BLASTX 7.6.2
Query= UN65466 /QuerySize=296
(295 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G40430.1 | Symbols: | FUNCTIONS IN: molecular... 132 6e-032
TAIR9_protein||AT2G40430.2 | Symbols: | FUNCTIONS IN: molecular... 132 6e-032
>TAIR9_protein||AT2G40430.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor
suppressor protein Gltscr2 (InterPro:IPR011211), P60-like
(InterPro:IPR011687); Has 601 Blast hits to 544 proteins in 148
species: Archae - 0; Bacteria - 22; Metazoa - 201; Fungi - 103; Plants
- 32; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). |
chr2:16879466-16882365 REVERSE
Length = 443
Score = 132 bits (330), Expect = 6e-032
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +1
Query: 67 MGKGSKSSRKGKKAWRANISTENIEDFFDKTTKDALSGGNLSAAPSDDLFRVQKSHDLPV 246
MGK SK+SRKGKKAWRANIS+E+IEDFF+KTT+DALSGGNLSAAPS+DLF V KSHDLPV
Sbjct: 1 MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60
Query: 247 KRKIEKSREKVLRCDS 294
KRKIEK RE+VLR DS
Sbjct: 61 KRKIEKHRERVLRVDS 76
>TAIR9_protein||AT2G40430.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Tumor
suppressor protein Gltscr2 (InterPro:IPR011211), P60-like
(InterPro:IPR011687); Has 608 Blast hits to 551 proteins in 148
species: Archae - 0; Bacteria - 22; Metazoa - 203; Fungi - 106; Plants
- 34; Viruses - 0; Other Eukaryotes - 243 (source: NCBI BLink). |
chr2:16879527-16882365 REVERSE
Length = 450
Score = 132 bits (330), Expect = 6e-032
Identities = 64/76 (84%), Positives = 71/76 (93%)
Frame = +1
Query: 67 MGKGSKSSRKGKKAWRANISTENIEDFFDKTTKDALSGGNLSAAPSDDLFRVQKSHDLPV 246
MGK SK+SRKGKKAWRANIS+E+IEDFF+KTT+DALSGGNLSAAPS+DLF V KSHDLPV
Sbjct: 1 MGKRSKTSRKGKKAWRANISSEDIEDFFEKTTRDALSGGNLSAAPSEDLFHVDKSHDLPV 60
Query: 247 KRKIEKSREKVLRCDS 294
KRKIEK RE+VLR DS
Sbjct: 61 KRKIEKHRERVLRVDS 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,275,363,836
Number of Sequences: 33410
Number of Extensions: 29275363836
Number of Successful Extensions: 969581755
Number of sequences better than 0.0: 0
|
