BLASTX 7.6.2
Query= UN66135 /QuerySize=741
(740 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|2982458|emb|CAA18222.1| putative protein [Arabidopsis thaliana] 166 3e-039
gi|20268733|gb|AAM14070.1| unknown protein [Arabidopsis thaliana] 161 1e-037
gi|334186936|ref|NP_194378.2| RNA-binding KH domain-containing p... 161 1e-037
gi|297799358|ref|XP_002867563.1| KH domain-containing protein [A... 158 1e-036
gi|227204383|dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana] 149 6e-034
gi|15241136|ref|NP_200425.1| RNA-binding KH domain-containing pr... 141 2e-031
gi|297793103|ref|XP_002864436.1| KH domain-containing protein [A... 136 4e-030
gi|255584412|ref|XP_002532938.1| nucleic acid binding protein, p... 106 5e-021
gi|224056887|ref|XP_002299073.1| predicted protein [Populus tric... 90 3e-016
gi|224122252|ref|XP_002330577.1| predicted protein [Populus tric... 88 1e-015
gi|225462037|ref|XP_002274648.1| PREDICTED: similar to Os02g0722... 87 2e-015
gi|225462039|ref|XP_002274674.1| PREDICTED: similar to Os02g0722... 87 2e-015
gi|118483339|gb|ABK93571.1| unknown [Populus trichocarpa] 86 4e-015
gi|224031889|gb|ACN35020.1| unknown [Zea mays] 79 6e-013
gi|242066158|ref|XP_002454368.1| hypothetical protein SORBIDRAFT... 77 2e-012
gi|326516274|dbj|BAJ88160.1| predicted protein [Hordeum vulgare ... 77 2e-012
gi|125540946|gb|EAY87341.1| hypothetical protein OsI_08744 [Oryz... 77 3e-012
gi|195627804|gb|ACG35732.1| nucleic acid binding protein [Zea mays] 72 6e-011
gi|226495617|ref|NP_001141163.1| hypothetical protein LOC1002732... 72 7e-011
gi|19424087|gb|AAL87326.1| putative RNA-binding protein [Arabido... 72 9e-011
>gi|2982458|emb|CAA18222.1| putative protein [Arabidopsis thaliana]
Length = 555
Score = 166 bits (420), Expect = 3e-039
Identities = 86/102 (84%), Positives = 90/102 (88%), Gaps = 5/102 (4%)
Frame = +3
Query: 120 QAAEE*EDV--LMMMMTSLG---MDGGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGL 284
Q AEE E+V +MMMMTSLG GGG GG GGGRF+TYPPPLSVPPSAPQSPNFSGGL
Sbjct: 236 QVAEEEEEVVAVMMMMTSLGGGAGGGGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGL 295
Query: 285 RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLFRLMNQEI 410
RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPH+ RLMNQEI
Sbjct: 296 RSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEI 337
>gi|20268733|gb|AAM14070.1| unknown protein [Arabidopsis thaliana]
Length = 308
Score = 161 bits (406), Expect = 1e-037
Identities = 80/90 (88%), Positives = 82/90 (91%), Gaps = 3/90 (3%)
Frame = +3
Query: 150 MMMMTSLG---MDGGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK 320
MMMMTSLG GGG GG GGGRF+TYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK
Sbjct: 1 MMMMTSLGGGAGGGGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK 60
Query: 321 YLSELLAERHKLTPFLPVLPHLFRLMNQEI 410
YLSELLAERHKLTPFLPVLPH+ RLMNQEI
Sbjct: 61 YLSELLAERHKLTPFLPVLPHVCRLMNQEI 90
>gi|334186936|ref|NP_194378.2| RNA-binding KH domain-containing protein
[Arabidopsis thaliana]
Length = 308
Score = 161 bits (406), Expect = 1e-037
Identities = 80/90 (88%), Positives = 82/90 (91%), Gaps = 3/90 (3%)
Frame = +3
Query: 150 MMMMTSLG---MDGGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK 320
MMMMTSLG GGG GG GGGRF+TYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK
Sbjct: 1 MMMMTSLGGGAGGGGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEK 60
Query: 321 YLSELLAERHKLTPFLPVLPHLFRLMNQEI 410
YLSELLAERHKLTPFLPVLPH+ RLMNQEI
Sbjct: 61 YLSELLAERHKLTPFLPVLPHVCRLMNQEI 90
>gi|297799358|ref|XP_002867563.1| KH domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 565
Score = 158 bits (397), Expect = 1e-036
Identities = 78/89 (87%), Positives = 81/89 (91%), Gaps = 3/89 (3%)
Frame = +3
Query: 144 VLMMMMTSLGMDGGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKY 323
V+MMMMTSL GGG G GGGGRF+ YPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKY
Sbjct: 262 VVMMMMTSL---GGGGGSGGGGRFVPYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKY 318
Query: 324 LSELLAERHKLTPFLPVLPHLFRLMNQEI 410
LSELLAERHKL PFLPVLPH+ RLMNQEI
Sbjct: 319 LSELLAERHKLIPFLPVLPHVCRLMNQEI 347
>gi|227204383|dbj|BAH57043.1| AT5G56140 [Arabidopsis thaliana]
Length = 104
Score = 149 bits (374), Expect = 6e-034
Identities = 77/99 (77%), Positives = 80/99 (80%), Gaps = 7/99 (7%)
Frame = +3
Query: 150 MMMMTSLGMDGGGS-------GGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLV 308
MMMM+SLG GGG GGGGGGRFMTY LSVPPSAPQSPN+SGGLRSQ S V
Sbjct: 1 MMMMSSLGGGGGGGGGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFV 60
Query: 309 EQEKYLSELLAERHKLTPFLPVLPHLFRLMNQEISFIIS 425
EQEKYLSELLAERHKLTPFLPVLPH FRL+NQEI IIS
Sbjct: 61 EQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEICSIIS 99
>gi|15241136|ref|NP_200425.1| RNA-binding KH domain-containing protein
[Arabidopsis thaliana]
Length = 315
Score = 141 bits (353), Expect = 2e-031
Identities = 68/80 (85%), Positives = 70/80 (87%)
Frame = +3
Query: 171 GMDGGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERH 350
G GGG GGGGGGRFMTY LSVPPSAPQSPN+SGGLRSQ S VEQEKYLSELLAERH
Sbjct: 15 GGSGGGIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYLSELLAERH 74
Query: 351 KLTPFLPVLPHLFRLMNQEI 410
KLTPFLPVLPH FRL+NQEI
Sbjct: 75 KLTPFLPVLPHAFRLLNQEI 94
>gi|297793103|ref|XP_002864436.1| KH domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 308
Score = 136 bits (341), Expect = 4e-030
Identities = 68/86 (79%), Positives = 72/86 (83%), Gaps = 4/86 (4%)
Frame = +3
Query: 159 MTSLGMDGGGS----GGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYL 326
M+SLG GGG GGGGGGRFMTY LSVPPSAPQSPN+SGGLRSQ S VEQEKYL
Sbjct: 1 MSSLGGGGGGGGSGVGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQSSVFVEQEKYL 60
Query: 327 SELLAERHKLTPFLPVLPHLFRLMNQ 404
SELLAERHKLTPFLPVLPH +RL+NQ
Sbjct: 61 SELLAERHKLTPFLPVLPHAYRLLNQ 86
>gi|255584412|ref|XP_002532938.1| nucleic acid binding protein, putative
[Ricinus communis]
Length = 300
Score = 106 bits (263), Expect = 5e-021
Identities = 55/77 (71%), Positives = 61/77 (79%), Gaps = 5/77 (6%)
Frame = +3
Query: 180 GGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLT 359
GGG GGGGGRFM Y P PSAP SP+ S GLRS S LVEQEKYLSELLAERHKL+
Sbjct: 6 GGGITGGGGGRFMAYSP----SPSAPHSPHLS-GLRSASSALVEQEKYLSELLAERHKLS 60
Query: 360 PFLPVLPHLFRLMNQEI 410
PF+PVLPH +RL++QEI
Sbjct: 61 PFMPVLPHTYRLLSQEI 77
>gi|224056887|ref|XP_002299073.1| predicted protein [Populus trichocarpa]
Length = 302
Score = 90 bits (221), Expect = 3e-016
Identities = 50/80 (62%), Positives = 58/80 (72%), Gaps = 8/80 (10%)
Frame = +3
Query: 180 GGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRS---QPSFLVEQEKYLSELLAERH 350
GG G G GRFM Y P PSAP SP+ S GLRS + +VEQEKYLSELLAERH
Sbjct: 5 GGVGVGVGAGRFMAYSP----SPSAPHSPHIS-GLRSSAASSALVVEQEKYLSELLAERH 59
Query: 351 KLTPFLPVLPHLFRLMNQEI 410
K++PFLPVLP+ +RL+NQEI
Sbjct: 60 KISPFLPVLPNTYRLLNQEI 79
>gi|224122252|ref|XP_002330577.1| predicted protein [Populus trichocarpa]
Length = 301
Score = 88 bits (217), Expect = 1e-015
Identities = 48/79 (60%), Positives = 57/79 (72%), Gaps = 8/79 (10%)
Frame = +3
Query: 183 GGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRS---QPSFLVEQEKYLSELLAERHK 353
GG G G RFM Y P PSAP SP+ S GLRS + +VEQEKYLSELLAERHK
Sbjct: 5 GGGVGVGASRFMAYSP----SPSAPHSPHIS-GLRSSAASSALVVEQEKYLSELLAERHK 59
Query: 354 LTPFLPVLPHLFRLMNQEI 410
+ PF+PVLP+++RL+NQEI
Sbjct: 60 IIPFMPVLPNIYRLLNQEI 78
>gi|225462037|ref|XP_002274648.1| PREDICTED: similar to Os02g0722700 isoform 1
[Vitis vinifera]
Length = 287
Score = 87 bits (214), Expect = 2e-015
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P +AP SP+ + GLRS S LVEQEKYLSELLAERHKL+PF+PVLPH +
Sbjct: 5 RYMAYSPS---PSTAPHSPHIA-GLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|225462039|ref|XP_002274674.1| PREDICTED: similar to Os02g0722700 isoform 2
[Vitis vinifera]
Length = 248
Score = 87 bits (214), Expect = 2e-015
Identities = 45/67 (67%), Positives = 53/67 (79%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P +AP SP+ + GLRS S LVEQEKYLSELLAERHKL+PF+PVLPH +
Sbjct: 5 RYMAYSPS---PSTAPHSPHIA-GLRSATSALVEQEKYLSELLAERHKLSPFMPVLPHSY 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|118483339|gb|ABK93571.1| unknown [Populus trichocarpa]
Length = 89
Score = 86 bits (212), Expect = 4e-015
Identities = 48/78 (61%), Positives = 56/78 (71%), Gaps = 8/78 (10%)
Frame = +3
Query: 180 GGGSGGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRS---QPSFLVEQEKYLSELLAERH 350
GG G G GRFM Y P PSAP SP+ S GLRS + +VEQEKYLSELLAERH
Sbjct: 5 GGVGVGVGAGRFMAYSP----SPSAPHSPHIS-GLRSSAASSALVVEQEKYLSELLAERH 59
Query: 351 KLTPFLPVLPHLFRLMNQ 404
K++PFLPVLP+ +RL+NQ
Sbjct: 60 KISPFLPVLPNTYRLLNQ 77
>gi|224031889|gb|ACN35020.1| unknown [Zea mays]
Length = 286
Score = 79 bits (193), Expect = 6e-013
Identities = 44/80 (55%), Positives = 54/80 (67%), Gaps = 5/80 (6%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P + P SP GLR+ + + EQEKYLSELLAERHKLTPF+PV+PH
Sbjct: 5 RYMAYSPS---PSTTPHSPRIH-GLRTPSAAVAEQEKYLSELLAERHKLTPFIPVIPHSV 60
Query: 390 RLMNQEISFIISNVWFRLSL 449
RL+NQEI F +S + SL
Sbjct: 61 RLLNQEI-FRVSTLLENASL 79
>gi|242066158|ref|XP_002454368.1| hypothetical protein SORBIDRAFT_04g029520
[Sorghum bicolor]
Length = 286
Score = 77 bits (189), Expect = 2e-012
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P + P SP GGLR+ + + EQEKYL+ELLAERHKL PF+PV+PH
Sbjct: 5 RYMAYSPS---PSTTPHSPRI-GGLRTPSAAVAEQEKYLAELLAERHKLGPFIPVIPHSV 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|326516274|dbj|BAJ88160.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 287
Score = 77 bits (189), Expect = 2e-012
Identities = 39/67 (58%), Positives = 48/67 (71%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P + P SP S GLR+ + + +QEKYL+ELLAERHKL PF+PVLPH
Sbjct: 5 RYMAYSPS---PSTTPHSPRIS-GLRASSAAVADQEKYLAELLAERHKLNPFVPVLPHSI 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|125540946|gb|EAY87341.1| hypothetical protein OsI_08744 [Oryza sativa Indica
Group]
Length = 286
Score = 77 bits (187), Expect = 3e-012
Identities = 38/67 (56%), Positives = 49/67 (73%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P S P +P+ P GLR+ S + +QEKYL+ELLAERHKL+PF+PVLP+
Sbjct: 5 RYMAYSPSPSTTPHSPRIP----GLRAASSAVADQEKYLAELLAERHKLSPFIPVLPNSV 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|195627804|gb|ACG35732.1| nucleic acid binding protein [Zea mays]
Length = 286
Score = 72 bits (176), Expect = 6e-011
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P + P SP + GLR+ + + EQEKYL+ELLAER KL PF+PV+PH
Sbjct: 5 RYMAYSPS---PSTTPHSPRIA-GLRAPSAAMAEQEKYLAELLAERQKLGPFVPVIPHSV 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|226495617|ref|NP_001141163.1| hypothetical protein LOC100273249 [Zea mays]
Length = 286
Score = 72 bits (175), Expect = 7e-011
Identities = 37/67 (55%), Positives = 47/67 (70%), Gaps = 4/67 (5%)
Frame = +3
Query: 210 RFMTYPPPLSVPPSAPQSPNFSGGLRSQPSFLVEQEKYLSELLAERHKLTPFLPVLPHLF 389
R+M Y P P + P SP + GLR+ + + EQEKYL+ELLAER KL PF+PV+PH
Sbjct: 5 RYMAYSPS---PSTTPHSPRIA-GLRAPSAAVAEQEKYLAELLAERQKLGPFVPVIPHSV 60
Query: 390 RLMNQEI 410
RL+NQEI
Sbjct: 61 RLLNQEI 67
>gi|19424087|gb|AAL87326.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 260
Score = 72 bits (174), Expect = 9e-011
Identities = 34/38 (89%), Positives = 35/38 (92%)
Frame = +3
Query: 297 SFLVEQEKYLSELLAERHKLTPFLPVLPHLFRLMNQEI 410
S VEQEKYLSELLAERHKLTPFLPVLPH FRL+NQEI
Sbjct: 2 SVFVEQEKYLSELLAERHKLTPFLPVLPHAFRLLNQEI 39
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 254,426,631,062
Number of Sequences: 15229318
Number of Extensions: 254426631062
Number of Successful Extensions: 74051569
Number of sequences better than 0.0: 0
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