BLASTX 7.6.2
Query= UN65106 /QuerySize=769
(768 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23... 389 2e-108
TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosyst... 315 2e-086
TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSB... 254 6e-068
>TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23 | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2047940-2049186
FORWARD
Length = 264
Score = 389 bits (997), Expect = 2e-108
Identities = 199/242 (82%), Positives = 215/242 (88%), Gaps = 7/242 (2%)
Frame = +2
Query: 50 MAYSACFLHQSALVSSAARSSSPNSSQRHLSLSRPVQIVRKAQQHHEEDNSAVSRRLAPT 229
MAYSACFLHQSAL SSAARSSS +SSQRH+SLS+PVQI+ KAQQ HE+DNSAVSRRLA T
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALT 60
Query: 230 LLIGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAYSGDGFIVQVPAKWNPSREVEYP 409
LL+GAAAVGSKVSPADAAYGEAANVFGKPKTNTDF Y+GDGF VQVPAKWNPS+E+EYP
Sbjct: 61 LLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYP 120
Query: 410 GQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 589
GQVLR+EDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF
Sbjct: 121 GQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 180
Query: 590 DNNAVATANILDTNIQDVGGKSYYYLSVLTEQQMETKW*ASADH----SHVNGGKLYICK 757
DNNAVATANIL+++ Q+VGGK YYYLSVLT + H + VNGGKLYICK
Sbjct: 181 DNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDE---GGKHQLITATVNGGKLYICK 237
Query: 758 AQ 763
AQ
Sbjct: 238 AQ 239
>TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosystem II subunit
P-2); calcium ion binding | chr2:13119047-13120090 REVERSE
Length = 262
Score = 315 bits (806), Expect = 2e-086
Identities = 167/247 (67%), Positives = 192/247 (77%), Gaps = 19/247 (7%)
Frame = +2
Query: 50 MAYSACFLHQSALVSSAARSSSPNSSQ-RHLSLSRPVQIVRKAQQHHEEDNSAVSRRLAP 226
MAYS FLHQSAL SSA RSSS +SS RH+SLSRPV +V +AQQ E +NSAV RRLA
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 227 TLLIGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFTAYSGDGFIVQVPAKWNPSREVEY 406
TLL+GAAA+GSKVSPA + PK NTDF Y+G+GF +Q+P+KWNPS+E+EY
Sbjct: 61 TLLVGAAAIGSKVSPAPPM---VKPLMCLPKKNTDFLPYTGEGFKIQIPSKWNPSKEIEY 117
Query: 407 PGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGG 586
PGQVLR+EDNFDATSN++VM+TPTDKKSITDYGSPE+FLSQVNYLLGKQAY GETASEGG
Sbjct: 118 PGQVLRFEDNFDATSNVSVMITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGG 177
Query: 587 FDNNAVATANILDTNIQDVGGKSYYYLSVLTEQQMETKW*ASADH--------SHVNGGK 742
FD NAVATANIL+T+ Q++GGK YYYLSVLT A D + VNGGK
Sbjct: 178 FDANAVATANILETSTQEIGGKEYYYLSVLTRT-------ADGDEGGKHQLITATVNGGK 230
Query: 743 LYICKAQ 763
LYICKAQ
Sbjct: 231 LYICKAQ 237
>TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2048076-2049186
FORWARD
Length = 220
Score = 254 bits (647), Expect = 6e-068
Identities = 127/159 (79%), Positives = 137/159 (86%), Gaps = 7/159 (4%)
Frame = +2
Query: 299 NVFGKPKTNTDFTAYSGDGFIVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPT 478
NVFGKPKTNTDF Y+GDGF VQVPAKWNPS+E+EYPGQVLR+EDNFDATSNLNVMVTPT
Sbjct: 40 NVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPT 99
Query: 479 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILDTNIQDVGGKSY 658
DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANIL+++ Q+VGGK Y
Sbjct: 100 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPY 159
Query: 659 YYLSVLTEQQMETKW*ASADH----SHVNGGKLYICKAQ 763
YYLSVLT + H + VNGGKLYICKAQ
Sbjct: 160 YYLSVLTRTADGDE---GGKHQLITATVNGGKLYICKAQ 195
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,191,143,102
Number of Sequences: 33410
Number of Extensions: 29191143102
Number of Successful Extensions: 969545274
Number of sequences better than 0.0: 0
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