Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN65295


BLASTX 7.6.2

Query= UN65295 /QuerySize=750
        (749 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G50840.1 | Symbols: POLGAMMA2 | POLGAMMA2 (pol...    398   3e-111
TAIR9_protein||AT3G20540.1 | Symbols: POLGAMMA1 | POLGAMMA1 (pol...    367   5e-102

>TAIR9_protein||AT1G50840.1 | Symbols: POLGAMMA2 | POLGAMMA2 (polymerase gamma
        2); DNA binding / DNA-directed DNA polymerase | chr1:18839277-18844313
        FORWARD

          Length = 1051

 Score =  398 bits (1021), Expect = 3e-111
 Identities = 204/246 (82%), Positives = 216/246 (87%), Gaps = 12/246 (4%)
 Frame = +1

Query:   1 DFYHDFWRPFCKLLVKMEAEGILVDRDYLAEIEKVAKAEQQVAVSRFRNWASKYCPDAKY 180
           DFYH+FWRPF +LLVKMEAEGILVDR+YLAEIEKVAKAEQQVA SRFRNWASKYCPDAKY
Sbjct: 508 DFYHEFWRPFGELLVKMEAEGILVDREYLAEIEKVAKAEQQVAGSRFRNWASKYCPDAKY 567

Query: 181 MNVGSDAQLRQLFFGGISNSENHEVLPVEKLFKIPNIDKVIEEGKKAPTKFRNIKLHRIS 360
           MN+GSD QLRQLFFGGISNS + EVLPVEKLFK+PNIDKVIEEGKK PTKFRNIKLHRIS
Sbjct: 568 MNIGSDTQLRQLFFGGISNSHD-EVLPVEKLFKVPNIDKVIEEGKKTPTKFRNIKLHRIS 626

Query: 361 DTPISTETYTASGWPSVSGVTLKTLAGKVSAEYDFMEDVTDTSAE---EDDDAAAAAVDQ 531
           D+P+STE +TASGWPSV G  LK LAGKVSAEYDFM+DV+D S E   EDDD       +
Sbjct: 627 DSPLSTENFTASGWPSVGGDVLKELAGKVSAEYDFMDDVSDISLEEVVEDDDV------E 680

Query: 532 ASEAQKSKTD--VDTSAYGTAYAAFGGGERGKEACHAIASLCEVCSIDSLISNFILPLQG 705
            SE QKSKTD   DTSAYGTAY AFGGGERGKEACHAIASLCEVCSIDSLISNFILPLQG
Sbjct: 681 TSETQKSKTDDETDTSAYGTAYVAFGGGERGKEACHAIASLCEVCSIDSLISNFILPLQG 740

Query: 706 SNVSAK 723
           SNVS K
Sbjct: 741 SNVSGK 746

>TAIR9_protein||AT3G20540.1 | Symbols: POLGAMMA1 | POLGAMMA1 (polymerase gamma
        1); 3'-5' exonuclease/ DNA binding / DNA-directed DNA polymerase/
        nucleic acid binding | chr3:7168261-7173357 FORWARD

          Length = 1035

 Score =  367 bits (941), Expect = 5e-102
 Identities = 185/245 (75%), Positives = 206/245 (84%), Gaps = 4/245 (1%)
 Frame = +1

Query:   1 DFYHDFWRPFCKLLVKMEAEGILVDRDYLAEIEKVAKAEQQVAVSRFRNWASKYCPDAKY 180
           DFY ++W+PF +LL KME+EG+LVDRDYLA+IE VAKAEQ++AVSRFRNWASK+CPDAK+
Sbjct: 486 DFYQEYWQPFGELLAKMESEGMLVDRDYLAQIEIVAKAEQEIAVSRFRNWASKHCPDAKH 545

Query: 181 MNVGSDAQLRQLFFGGISNSENHEVLPVEKLFKIPNIDKVIEEGKKAPTKFRNIKLHRIS 360
           MNVGSD QLRQLFFGGISNS N E LP EKLFK+PN+DKVIEEGKK  TKFRNIKLHRIS
Sbjct: 546 MNVGSDTQLRQLFFGGISNSCNDEDLPYEKLFKVPNVDKVIEEGKKRATKFRNIKLHRIS 605

Query: 361 DTPISTETYTASGWPSVSGVTLKTLAGKVSAEYDFMEDVTDTSAEED--DDAAAAAVDQA 534
           D P+ TE +TASGWPSVSG TLK LAGKVSAEYD+ME V DT  EE+  DD   +  D+ 
Sbjct: 606 DRPLPTEKFTASGWPSVSGDTLKALAGKVSAEYDYMEGVLDTCLEENIGDDDCISLPDEV 665

Query: 535 SEAQKSKTDV--DTSAYGTAYAAFGGGERGKEACHAIASLCEVCSIDSLISNFILPLQGS 708
            E Q   T V  DTSAYGTA+ AFGGGE GKEACHAIA+LCEVCSIDSLISNFILPLQGS
Sbjct: 666 VETQHVNTSVESDTSAYGTAFDAFGGGESGKEACHAIAALCEVCSIDSLISNFILPLQGS 725

Query: 709 NVSAK 723
           NVS K
Sbjct: 726 NVSGK 730

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,233,034,166
Number of Sequences: 33410
Number of Extensions: 29233034166
Number of Successful Extensions: 969562474
Number of sequences better than 0.0: 0