BLASTX 7.6.2
Query= UN65142 /QuerySize=629
(628 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G14580.1 | Symbols: | pentatricopeptide (PPR)... 298 2e-081
TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)... 57 1e-008
TAIR9_protein||AT3G48810.1 | Symbols: | pentatricopeptide (PPR)... 56 2e-008
>TAIR9_protein||AT3G14580.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:4903012-4904229 FORWARD
Length = 406
Score = 298 bits (762), Expect = 2e-081
Identities = 154/210 (73%), Positives = 175/210 (83%), Gaps = 7/210 (3%)
Frame = +3
Query: 9 MILRRLVLSATTSNSNLRRRSKPFSTSPIRLLSSSSS----SSSSSPEPSQQLARLTHKD 176
MILRRLVLSA TSNSN RRS+ S+S +R+LSSSSS SSS +LARL HKD
Sbjct: 1 MILRRLVLSA-TSNSN-PRRSQSLSSSGVRILSSSSSDRYTSSSQRYSGDDRLARLRHKD 58
Query: 177 WLAPNEVLKIFENIKDPTSLIPAYTHYSKRKDYQPTEPLYSLLITKLGHAKMFDEIERLT 356
WLAPNEVLKIF+N+KDP+ L+PAY HYSKRKDYQPTE LY+L+I K G AKM+DEIE +
Sbjct: 59 WLAPNEVLKIFDNVKDPSFLLPAYQHYSKRKDYQPTESLYALMINKFGQAKMYDEIEEVM 118
Query: 357 KTLTLETKRCRFSEDFFYSLMKVYGNSAGRINKAIETLFSMPEFGCWPSVKSFNFILNLL 536
+T+ LE KRCRFSE+FFY+LM++YGN AGRIN+AIE LF MP+FGCWPS KSFNFILNLL
Sbjct: 119 RTIKLE-KRCRFSEEFFYNLMRIYGNLAGRINRAIEILFGMPDFGCWPSSKSFNFILNLL 177
Query: 537 VKAKLFDEIHKIFVRAPDLGVEIDACCLNI 626
V AKLFDEIHKIFV AP LGVEIDACCLNI
Sbjct: 178 VSAKLFDEIHKIFVSAPKLGVEIDACCLNI 207
>TAIR9_protein||AT3G13150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:4227975-4229630 REVERSE
Length = 552
Score = 57 bits (135), Expect = 1e-008
Identities = 43/134 (32%), Positives = 62/134 (46%), Gaps = 6/134 (4%)
Frame = +3
Query: 228 TSLIPAYTHYSKRKDYQPTEPLYSLLITKLGHAKMFDEIERLTKTLTLETKRCRF-SEDF 404
T + + + + ++ LYS I +L AK F I+ + L + K SEDF
Sbjct: 68 TQKVEKFKRSCESESFRQVHGLYSAFIRRLREAKKFSTID---EVLQYQKKFDDIKSEDF 124
Query: 405 FYSLMKVYGNSAGRINKAIETLFSMPEFGCWPSVKSFNFILNLLVKAKLFDEIHKIFVRA 584
+M +YG S G A + MPE C +VKSFN +L+ V +K DE K F
Sbjct: 125 VIRIMLLYGYS-GMAEHAHKLFDEMPELNCERTVKSFNALLSAYVNSKKLDEAMKTFKEL 183
Query: 585 PD-LGVEIDACCLN 623
P+ LG+ D N
Sbjct: 184 PEKLGITPDLVTYN 197
>TAIR9_protein||AT3G48810.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:18097048-18099027 FORWARD
Length = 660
Score = 56 bits (133), Expect = 2e-008
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Frame = +3
Query: 231 SLIPAYTHYSK----RKDYQPTEPLYSLLITKLGHAKMFDEIERLTKTLTLETKRCRFSE 398
S +P H+ K ++ T + ++I KL D ++ L + + L+ C SE
Sbjct: 54 SCVPLALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHC--SE 111
Query: 399 DFFYSLMKVYGNSAGRINKAIETLFSMPEFGCWPSVKSFNFILNLLVKAKLFDEIHKIF 575
D F S++ VY G +A+E + + EFGC PSVK +N +L+ L+ I+ ++
Sbjct: 112 DLFISVISVY-RQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVY 169
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,191,143,102
Number of Sequences: 33410
Number of Extensions: 29191143102
Number of Successful Extensions: 969545274
Number of sequences better than 0.0: 0
|