbjct: 564 KVQFAASGGEEQADCSENQDDVISTE-KRKISSSNLPKSVRRRLLF 608
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,523,217,830
Number of Sequences: 15229318
Number of Extensions: 141523217830
Number of Successful Extensions: 45922609
Number of sequences better than 0.0: 0
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