BLASTX 7.6.2
Query= UN65057 /QuerySize=771
(770 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LPD2|GENL1_ARATH Flap endonuclease GEN-like 1 OS=Arabidopsi... 364 4e-100
sp|Q64MA3|GENL1_ORYSJ Flap endonuclease GEN-like 1 OS=Oryza sati... 272 2e-072
sp|Q17RS7|GEN_HUMAN Flap endonuclease GEN homolog 1 OS=Homo sapi... 132 4e-030
sp|Q8BMI4|GEN_MOUSE Flap endonuclease GEN homolog 1 OS=Mus muscu... 131 5e-030
sp|Q9VRJ0|GEN_DROME Flap endonuclease GEN OS=Drosophila melanoga... 91 8e-018
sp|Q29FC1|GEN_DROPS Flap endonuclease GEN OS=Drosophila pseudoob... 90 1e-017
sp|Q8W5R1|GENL2_ORYSJ Flap endonuclease GEN-like 2 OS=Oryza sati... 85 5e-016
sp|Q9ATY5|UVH3_ARATH DNA repair protein UVH3 OS=Arabidopsis thal... 84 1e-015
sp|Q9M2Z3|GENL2_ARATH Flap endonuclease GEN-like 2 OS=Arabidopsi... 79 2e-014
sp|P28706|RAD13_SCHPO DNA repair protein rad13 OS=Schizosaccharo... 67 9e-011
sp|P07276|RAD2_YEAST DNA repair protein RAD2 OS=Saccharomyces ce... 65 3e-010
sp|P35689|ERCC5_MOUSE DNA repair protein complementing XP-G cell... 65 4e-010
sp|P14629|ERCC5_XENLA DNA repair protein complementing XP-G cell... 64 8e-010
sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 P... 64 1e-009
sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1... 64 1e-009
sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1... 64 1e-009
sp|A6UX46|FEN_META3 Flap structure-specific endonuclease OS=Meth... 63 2e-009
sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cell... 62 3e-009
sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN... 60 1e-008
sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp... 54 1e-006
>sp|Q9LPD2|GENL1_ARATH Flap endonuclease GEN-like 1 OS=Arabidopsis thaliana
GN=GEN1 PE=2 SV=2
Length = 599
Score = 364 bits (934), Expect = 4e-100
Identities = 180/216 (83%), Positives = 195/216 (90%), Gaps = 4/216 (1%)
Frame = +3
Query: 132 MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVKGFALKPHLRLTFFRTI 311
MGVGG FWDL+RPY + +G D+LR KRVAVDLSFWI+Q+ETAVKGF LKPHLRLTFFRTI
Sbjct: 1 MGVGGNFWDLLRPYAQQQGFDFLRNKRVAVDLSFWIVQHETAVKGFVLKPHLRLTFFRTI 60
Query: 312 NLFSKFGAYPVFVVDGTPSPLKSQTRISRFYRSSGIDTSSL---QEGLVSVERNKQFCEW 482
NLFSKFGAYPVFVVDGTPSPLKSQ RISRF+RSSGIDT +L ++G VSVERNK F EW
Sbjct: 61 NLFSKFGAYPVFVVDGTPSPLKSQARISRFFRSSGIDTCNLPVIKDG-VSVERNKLFSEW 119
Query: 483 VSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPN 662
V ECVELL+LLGIPVLKANGEAEALCAQLNS GFVDACITPDSDAFLFGA VIK IKPN
Sbjct: 120 VRECVELLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPN 179
Query: 663 STEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDFD 770
S EPFECYHMS IE+GLGLKR+HLIAISLL+GND+D
Sbjct: 180 SREPFECYHMSHIESGLGLKRKHLIAISLLVGNDYD 215
>sp|Q64MA3|GENL1_ORYSJ Flap endonuclease GEN-like 1 OS=Oryza sativa subsp.
japonica GN=RAD PE=2 SV=1
Length = 629
Score = 272 bits (695), Expect = 2e-072
Identities = 133/223 (59%), Positives = 172/223 (77%), Gaps = 10/223 (4%)
Frame = +3
Query: 132 MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVKG---FALKPHLRLTFF 302
MGVGG FWDL++PY R+EG+ YLR +RVAVDLSFW++ + A++ A PHLR FF
Sbjct: 1 MGVGGSFWDLLKPYARHEGAGYLRGRRVAVDLSFWVVSHSAAIRARSPHARLPHLRTLFF 60
Query: 303 RTINLFSKFGAYPVFVVDGTPSPLKSQTRISRFYRSSGIDTSSL--QEGLVSVE-----R 461
RT++LFSK GA+PVFVVDG PSPLKSQ R +RF+R SG+D ++L E S + R
Sbjct: 61 RTLSLFSKMGAFPVFVVDGQPSPLKSQVRAARFFRGSGMDLAALPSTEAEASADALVQPR 120
Query: 462 NKQFCEWVSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSV 641
N +F +V +CVELL+ LG+PVL+A GE EALCAQLN+ G VDACIT DSDAFLFGA +V
Sbjct: 121 NAKFTRYVEDCVELLEYLGMPVLRAKGEGEALCAQLNNQGHVDACITSDSDAFLFGAKTV 180
Query: 642 IKSIKPNSTEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDFD 770
IK ++ N EPFECY+M+DIE+GLGLKR+ ++A++LL+G+D D
Sbjct: 181 IKVLRSNCKEPFECYNMADIESGLGLKRKQMVAMALLVGSDHD 223
>sp|Q17RS7|GEN_HUMAN Flap endonuclease GEN homolog 1 OS=Homo sapiens GN=GEN1
PE=2 SV=2
Length = 908
Score = 132 bits (330), Expect = 4e-030
Identities = 80/211 (37%), Positives = 119/211 (56%), Gaps = 14/211 (6%)
Frame = +3
Query: 153 WDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVK--GFALKPHLRLTFFRTINLFSK 326
W ++ P ++ L K +AVDLS W+ + +T K G +KPHLR FFR I+ ++
Sbjct: 7 WQILEPVKQHIPLRNLGGKTIAVDLSLWVCEAQTVKKMMGSVMKPHLRNLFFR-ISYLTQ 65
Query: 327 FGAYPVFVVDGTPSPLKSQT---RISRFYRSSGIDTSSLQEGLVSVERNKQFCEWVSECV 497
VFV++G P LK+ R Y SSG S F + EC+
Sbjct: 66 MDVKLVFVMEGEPPKLKADVISKRNQSRYGSSGKSWS-------QKTGRSHFKSVLRECL 118
Query: 498 ELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNSTEP- 674
+L+ LGIP ++A GEAEA+CA LN+ G VD C+T D D FL+GA +V ++ N+ +P
Sbjct: 119 HMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYGAQTVYRNFTMNTKDPH 178
Query: 675 FECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+CY MS I++ LGL R L+ +++L+G D+
Sbjct: 179 VDCYTMSSIKSKLGLDRDALVGLAILLGCDY 209
>sp|Q8BMI4|GEN_MOUSE Flap endonuclease GEN homolog 1 OS=Mus musculus GN=Gen1
PE=2 SV=2
Length = 908
Score = 131 bits (329), Expect = 5e-030
Identities = 77/208 (37%), Positives = 118/208 (56%), Gaps = 8/208 (3%)
Frame = +3
Query: 153 WDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVK--GFALKPHLRLTFFRTINLFSK 326
W ++ P ++ L K +AVDLS W+ + +T K G KPHLR FFR I+ ++
Sbjct: 7 WQILEPVKQHIHLQDLSGKTIAVDLSLWVCEAQTVKKMIGTVKKPHLRNLFFR-ISYLTQ 65
Query: 327 FGAYPVFVVDGTPSPLKSQTRISRFYRSSGIDTSSLQEGLVSVERNKQFCEWVSECVELL 506
VFV++G P LK+ R G S + F + EC+E+L
Sbjct: 66 MNVKLVFVMEGEPPMLKADVISKRTQTRYGPSGKSRSQ----KTGRSHFKSVLRECLEML 121
Query: 507 KLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNSTEP-FEC 683
+ LG+P ++A GEAEA+CA LN+ G VD C+T D DAFL+GA +V ++ N+ +P +C
Sbjct: 122 ECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLYGAQTVYRNFTMNTKDPHVDC 181
Query: 684 YHMSDIEAGLGLKRRHLIAISLLIGNDF 767
Y +S I++ LGL R L+ +++L+G D+
Sbjct: 182 YTISSIKSKLGLDRDALVGLAVLLGCDY 209
>sp|Q9VRJ0|GEN_DROME Flap endonuclease GEN OS=Drosophila melanogaster GN=Gen
PE=1 SV=1
Length = 726
Score = 91 bits (224), Expect = 8e-018
Identities = 68/221 (30%), Positives = 110/221 (49%), Gaps = 16/221 (7%)
Frame = +3
Query: 132 MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVKGFA-LKPHLRLTFFRT 308
MGV + W ++ P+ + + LR K+VA+DL+ W+ ++ V F + HL+ FFRT
Sbjct: 1 MGV-KELWGVLTPHCERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRT 59
Query: 309 INLFSKFGAYPVFVVDGTPSPLKSQTRISR-FYRSSGIDTSSLQEGLVSV-----ERNKQ 470
L + PVFV++G LKSQ R + G+ + E S + +
Sbjct: 60 CYLIWE-QVTPVFVLEGVAPKLKSQVIAKRNELQFRGVKPKNSPECTQSQPSKGDKGRSR 118
Query: 471 FCEWVSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKS 650
F + +C LL +GI ++ GEAEA CA LN HG VD I+ DSD F +GA V ++
Sbjct: 119 FNHVLKQCETLLLSMGIQCVQGPGEAEAYCAFLNKHGLVDGVISQDSDCFAYGAVRVYRN 178
Query: 651 IKPNST-------EPFECYHMSDIEAGLGLKRRHLIAISLL 752
++ + Y M +I + + ++ +I ++LL
Sbjct: 179 FSVSTQGAQAAAGGAVDIYDMREITSRMDFGQQKIIVMALL 219
>sp|Q29FC1|GEN_DROPS Flap endonuclease GEN OS=Drosophila pseudoobscura
pseudoobscura GN=Gen PE=3 SV=1
Length = 754
Score = 90 bits (222), Expect = 1e-017
Identities = 66/220 (30%), Positives = 109/220 (49%), Gaps = 15/220 (6%)
Frame = +3
Query: 132 MGVGGKFWDLVRPYGRNEGSDYLREKRVAVDLSFWIIQNETAVKGFA-LKPHLRLTFFRT 308
MGV + W ++ P+ + + LR K+VA+DL+ W+ ++ V F + HL+ FFRT
Sbjct: 1 MGV-KELWTVLTPHAERKPINELRGKKVAIDLAGWVCESLNVVDYFVHPRHHLKNLFFRT 59
Query: 309 INLFSKFGAYPVFVVDGTPSPLKSQTRISR----FYRSSGIDTSSLQEGLVSVERNK-QF 473
L + PVFV++G LK Q R F D ++ + V++ + +F
Sbjct: 60 CYLIWE-QVTPVFVLEGVAPKLKGQVIAKRNELQFRGVRPKDAATGTQTAAKVDKGRTRF 118
Query: 474 CEWVSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSI 653
+ +C LL +GI ++ GEAEA A LN HG VD I+ DSD F +GA V ++
Sbjct: 119 NHVLKQCETLLLSMGIQCVQGPGEAEAYAAFLNKHGLVDGVISQDSDCFAYGAIRVYRNF 178
Query: 654 KPNST-------EPFECYHMSDIEAGLGLKRRHLIAISLL 752
++ + Y M +I + + + +I ++LL
Sbjct: 179 SVSTQGAQAAAGGAVDIYDMREITSRMDFGQHKIIVMALL 218
>sp|Q8W5R1|GENL2_ORYSJ Flap endonuclease GEN-like 2 OS=Oryza sativa subsp.
japonica GN=SEND1 PE=2 SV=1
Length = 641
Score = 85 bits (208), Expect = 5e-016
Identities = 57/147 (38%), Positives = 73/147 (49%), Gaps = 5/147 (3%)
Frame = +3
Query: 342 VFVVDGTPSPLKSQTRISRFYRSSGIDTSSLQEG---LVSVERNK--QFCEWVSECVELL 506
+FV DG LK T R S S Q +S+ RNK +F + E L
Sbjct: 72 LFVTDGAIPSLKLATYRRRLGSISHAAKESDQPNSHPSISLRRNKGSEFSCMIKEAKRLG 131
Query: 507 KLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNSTEPFECY 686
LGIP L EAEA CA L+ D C T DSDAFLFGA +V + + CY
Sbjct: 132 MALGIPCLDGLEEAEAQCASLDLESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICY 191
Query: 687 HMSDIEAGLGLKRRHLIAISLLIGNDF 767
M DIE LG R LI++++L+G+D+
Sbjct: 192 EMEDIEKTLGFGRNSLISLAVLLGSDY 218
>sp|Q9ATY5|UVH3_ARATH DNA repair protein UVH3 OS=Arabidopsis thaliana GN=UVH3
PE=2 SV=1
Length = 1479
Score = 84 bits (205), Expect = 1e-015
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 3/132 (2%)
Frame = +3
Query: 378 SQTRISRFYRSSGIDTSSLQEGLVSVERNKQ--FCEWVSECVELLKLLGIPVLKANGEAE 551
S+ I R + SL + +ERN + E +EC ELL++ GIP + A EAE
Sbjct: 889 SEANIEEEIRVLDQEFVSLGDEQRKLERNAESVSSEMFAECQELLQIFGIPYIIAPMEAE 948
Query: 552 ALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNSTEPFECYHMSDIEAGLGLKRRH 731
A CA + VD +T DSD FLFGA SV K+I + + E Y M DIE LGL R
Sbjct: 949 AQCAFMEQSNLVDGIVTDDSDVFLFGARSVYKNIF-DDRKYVETYFMKDIEKELGLSRDK 1007
Query: 732 LIAISLLIGNDF 767
+I +++L+G+D+
Sbjct: 1008 IIRMAMLLGSDY 1019
>sp|Q9M2Z3|GENL2_ARATH Flap endonuclease GEN-like 2 OS=Arabidopsis thaliana
GN=GEN2 PE=2 SV=2
Length = 600
Score = 79 bits (194), Expect = 2e-014
Identities = 56/160 (35%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Frame = +3
Query: 297 FFRTINLFSKFGAYPVFVVDGTPSPLKSQTRISRFYRSSGIDTSSLQEGL-VSVERN--K 467
FF + + V DG +K T R I ++ S++RN
Sbjct: 57 FFHRLRALIALNCSIILVSDGAIPGIKVPTYKRRLKARFEIADDGVEPSKETSLKRNMGS 116
Query: 468 QFCEWVSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIK 647
+F + E + LGI L EAEA CA LNS DAC + DSD FLFGA +V +
Sbjct: 117 EFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSESLCDACFSFDSDIFLFGAKTVYR 176
Query: 648 SIKPNSTEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
I CY M DI+ LGL R LIA++LL+G+D+
Sbjct: 177 EICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGSDY 216
>sp|P28706|RAD13_SCHPO DNA repair protein rad13 OS=Schizosaccharomyces pombe
GN=rad13 PE=2 SV=2
Length = 1112
Score = 67 bits (163), Expect = 9e-011
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Frame = +3
Query: 483 VSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPN 662
+ EC ELL+L G+P + A EAEA C++L VD +T DSD FLFG V +++ N
Sbjct: 757 IKECQELLRLFGLPYIVAPQEAEAQCSKLLELKLVDGIVTDDSDVFLFGGTRVYRNMF-N 815
Query: 663 STEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ E Y M D++ + + LI ++ L+G+D+
Sbjct: 816 QNKFVELYLMDDMKREFNVNQMDLIKLAHLLGSDY 850
>sp|P07276|RAD2_YEAST DNA repair protein RAD2 OS=Saccharomyces cerevisiae
GN=RAD2 PE=1 SV=2
Length = 1031
Score = 65 bits (158), Expect = 3e-010
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 477 EWVSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIK 656
+ + E ELL GIP + A EAEA CA+L VD IT DSD FLFG + K++
Sbjct: 770 DMIKEVQELLSRFGIPYITAPMEAEAQCAELLQLNLVDGIITDDSDVFLFGGTKIYKNMF 829
Query: 657 PNSTEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ E Y I LGL R+++I ++ L+G+D+
Sbjct: 830 -HEKNYVEFYDAESILKLLGLDRKNMIELAQLLGSDY 865
>sp|P35689|ERCC5_MOUSE DNA repair protein complementing XP-G cells homolog
OS=Mus musculus GN=Ercc5 PE=1 SV=3
Length = 1170
Score = 65 bits (157), Expect = 4e-010
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
E ELL+L G+P ++A EAEA CA L+ IT DSD +LFGA V K+ N
Sbjct: 770 ESQELLRLFGVPYIQAPMEAEAQCAMLDLSDQTSGTITDDSDIWLFGARHVYKNFF-NKN 828
Query: 669 EPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ E Y D + LGL R LI ++ L+G+D+
Sbjct: 829 KFVEYYQYVDFYSQLGLDRNKLINLAYLLGSDY 861
>sp|P14629|ERCC5_XENLA DNA repair protein complementing XP-G cells homolog
OS=Xenopus laevis GN=ercc5 PE=2 SV=1
Length = 1196
Score = 64 bits (155), Expect = 8e-010
Identities = 43/123 (34%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Frame = +3
Query: 399 FYRSSGIDTSSLQEGLVSVERNKQFCEWVSECVELLKLLGIPVLKANGEAEALCAQLNSH 578
+ + + + Q+ ++ Q C E ELL+L GIP + A EAEA CA L+
Sbjct: 777 YVQQTSLQAQQQQQERIAATVTGQMC---LESQELLQLFGIPYIVAPMEAEAQCAILDLT 833
Query: 579 GFVDACITPDSDAFLFGAFSVIKSIKPNSTEPFECYHMSDIEAGLGLKRRHLIAISLLIG 758
IT DSD +LFGA V K+ + + E Y +DI LGL R LI ++ L+G
Sbjct: 834 DQTSGTITDDSDIWLFGARHVYKNFF-SQNKHVEYYQYADIHNQLGLDRSKLINLAYLLG 892
Query: 759 NDF 767
+D+
Sbjct: 893 SDY 895
>sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 PE=2 SV=1
Length = 380
Score = 64 bits (153), Expect = 1e-009
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
EC LL L+GIP L A EAEA CA L G V A T D D FG+ +++ + +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 669 E--PFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ P + +H+S I LGL + + + +L+G+D+
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDY 234
>sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1
Length = 380
Score = 64 bits (153), Expect = 1e-009
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
EC LL L+GIP L A EAEA CA L G V A T D D FG+ +++ + +
Sbjct: 140 ECKHLLSLMGIPYLDAPSEAEASCAALVKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 199
Query: 669 E--PFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ P + +H+S I LGL + + + +L+G+D+
Sbjct: 200 KKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDY 234
>sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1 PE=1 SV=1
Length = 378
Score = 64 bits (153), Expect = 1e-009
Identities = 34/95 (35%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
EC LL L+GIP L A EAEA CA L G V A T D D FG+ +++ + +
Sbjct: 138 ECKHLLSLMGIPYLDAPSEAEASCAALAKAGKVYAAATEDMDCLTFGSPVLMRHLTASEA 197
Query: 669 E--PFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ P + +H+S + LGL + + + +L+G+D+
Sbjct: 198 KKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDY 232
>sp|A6UX46|FEN_META3 Flap structure-specific endonuclease OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=fen PE=3 SV=1
Length = 326
Score = 63 bits (152), Expect = 2e-009
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +3
Query: 483 VSECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPN 662
V C +LLKL+GIP + A E EA CA + +G ++ D DA L+GA +++I
Sbjct: 132 VDNCKKLLKLMGIPYIDAPSEGEAQCAHMIKNGDAYCVVSQDYDALLYGAPRTVRNITA- 190
Query: 663 STEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDFD 770
S +P E + DI L + LI +++LIG D++
Sbjct: 191 SNKPLELMEIEDILKPLDISIDDLIDMAILIGTDYN 226
>sp|P28715|ERCC5_HUMAN DNA repair protein complementing XP-G cells OS=Homo
sapiens GN=ERCC5 PE=1 SV=3
Length = 1186
Score = 62 bits (150), Expect = 3e-009
Identities = 39/93 (41%), Positives = 52/93 (55%), Gaps = 1/93 (1%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
E ELL+L GIP ++A EAEA CA L+ IT DSD +LFGA V ++ N
Sbjct: 771 ESQELLRLFGIPYIQAPMEAEAQCAILDLTDQTSGTITDDSDIWLFGARHVYRNFF-NKN 829
Query: 669 EPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ E Y D LGL R LI ++ L+G+D+
Sbjct: 830 KFVEYYQYVDFHNQLGLDRNKLINLAYLLGSDY 862
>sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN=fen1-b PE=1
SV=1
Length = 382
Score = 60 bits (145), Expect = 1e-008
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 2/95 (2%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNST 668
EC +LL L+GIP + A EAEA CA L G V A T D DA FG +++ + +
Sbjct: 140 ECKKLLSLMGIPYVDAPCEAEATCAALVKAGKVYAAATEDMDALTFGTPVLLRHLTASEA 199
Query: 669 E--PFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
+ P + +H++ + +G+ + + +L+G+D+
Sbjct: 200 KKLPIQEFHLNRVFQDIGINHEQFVDLCILLGSDY 234
>sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp. japonica
GN=FEN-1b PE=2 SV=1
Length = 412
Score = 54 bits (127), Expect = 1e-006
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 2/95 (2%)
Frame = +3
Query: 489 ECVELLKLLGIPVLKANGEAEALCAQLNSHGFVDACITPDSDAFLFGAFSVIKSIKPNS- 665
+C LL L+G+PV++A GEAEA CA L + V A + D D+ FGA ++ + S
Sbjct: 141 DCKRLLSLMGVPVVQAPGEAEAQCAALCENHKVFAIASEDMDSLTFGARRFLRHLTDLSF 200
Query: 666 -TEPFECYHMSDIEAGLGLKRRHLIAISLLIGNDF 767
P + +S + LGL I + +L G D+
Sbjct: 201 KRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDY 235
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,056,207,302
Number of Sequences: 518415
Number of Extensions: 224056207302
Number of Successful Extensions: 1407786191
Number of sequences better than 0.0: 0
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