BLASTX 7.6.2
Query= UN65173 /QuerySize=723
(722 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G24800.1 | Symbols: PRT1 | PRT1 (PROTEOLYSIS 1... 225 4e-059
TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type... 54 9e-008
TAIR9_protein||AT1G04020.2 | Symbols: ATBARD1, BARD1 | BARD1 (BR... 48 5e-006
TAIR9_protein||AT1G04020.1 | Symbols: ATBARD1, BARD1 | BARD1 (BR... 48 5e-006
TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type... 47 8e-006
>TAIR9_protein||AT3G24800.1 | Symbols: PRT1 | PRT1 (PROTEOLYSIS 1);
ubiquitin-protein ligase | chr3:9055653-9057795 FORWARD
Length = 411
Score = 225 bits (571), Expect = 4e-059
Identities = 110/157 (70%), Positives = 123/157 (78%), Gaps = 5/157 (3%)
Frame = +2
Query: 110 MEDVTMKNAE-LHEEISDKFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNELRESHCPI 286
M+D+TMKN E EEI D+FLCCVCLELLYKPIVLSCGHLSCFWCVHKSMN RESHCPI
Sbjct: 5 MKDITMKNDESQEEEIPDQFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNGFRESHCPI 64
Query: 287 CRDPYVHFPAVCQKLHFLLKKIYPLAHHKREEQVLKEEQELECFSPQIDEPKP----KQE 454
CRDPYVHFP+VCQKL+FLLKK+YPLAH KREEQVLKEEQE ECFSPQID +
Sbjct: 65 CRDPYVHFPSVCQKLYFLLKKMYPLAHKKREEQVLKEEQERECFSPQIDLVLDLSVCSGD 124
Query: 455 SVSSGDEQKVEECSNNAGSLLSSEEPKDAKALDENNK 565
S++ D+QKVEECSN A L SS D + +N +
Sbjct: 125 SLNVSDKQKVEECSNAANLLSSSSSRGDIPCIPKNQE 161
Score = 84 bits (207), Expect = 6e-017
Identities = 37/44 (84%), Positives = 42/44 (95%)
Frame = +2
Query: 560 NKQISKDDLLCLACKELLVRPVVLNCGHVYCEGCVVDMFQEAKR 691
+KQISKDDLLC ACKELLVRPVVLNCGHVYCEGCVVDM +E+++
Sbjct: 182 SKQISKDDLLCSACKELLVRPVVLNCGHVYCEGCVVDMAEESEK 225
>TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:28159837-28160250 REVERSE
Length = 138
Score = 54 bits (128), Expect = 9e-008
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Frame = +2
Query: 122 TMKNAELHEEISDKFLCCVCLELLYKPIVLSCGHLSCFWCVHKSMN-ELRESHCPICR 292
T+ N E ++ S+ F C +CLEL +PIV CGHL C+ C++K ++ + +HCP+C+
Sbjct: 5 TITNEE--DDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLHYHSKSNHCPVCK 60
>TAIR9_protein||AT1G04020.2 | Symbols: ATBARD1, BARD1 | BARD1 (BREAST CANCER
ASSOCIATED RING 1); DNA binding / transcription coactivator |
chr1:1036610-1040045 FORWARD
Length = 714
Score = 48 bits (113), Expect = 5e-006
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 170 CCVCLELLYKPIVLSCGHLSCFWCVHKSMNELRESHCPICRDPY 301
C +CL+LL +P++L C H+ C CVHKS ES CP+C+ +
Sbjct: 25 CPLCLKLLNRPVLLPCDHVFCDSCVHKSSQV--ESGCPVCKSKH 66
>TAIR9_protein||AT1G04020.1 | Symbols: ATBARD1, BARD1 | BARD1 (BREAST CANCER
ASSOCIATED RING 1); DNA binding / transcription coactivator |
chr1:1036610-1040045 FORWARD
Length = 715
Score = 48 bits (113), Expect = 5e-006
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +2
Query: 170 CCVCLELLYKPIVLSCGHLSCFWCVHKSMNELRESHCPICRDPY 301
C +CL+LL +P++L C H+ C CVHKS ES CP+C+ +
Sbjct: 25 CPLCLKLLNRPVLLPCDHVFCDSCVHKSSQV--ESGCPVCKSKH 66
>TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:17539069-17540346 REVERSE
Length = 426
Score = 47 bits (111), Expect = 8e-006
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Frame = +2
Query: 113 EDVTMKNAELHEEISDK---FLCCVCLELLYKPIVLSCGHLSCFWCVHKSMNELRESHCP 283
++VT + ++ + + F C +CL+L P+V +CGHL C+ C+++ + CP
Sbjct: 119 DNVTEEKRDVEKSVGSDGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKECP 178
Query: 284 ICR 292
+C+
Sbjct: 179 VCK 181
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,191,143,102
Number of Sequences: 33410
Number of Extensions: 29191143102
Number of Successful Extensions: 969545274
Number of sequences better than 0.0: 0
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