BLASTX 7.6.2
Query= UN65113 /QuerySize=724
(723 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G19360.1 | Symbols: | LOCATED IN: endoplasmic... 322 1e-088
TAIR9_protein||AT1G75110.1 | Symbols: RRA2 | RRA2 (REDUCED RESID... 280 6e-076
TAIR9_protein||AT1G75120.1 | Symbols: RRA1 | RRA1 (REDUCED RESID... 214 7e-056
>TAIR9_protein||AT1G19360.1 | Symbols: | LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST
Arabidopsis thaliana protein match is: RRA2 (REDUCED RESIDUAL ARABINOSE
2) (TAIR:AT1G75110.1); Has 165 Blast hits to 162 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
152; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). |
chr1:6690672-6692211 REVERSE
Length = 429
Score = 322 bits (825), Expect = 1e-088
Identities = 167/199 (83%), Positives = 182/199 (91%), Gaps = 5/199 (2%)
Frame = +3
Query: 99 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSLTVNERL-----QVGS 263
MAGRRDR+QQLRGSRIAIAILIGI IGCVCAVLFP GFFNSSSSL +E L QVGS
Sbjct: 1 MAGRRDRSQQLRGSRIAIAILIGIFIGCVCAVLFPYGFFNSSSSLKASEHLSKSSNQVGS 60
Query: 264 SSCESPARIKMLKSDFASLSEKNADLKKQVRELTEKLRLAEQGSDNARKQFLSLGPKIKP 443
S+CESP R+KMLKSDF +LSEKNA+LKKQVRELTEKLRLAEQGSDNARKQ L+LG +IK
Sbjct: 61 SACESPERVKMLKSDFVTLSEKNAELKKQVRELTEKLRLAEQGSDNARKQVLALGTQIKA 120
Query: 444 GPFGTVKSLRTDPTILPDESVNPRLAKILDDIAVDKEVIVALVNSNVKAMLEVQIASVKR 623
GPFGTVKSLRT+PTILPDES+NPRLAKIL++IAVDKEVIVAL N+NVKAMLEVQIAS+KR
Sbjct: 121 GPFGTVKSLRTNPTILPDESINPRLAKILEEIAVDKEVIVALANANVKAMLEVQIASIKR 180
Query: 624 LGITNYLVVALDDYIENFC 680
+GITNYLVVALDDYIEN C
Sbjct: 181 VGITNYLVVALDDYIENLC 199
>TAIR9_protein||AT1G75110.1 | Symbols: RRA2 | RRA2 (REDUCED RESIDUAL ARABINOSE
2) | chr1:28194348-28195885 REVERSE
Length = 429
Score = 280 bits (716), Expect = 6e-076
Identities = 143/200 (71%), Positives = 169/200 (84%), Gaps = 6/200 (3%)
Frame = +3
Query: 99 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSLTVNER------LQVG 260
MAGRRDR QQLRGSRIAIAI +GI+IGCVC+VLFPNGFFNS SSL NE G
Sbjct: 1 MAGRRDRIQQLRGSRIAIAIFVGILIGCVCSVLFPNGFFNSGSSLIANEERISKSTSTDG 60
Query: 261 SSSCESPARIKMLKSDFASLSEKNADLKKQVRELTEKLRLAEQGSDNARKQFLSLGPKIK 440
+SCES R+KMLKSDF+ +S KNA+L+KQVRELTEK+RLAEQ ++NARKQ L LG +IK
Sbjct: 61 LASCESSERVKMLKSDFSIISVKNAELRKQVRELTEKVRLAEQETENARKQVLVLGSEIK 120
Query: 441 PGPFGTVKSLRTDPTILPDESVNPRLAKILDDIAVDKEVIVALVNSNVKAMLEVQIASVK 620
GPFGTVKSLRT+PT++PDESVNPRLAK+L+ +AV+KE+IV L NSNVK MLE+QIASVK
Sbjct: 121 AGPFGTVKSLRTNPTVVPDESVNPRLAKLLEKVAVNKEIIVVLANSNVKPMLELQIASVK 180
Query: 621 RLGITNYLVVALDDYIENFC 680
R+GI NYL+VALDD +E+FC
Sbjct: 181 RVGIQNYLIVALDDSMESFC 200
>TAIR9_protein||AT1G75120.1 | Symbols: RRA1 | RRA1 (REDUCED RESIDUAL ARABINOSE
1) | chr1:28197022-28198656 REVERSE
Length = 403
Score = 214 bits (543), Expect = 7e-056
Identities = 112/194 (57%), Positives = 140/194 (72%), Gaps = 19/194 (9%)
Frame = +3
Query: 99 MAGRRDRTQQLRGSRIAIAILIGIIIGCVCAVLFPNGFFNSSSSLTVNERLQVGSSSCES 278
MA R+++ Q R IAIA+L+GI IGCVC +L PN F N SS +V S+SCES
Sbjct: 1 MAVRKEKVQPFRECGIAIAVLVGIFIGCVCTILIPNDFVNFRSS-------KVASASCES 53
Query: 279 PARIKMLKSDFASLSEKNADLKKQVRELTEKLRLAEQGSDNARKQFLSLGPKIKPGPFGT 458
P R+KM K++FA +SEKN +L+KQV +LTEK+RLAEQ IK GPFGT
Sbjct: 54 PERVKMFKAEFAIISEKNGELRKQVSDLTEKVRLAEQKE------------VIKAGPFGT 101
Query: 459 VKSLRTDPTILPDESVNPRLAKILDDIAVDKEVIVALVNSNVKAMLEVQIASVKRLGITN 638
V L+T+PT+ PDES NPRLAK+L+ +AV+KE+IV L N+NVK MLEVQIASVKR+GI N
Sbjct: 102 VTGLQTNPTVAPDESANPRLAKLLEKVAVNKEIIVVLANNNVKPMLEVQIASVKRVGIQN 161
Query: 639 YLVVALDDYIENFC 680
YLVV LDD +E+FC
Sbjct: 162 YLVVPLDDSLESFC 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,191,143,102
Number of Sequences: 33410
Number of Extensions: 29191143102
Number of Successful Extensions: 969545274
Number of sequences better than 0.0: 0
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