BLASTX 7.6.2
Query= UN64760 /QuerySize=584
(583 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36960.1 | Symbols: | RNA recognition motif (... 246 8e-066
TAIR9_protein||AT4G36960.2 | Symbols: | RNA recognition motif (... 246 8e-066
TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear r... 62 3e-010
TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear r... 62 3e-010
TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (... 60 7e-010
TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (... 55 2e-008
TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (... 55 2e-008
TAIR9_protein||AT3G13224.1 | Symbols: | RNA recognition motif (... 55 3e-008
TAIR9_protein||AT3G13224.2 | Symbols: | RNA recognition motif (... 55 3e-008
TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear r... 55 3e-008
TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (... 55 4e-008
TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear r... 54 6e-008
TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear r... 54 6e-008
TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (... 54 8e-008
TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (... 54 8e-008
TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (... 54 8e-008
>TAIR9_protein||AT4G36960.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:17427349-17429589 FORWARD
Length = 380
Score = 246 bits (627), Expect = 8e-066
Identities = 123/143 (86%), Positives = 126/143 (88%), Gaps = 7/143 (4%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
GRLPQEASVDDLRDYFGRFG IQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI
Sbjct: 245 GRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 304
Query: 403 CGQEVAIDSATPLDEAGGPSGAGGGGGSFFSSSRPEHFGGYAGGGPMRTFGRMYGGAMSL 224
CGQEVAIDSATPLDEAG +GA S SSSRPE+FGGY GGPMR FGRMYGG MSL
Sbjct: 305 CGQEVAIDSATPLDEAGPSAGA----SSMLSSSRPEYFGGY--GGPMRAFGRMYGG-MSL 357
Query: 223 DDWGYGVPNARPSRSDWRYRPY* 155
DDWGYG+PNARPSR D RYRPY*
Sbjct: 358 DDWGYGMPNARPSRPDRRYRPY* 380
Score = 52 bits (123), Expect = 2e-007
Identities = 25/78 (32%), Positives = 40/78 (51%)
Frame = -1
Query: 577 LPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEICG 398
+P + D L+DY +FG ++D + KD RGFG+VTFA A + H +
Sbjct: 10 IPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKGEHFLGN 69
Query: 397 QEVAIDSATPLDEAGGPS 344
+ + + ATP +E P+
Sbjct: 70 RILEVKVATPKEEMRQPA 87
>TAIR9_protein||AT4G36960.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:17427349-17429589 FORWARD
Length = 380
Score = 246 bits (627), Expect = 8e-066
Identities = 123/143 (86%), Positives = 126/143 (88%), Gaps = 7/143 (4%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
GRLPQEASVDDLRDYFGRFG IQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI
Sbjct: 245 GRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 304
Query: 403 CGQEVAIDSATPLDEAGGPSGAGGGGGSFFSSSRPEHFGGYAGGGPMRTFGRMYGGAMSL 224
CGQEVAIDSATPLDEAG +GA S SSSRPE+FGGY GGPMR FGRMYGG MSL
Sbjct: 305 CGQEVAIDSATPLDEAGPSAGA----SSMLSSSRPEYFGGY--GGPMRAFGRMYGG-MSL 357
Query: 223 DDWGYGVPNARPSRSDWRYRPY* 155
DDWGYG+PNARPSR D RYRPY*
Sbjct: 358 DDWGYGMPNARPSRPDRRYRPY* 380
>TAIR9_protein||AT5G47620.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 62 bits (148), Expect = 3e-010
Identities = 34/75 (45%), Positives = 41/75 (54%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + E S D LRDYF FG + +A I KD RGFGFV FA+ VA+RV H I
Sbjct: 11 GGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLKHII 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGKIVEAKKAVPRDD 85
>TAIR9_protein||AT5G47620.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr5:19302548-19304278
REVERSE
Length = 432
Score = 62 bits (148), Expect = 3e-010
Identities = 34/75 (45%), Positives = 41/75 (54%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + E S D LRDYF FG + +A I KD RGFGFV FA+ VA+RV H I
Sbjct: 11 GGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVAERVVLLKHII 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGKIVEAKKAVPRDD 85
>TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:16225483-16227423 FORWARD
Length = 424
Score = 60 bits (145), Expect = 7e-010
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G L +E + + +FG++G I D+ I KD K RGFGFVT+A++ V D+V + +H I
Sbjct: 47 GGLARETTSAEFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVIQDNHII 106
Query: 403 CGQEVAIDSATP 368
G++V I P
Sbjct: 107 IGKQVEIKRTIP 118
>TAIR9_protein||AT4G26650.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445552-13447592 FORWARD
Length = 456
Score = 55 bits (132), Expect = 2e-008
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + L++YFG++G + +A I +D RGFGF+ FA+ VA+RV H I
Sbjct: 20 GGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKHII 79
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 80 DGRTVEAKKAVPRDD 94
>TAIR9_protein||AT4G26650.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:13445265-13447592 FORWARD
Length = 453
Score = 55 bits (132), Expect = 2e-008
Identities = 27/75 (36%), Positives = 42/75 (56%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + L++YFG++G + +A I +D RGFGF+ FA+ VA+RV H I
Sbjct: 17 GGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMDKHII 76
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 77 DGRTVEAKKAVPRDD 91
>TAIR9_protein||AT3G13224.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:4254848-4256014 FORWARD
Length = 232
Score = 55 bits (131), Expect = 3e-008
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G L ++ + +FG++G I D+ I +D RGFGF+TFA+ V D+V +H I
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVI 83
Query: 403 CGQEVAIDSATPLDEAGGPS 344
G++V I P G S
Sbjct: 84 NGKQVEIKRTIPKGAGGNQS 103
>TAIR9_protein||AT3G13224.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:4254848-4256621 FORWARD
Length = 359
Score = 55 bits (131), Expect = 3e-008
Identities = 28/80 (35%), Positives = 42/80 (52%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G L ++ + +FG++G I D+ I +D RGFGF+TFA+ V D+V +H I
Sbjct: 24 GGLHKDTTNTVFNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVI 83
Query: 403 CGQEVAIDSATPLDEAGGPS 344
G++V I P G S
Sbjct: 84 NGKQVEIKRTIPKGAGGNQS 103
>TAIR9_protein||AT4G14300.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr4:8231179-8232785
FORWARD
Length = 412
Score = 55 bits (131), Expect = 3e-008
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + E D LR++F +G + A + +D RGFGFV F++ V DRV + H I
Sbjct: 11 GGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSI 70
Query: 403 CGQEVAIDSATPLDE------AGGPSGAGGGGGSFFSSSRPEHFGG 284
+EV + A +E G + + GG ++ ++ GG
Sbjct: 71 DTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGG 116
>TAIR9_protein||AT1G17640.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:6067394-6069098 REVERSE
Length = 370
Score = 55 bits (130), Expect = 4e-008
Identities = 26/72 (36%), Positives = 40/72 (55%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + E + + +YFG+FG + D+ I D RGFGFVTFA++ VA++V H I
Sbjct: 71 GGVSWETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVI 130
Query: 403 CGQEVAIDSATP 368
++V + P
Sbjct: 131 DDRKVDLKRTLP 142
>TAIR9_protein||AT3G07810.1 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495052
FORWARD
Length = 495
Score = 54 bits (128), Expect = 6e-008
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + + L++YF FG + +A I KD RGFGFV FA+ VA+ V H I
Sbjct: 11 GGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHNI 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGRLVEAKKAVPRDD 85
>TAIR9_protein||AT3G07810.2 | Symbols: | heterogeneous nuclear
ribonucleoprotein, putative / hnRNP, putative | chr3:2492875-2495102
FORWARD
Length = 496
Score = 54 bits (128), Expect = 6e-008
Identities = 28/75 (37%), Positives = 40/75 (53%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + + L++YF FG + +A I KD RGFGFV FA+ VA+ V H I
Sbjct: 11 GGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITEKHNI 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGRLVEAKKAVPRDD 85
>TAIR9_protein||AT5G55550.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502077-22503658 REVERSE
Length = 449
Score = 54 bits (127), Expect = 8e-008
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV H I
Sbjct: 11 GGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHII 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGRTVEAKKAVPRDD 85
Score = 54 bits (127), Expect = 8e-008
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRS-HE 407
G LP + ++ ++YF +FG I D + D RGFGF+TF + DRV ++ HE
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 406 ICGQEVAIDSATP 368
+ G+ V + A P
Sbjct: 175 LNGKLVEVKRAVP 187
>TAIR9_protein||AT5G55550.3 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 54 bits (127), Expect = 8e-008
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV H I
Sbjct: 11 GGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHII 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGRTVEAKKAVPRDD 85
Score = 54 bits (127), Expect = 8e-008
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRS-HE 407
G LP + ++ ++YF +FG I D + D RGFGF+TF + DRV ++ HE
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 406 ICGQEVAIDSATP 368
+ G+ V + A P
Sbjct: 175 LNGKLVEVKRAVP 187
>TAIR9_protein||AT5G55550.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:22502135-22503658 REVERSE
Length = 461
Score = 54 bits (127), Expect = 8e-008
Identities = 27/75 (36%), Positives = 40/75 (53%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHEI 404
G + + + LRDYF +G + +A I +D RGFGF+ FA+ V++RV H I
Sbjct: 11 GGISWDTDEERLRDYFSNYGDVVEAVIMRDRATGRARGFGFIVFADPCVSERVIMDKHII 70
Query: 403 CGQEVAIDSATPLDE 359
G+ V A P D+
Sbjct: 71 DGRTVEAKKAVPRDD 85
Score = 54 bits (127), Expect = 8e-008
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = -1
Query: 583 GRLPQEASVDDLRDYFGRFGRIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRS-HE 407
G LP + ++ ++YF +FG I D + D RGFGF+TF + DRV ++ HE
Sbjct: 115 GGLPSSITEEEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSDDAVDRVLHKTFHE 174
Query: 406 ICGQEVAIDSATP 368
+ G+ V + A P
Sbjct: 175 LNGKLVEVKRAVP 187
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,103,697,308
Number of Sequences: 33410
Number of Extensions: 29103697308
Number of Successful Extensions: 969374807
Number of sequences better than 0.0: 0
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