BLASTX 7.6.2
Query= UN65271 /QuerySize=704
(703 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (S... 324 4e-089
TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 262 2e-070
TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 262 2e-070
TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE HYDROX... 262 2e-070
TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 174 4e-044
TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE HYDROX... 174 4e-044
TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine hydrox... 168 4e-042
TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36... 168 5e-042
TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine hydrox... 148 4e-036
TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine hydrox... 137 1e-032
>TAIR9_protein||AT4G37930.1 | Symbols: SHM1, STM, SHMT1 | SHM1 (SERINE
TRANSHYDROXYMETHYLTRANSFERASE 1); glycine hydroxymethyltransferase/
poly(U) binding | chr4:17831891-17834742 REVERSE
Length = 518
Score = 324 bits (829), Expect = 4e-089
Identities = 159/165 (96%), Positives = 163/165 (98%)
Frame = +1
Query: 28 MAMAMALRRLSSSVDKPIRPLIRSTSCFMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 207
MAMAMALRRLSSS+DKPIRPLIRSTSC+MSSLPSEAVD+KERSRVTWPKQLNA LEEVDP
Sbjct: 1 MAMAMALRRLSSSIDKPIRPLIRSTSCYMSSLPSEAVDEKERSRVTWPKQLNAPLEEVDP 60
Query: 208 EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 387
EIADIIE EKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 388 AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPH+
Sbjct: 121 AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHE 165
Score = 70 bits (171), Expect = 9e-013
Identities = 32/35 (91%), Positives = 34/35 (97%)
Frame = +2
Query: 518 MIFYRKGVKEVNKQGKEVLYDFEDKINQAVLPGLQ 622
MIF+RKGVKE+NKQGKEVLYDFEDKINQAV PGLQ
Sbjct: 295 MIFFRKGVKEINKQGKEVLYDFEDKINQAVFPGLQ 329
>TAIR9_protein||AT5G26780.1 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 518
Score = 262 bits (668), Expect = 2e-070
Identities = 132/165 (80%), Positives = 145/165 (87%), Gaps = 2/165 (1%)
Frame = +1
Query: 34 MAMALRRLSSSVDKPIRPLIRSTSC--FMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 207
MA+ALRRLSSSV KPI L + FMSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 208 EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 387
E+ADIIELEKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 388 AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
AETLCQKRALEAF+LDP KWGVNVQ LSGSPANF VYTALLKPH+
Sbjct: 121 AETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHE 165
Score = 66 bits (160), Expect = 2e-011
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +2
Query: 518 MIFYRKGVKEVNKQGKEVLYDFEDKINQAVLPGLQ 622
MIF+RKG+KE+NKQGKEV+YD+ED+INQAV PGLQ
Sbjct: 295 MIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQ 329
>TAIR9_protein||AT5G26780.3 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 262 bits (668), Expect = 2e-070
Identities = 132/165 (80%), Positives = 145/165 (87%), Gaps = 2/165 (1%)
Frame = +1
Query: 34 MAMALRRLSSSVDKPIRPLIRSTSC--FMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 207
MA+ALRRLSSSV KPI L + FMSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 208 EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 387
E+ADIIELEKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 388 AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
AETLCQKRALEAF+LDP KWGVNVQ LSGSPANF VYTALLKPH+
Sbjct: 121 AETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHE 165
Score = 66 bits (160), Expect = 2e-011
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +2
Query: 518 MIFYRKGVKEVNKQGKEVLYDFEDKINQAVLPGLQ 622
MIF+RKG+KE+NKQGKEV+YD+ED+INQAV PGLQ
Sbjct: 295 MIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQ 329
>TAIR9_protein||AT5G26780.2 | Symbols: SHM2 | SHM2 (SERINE
HYDROXYMETHYLTRANSFERASE 2); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr5:9418299-9421725 FORWARD
Length = 534
Score = 262 bits (668), Expect = 2e-070
Identities = 132/165 (80%), Positives = 145/165 (87%), Gaps = 2/165 (1%)
Frame = +1
Query: 34 MAMALRRLSSSVDKPIRPLIRSTSC--FMSSLPSEAVDDKERSRVTWPKQLNASLEEVDP 207
MA+ALRRLSSSV KPI L + FMSSL + A+ + E+SR +W KQLNASL+E+DP
Sbjct: 1 MALALRRLSSSVKKPISLLSSNGGSLRFMSSLSTAAMAESEKSRSSWIKQLNASLDEIDP 60
Query: 208 EIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 387
E+ADIIELEKARQWKG ELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM
Sbjct: 61 EVADIIELEKARQWKGFELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDM 120
Query: 388 AETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
AETLCQKRALEAF+LDP KWGVNVQ LSGSPANF VYTALLKPH+
Sbjct: 121 AETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPHE 165
Score = 66 bits (160), Expect = 2e-011
Identities = 28/35 (80%), Positives = 34/35 (97%)
Frame = +2
Query: 518 MIFYRKGVKEVNKQGKEVLYDFEDKINQAVLPGLQ 622
MIF+RKG+KE+NKQGKEV+YD+ED+INQAV PGLQ
Sbjct: 295 MIFFRKGLKEINKQGKEVMYDYEDRINQAVFPGLQ 329
>TAIR9_protein||AT4G32520.1 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 174 bits (441), Expect = 4e-044
Identities = 94/164 (57%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
Frame = +1
Query: 49 RRLSSSVDKPIRP------LIRSTSCFMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPE 210
++L ++ KP R L+ SLP+ + KE + L EVDPE
Sbjct: 36 QQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSKEIPFEDY------GLGEVDPE 89
Query: 211 IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 390
+ II EK RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID
Sbjct: 90 VRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDQL 149
Query: 391 ETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
ETLCQ RAL AFRLD KWGVNVQPLSGSPANF VYTA+L PHD
Sbjct: 150 ETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHD 193
>TAIR9_protein||AT4G32520.2 | Symbols: SHM3 | SHM3 (SERINE
HYDROXYMETHYLTRANSFERASE 3); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:15689642-15692334 REVERSE
Length = 530
Score = 174 bits (441), Expect = 4e-044
Identities = 94/164 (57%), Positives = 109/164 (66%), Gaps = 12/164 (7%)
Frame = +1
Query: 49 RRLSSSVDKPIRP------LIRSTSCFMSSLPSEAVDDKERSRVTWPKQLNASLEEVDPE 210
++L ++ KP R L+ SLP+ + KE + L EVDPE
Sbjct: 36 QQLKFNISKPFRSSFLKRNLVSEMRASSVSLPNVEISSKEIPFEDY------GLGEVDPE 89
Query: 211 IADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMA 390
+ II EK RQ++ LELI SENFTS +VM+AVGS +TNKYSEG PG RYYGGNEYID
Sbjct: 90 VRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGGNEYIDQL 149
Query: 391 ETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
ETLCQ RAL AFRLD KWGVNVQPLSGSPANF VYTA+L PHD
Sbjct: 150 ETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPHD 193
>TAIR9_protein||AT4G13930.1 | Symbols: SHM4 | SHM4 (serine
hydroxymethyltransferase 4); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr4:8048013-8050021 REVERSE
Length = 472
Score = 168 bits (424), Expect = 4e-042
Identities = 80/114 (70%), Positives = 91/114 (79%)
Frame = +1
Query: 181 NASLEEVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 360
N SL VDPEI D+IE EK RQ +G+ELI SENFTS +V++A+GS +TNKYSEG PG RY
Sbjct: 9 NTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRY 68
Query: 361 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
YGGNE+ID E LC+ RALEAF DP WGVNVQP SGSPANF YTALL+PHD
Sbjct: 69 YGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPHD 122
>TAIR9_protein||AT4G13890.1 | Symbols: SHM5, EDA36, EDA37 | EDA36 (EMBRYO SAC
DEVELOPMENT ARREST 37); catalytic/ glycine hydroxymethyltransferase/
pyridoxal phosphate binding | chr4:8032146-8033718 REVERSE
Length = 471
Score = 168 bits (423), Expect = 5e-042
Identities = 79/114 (69%), Positives = 94/114 (82%)
Frame = +1
Query: 181 NASLEEVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 360
N L+ VDPEI D+IE EK RQ +G+ELI +ENFTSV+VM+A+GS +TNKYSEG PG RY
Sbjct: 9 NTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRY 68
Query: 361 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPHD 522
YGG E+ID E+LC+ R+LEAF +PEKWGVNVQP SGSPANF YTALL+PHD
Sbjct: 69 YGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPHD 122
>TAIR9_protein||AT1G22020.1 | Symbols: SHM6 | SHM6 (serine
hydroxymethyltransferase 6); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:7754599-7757087 FORWARD
Length = 600
Score = 148 bits (372), Expect = 4e-036
Identities = 72/112 (64%), Positives = 87/112 (77%)
Frame = +1
Query: 181 NASLEEVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARY 360
N S+EE DPEI + +E EK RQ++G+ELI SENF +VM+A+GS +TNKYSEG PGARY
Sbjct: 139 NQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMPGARY 198
Query: 361 YGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKP 516
Y GN+YID E LCQ+RAL AF L+ EKWGVNVQP S + ANF V+T LL P
Sbjct: 199 YTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMP 250
>TAIR9_protein||AT1G36370.1 | Symbols: SHM7 | SHM7 (serine
hydroxymethyltransferase 7); catalytic/ glycine
hydroxymethyltransferase/ pyridoxal phosphate binding |
chr1:13696240-13698576 REVERSE
Length = 599
Score = 137 bits (343), Expect = 1e-032
Identities = 70/134 (52%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Frame = +1
Query: 115 SSLPSEAVDDKERSRVTWPKQLNASLEEVDPEIADIIELEKARQWKGLELIPSENFTSVS 294
SS+ ++ + + W Q + DP+I +++E EK RQ +G+ELI SENF +
Sbjct: 116 SSIGDSDLESRRAAVRAWGDQ---PIHLADPDIHELMEKEKQRQVRGIELIASENFVCRA 172
Query: 295 VMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSG 474
VM+A+GS +TNKYSEG PGARYY GN+YID E LC +RAL AF L+ +KWGVNVQP S
Sbjct: 173 VMEALGSHLTNKYSEGMPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSC 232
Query: 475 SPANFHVYTALLKP 516
+ ANF VYT LL P
Sbjct: 233 TSANFAVYTGLLLP 246
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,233,034,166
Number of Sequences: 33410
Number of Extensions: 29233034166
Number of Successful Extensions: 969562474
Number of sequences better than 0.0: 0
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