BLASTX 7.6.2
Query= UN64836 /QuerySize=644
(643 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding... 121 6e-028
TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding... 121 6e-028
TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING... 53 1e-007
>TAIR9_protein||AT3G26932.1 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 121 bits (301), Expect = 6e-028
Identities = 71/126 (56%), Positives = 82/126 (65%), Gaps = 21/126 (16%)
Frame = -2
Query: 636 YTNEASTSSSSAKHNQTLPPRFWPSRTDLQQQQQESK---EKSEEHAGLKQRSPDDDAKP 466
YTNEAS+SS P RFWPSRT+L Q+Q + K EK +E+A KQ DD KP
Sbjct: 226 YTNEASSSSPP-------PQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSL--DDPKP 276
Query: 465 EMIVKSFPLSFNPPPSSPMERRSCYSKLLPFPEMFAGGLGLNHQKLAPAVHMRSVIPVCS 286
EM +K + +P P S R+CYSKLLPFP LNHQKLAPAVH+RSVIPVCS
Sbjct: 277 EMRIK----TSSPSPLSSSVERNCYSKLLPFPSFV-----LNHQKLAPAVHIRSVIPVCS 327
Query: 285 APPPKP 268
APPPKP
Sbjct: 328 APPPKP 333
>TAIR9_protein||AT3G26932.2 | Symbols: DRB3 | DRB3 (dsRNA-binding protein 3);
RNA binding / double-stranded RNA binding | chr3:9930460-9931714
REVERSE
Length = 360
Score = 121 bits (301), Expect = 6e-028
Identities = 71/126 (56%), Positives = 82/126 (65%), Gaps = 21/126 (16%)
Frame = -2
Query: 636 YTNEASTSSSSAKHNQTLPPRFWPSRTDLQQQQQESK---EKSEEHAGLKQRSPDDDAKP 466
YTNEAS+SS P RFWPSRT+L Q+Q + K EK +E+A KQ DD KP
Sbjct: 226 YTNEASSSSPP-------PQRFWPSRTNLTQEQSKVKSLLEKCQEYAEKKQSL--DDPKP 276
Query: 465 EMIVKSFPLSFNPPPSSPMERRSCYSKLLPFPEMFAGGLGLNHQKLAPAVHMRSVIPVCS 286
EM +K + +P P S R+CYSKLLPFP LNHQKLAPAVH+RSVIPVCS
Sbjct: 277 EMRIK----TSSPSPLSSSVERNCYSKLLPFPSFV-----LNHQKLAPAVHIRSVIPVCS 327
Query: 285 APPPKP 268
APPPKP
Sbjct: 328 APPPKP 333
>TAIR9_protein||AT5G41070.1 | Symbols: DRB5 | DRB5 (DSRNA-BINDING PROTEIN 5);
double-stranded RNA binding | chr5:16438547-16439916 FORWARD
Length = 394
Score = 53 bits (126), Expect = 1e-007
Identities = 27/45 (60%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Frame = -2
Query: 390 SKLLPFPEM----FAGGLGLNHQKLAPAVHMRSVIPVCSAPPPKP 268
SK +PF +M F GG +N LAPAV MRSVIPV +APPPKP
Sbjct: 290 SKQMPFSDMNRYNFVGGCSVNPYSLAPAVQMRSVIPVFAAPPPKP 334
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,103,697,308
Number of Sequences: 33410
Number of Extensions: 29103697308
Number of Successful Extensions: 969374807
Number of sequences better than 0.0: 0
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