Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN65976


BLASTX 7.6.2

Query= UN65976 /QuerySize=754
        (753 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9LPC4|PPR1_ARATH Pentatricopeptide repeat-containing protein...    235   2e-061

>sp|Q9LPC4|PPR1_ARATH Pentatricopeptide repeat-containing protein At1g01970
        OS=Arabidopsis thaliana GN=At1g01970 PE=2 SV=1

          Length = 409

 Score =  235 bits (599), Expect = 2e-061
 Identities = 135/237 (56%), Positives = 158/237 (66%), Gaps = 22/237 (9%)
 Frame = +2

Query:  26 MGFYSSNAVLNSAFLC--VSSGSLCFSRRRRRTPFFFVQESSLRFC-CKCTTM-----AV 181
           MG YS +AVL+    C  V +    + R  RR P   V+    R C CKC         V
Sbjct:   1 MGIYSCSAVLSFGLKCPLVIARHRLYHRMFRRNP-LLVESHLNRLCSCKCNASLAIGEVV 59

Query: 182 EKGP-------NWVDLNHHNHHQITEEQEEAISRIPVSMSKRCQALMKQIIICLEEKDSF 340
           EK         NW D+  +    +TEEQ+EAI+RIP+ MSKRCQALM+QII    EK SF
Sbjct:  60 EKEDAEQSRSFNWADVGLN----LTEEQDEAITRIPIKMSKRCQALMRQIICFSPEKGSF 115

Query: 341 CCDDMLAAWARRMRPIRADWLSLLKHLNTLDSPFYIKVAEYALLEDSFGANPRDYTKIIH 520
           C  D+L AW RRM PIRADWLS+LK L  LDSPFYIKVAE++LL+DSF AN RDYTKIIH
Sbjct: 116 C--DLLGAWLRRMNPIRADWLSILKELKNLDSPFYIKVAEFSLLQDSFEANARDYTKIIH 173

Query: 521 YYGKLNQIQDAENTLVAMKNRGFLIDQVTLTAMLQSYSKARYHRLAETLSTMSNCLG 691
           YYGKLNQ++DAE TL++MKNRGFLIDQVTLTAM+Q YSKA  H+LAE        LG
Sbjct: 174 YYGKLNQVEDAERTLLSMKNRGFLIDQVTLTAMVQLYSKAGCHKLAEETFNEIKLLG 230


 Score =  51 bits (120), Expect = 8e-006
 Identities = 25/35 (71%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = +1

Query: 652 LGRDTFNDVKLLGEPLDYRP-TFMIMAYIRAGTPE 753
           L  +TFN++KLLGEPLDYR    MIMAYIRAG PE
Sbjct: 218 LAEETFNEIKLLGEPLDYRSYGSMIMAYIRAGVPE 252

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,056,207,302
Number of Sequences: 518415
Number of Extensions: 224056207302
Number of Successful Extensions: 1407786191
Number of sequences better than 0.0: 0