BLASTX 7.6.2
Query= UN65344 /QuerySize=601
(600 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 129 2e-030
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 129 2e-030
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 112 3e-025
TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein | chr1:... 112 3e-025
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 129 bits (323), Expect = 2e-030
Identities = 75/101 (74%), Positives = 81/101 (80%), Gaps = 9/101 (8%)
Frame = +2
Query: 113 SAIVCGSKRSLFDDLSSASSSSSPPVSKKLRRFSSSSPPSFS----SSSLLLLHHLAALF 280
SAIVCG KRSLF+DL++A SPPVSKKLR FSSSS FS SS LLL HLAA+F
Sbjct: 2 SAIVCG-KRSLFEDLAAA----SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIF 56
Query: 281 PDMDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEA 403
PDMD QILERAIEECGDDLDSAIR LNQLRLES NK+S+ A
Sbjct: 57 PDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSA 97
Score = 95 bits (235), Expect = 2e-020
Identities = 63/145 (43%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Frame = +2
Query: 158 SSASSSSSPPVSKKLRRFSSSSPPSFSSSSLLLLHH-LAALFPDMDNQIL---ERAIEEC 325
SS+SS SPP+ F +L + D+D+ I + +E
Sbjct: 31 SSSSSRFSPPIPPSSSLLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESA 90
Query: 326 GDDLDSAIRSLNQLRLESTNKDSEEAGGGGSSKKEEVLNLDGNEWVELFVREMMNASDMK 505
+ DSA NQ + + E G + ++ VLNLDG EWVELFVREMMNASDMK
Sbjct: 91 NKNSDSA---TNQSPVVIQEPNVEPQQQGSAKEEPNVLNLDGTEWVELFVREMMNASDMK 147
Query: 506 DAKDRASRALQALEKSINARAGADA 580
DAK RA+RAL+ALEKSINAR G DA
Sbjct: 148 DAKARAARALEALEKSINARTGTDA 172
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 129 bits (323), Expect = 2e-030
Identities = 75/101 (74%), Positives = 81/101 (80%), Gaps = 9/101 (8%)
Frame = +2
Query: 113 SAIVCGSKRSLFDDLSSASSSSSPPVSKKLRRFSSSSPPSFS----SSSLLLLHHLAALF 280
SAIVCG KRSLF+DL++A SPPVSKKLR FSSSS FS SS LLL HLAA+F
Sbjct: 2 SAIVCG-KRSLFEDLAAA----SPPVSKKLRCFSSSSSSRFSPPIPPSSSLLLDHLAAIF 56
Query: 281 PDMDNQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEA 403
PDMD QILERAIEECGDDLDSAIR LNQLRLES NK+S+ A
Sbjct: 57 PDMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSA 97
Score = 95 bits (235), Expect = 2e-020
Identities = 63/145 (43%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Frame = +2
Query: 158 SSASSSSSPPVSKKLRRFSSSSPPSFSSSSLLLLHH-LAALFPDMDNQIL---ERAIEEC 325
SS+SS SPP+ F +L + D+D+ I + +E
Sbjct: 31 SSSSSRFSPPIPPSSSLLLDHLAAIFPDMDKQILERAIEECGDDLDSAIRCLNQLRLESA 90
Query: 326 GDDLDSAIRSLNQLRLESTNKDSEEAGGGGSSKKEEVLNLDGNEWVELFVREMMNASDMK 505
+ DSA NQ + + E G + ++ VLNLDG EWVELFVREMMNASDMK
Sbjct: 91 NKNSDSA---TNQSPVVIQEPNVEPQQQGSAKEEPNVLNLDGTEWVELFVREMMNASDMK 147
Query: 506 DAKDRASRALQALEKSINARAGADA 580
DAK RA+RAL+ALEKSINAR G DA
Sbjct: 148 DAKARAARALEALEKSINARTGTDA 172
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 112 bits (278), Expect = 3e-025
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Frame = +2
Query: 113 SAIVCGSKRSLFDDLSSASSSSSPPVSKKLRRFSSSSPPSFSSSSLLLLHHLAALFPDMD 292
SA+ CG+KRS FDD +SSPP SK+ R FS S+ P +SS L L + FP ++
Sbjct: 2 SAVYCGTKRSYFDD------NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIE 55
Query: 293 NQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEAGGGGSSKKEEVL-----NLDGNE 457
+L +A+E+ G D ++A++SL K E A GG ++++ + + G++
Sbjct: 56 LTVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDD 115
Query: 458 WVELFVREMMNASDMKDAKDRASRALQALEKSINARAGADA 580
WVEL VRE++ +S DAK RA+R L+ALEK ++ARA +A
Sbjct: 116 WVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEA 156
>TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein |
chr1:30110059-30111051 REVERSE
Length = 181
Score = 112 bits (278), Expect = 3e-025
Identities = 64/161 (39%), Positives = 97/161 (60%), Gaps = 11/161 (6%)
Frame = +2
Query: 113 SAIVCGSKRSLFDDLSSASSSSSPPVSKKLRRFSSSSPPSFSSSSLLLLHHLAALFPDMD 292
SA+ CG+KRS FDD +SSPP SK+ R FS S+ P +SS L L + FP ++
Sbjct: 2 SAVYCGTKRSYFDD------NSSPPSSKRFRCFSPSNSPIWSSPPSSSLDQLHSAFPHIE 55
Query: 293 NQILERAIEECGDDLDSAIRSLNQLRLESTNKDSEEAGGGGSSKKEEVL-----NLDGNE 457
+L +A+E+ G D ++A++SL K E A GG ++++ + + G++
Sbjct: 56 LTVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAGGAATQETDAVCGGNPPTSGDD 115
Query: 458 WVELFVREMMNASDMKDAKDRASRALQALEKSINARAGADA 580
WVEL VRE++ +S DAK RA+R L+ALEK ++ARA +A
Sbjct: 116 WVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEA 156
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,233,034,166
Number of Sequences: 33410
Number of Extensions: 29233034166
Number of Successful Extensions: 969562474
Number of sequences better than 0.0: 0
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