BLASTX 7.6.2
Query= UN66240 /QuerySize=733
(732 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associa... 58 7e-008
sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associa... 58 7e-008
sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associate... 57 1e-007
sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synapto... 57 1e-007
sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associa... 56 2e-007
sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associa... 56 2e-007
sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associa... 54 9e-007
sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associate... 53 2e-006
sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associa... 52 3e-006
sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associa... 52 3e-006
sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associa... 52 3e-006
sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associate... 52 3e-006
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A
OS=Homo sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 58 bits (138), Expect = 7e-008
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +2
Query: 68 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 247
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 248 TGVVLPRSSSEVLGLFLSY*EIANSKS 328
+G++ P S+ V + + N KS
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNEKS 91
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A
OS=Pongo abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 58 bits (138), Expect = 7e-008
Identities = 31/87 (35%), Positives = 48/87 (55%)
Frame = +2
Query: 68 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 247
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 248 TGVVLPRSSSEVLGLFLSY*EIANSKS 328
+G++ P S+ V + + N KS
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNEKS 91
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A
OS=Rattus norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 57 bits (135), Expect = 1e-007
Identities = 32/87 (36%), Positives = 47/87 (54%)
Frame = +2
Query: 68 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 247
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 248 TGVVLPRSSSEVLGLFLSY*EIANSKS 328
+GV+ P S V + + N KS
Sbjct: 65 SGVIDPGSIVTVSVMLQPFDYDPNEKS 91
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding
protein OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 57 bits (135), Expect = 1e-007
Identities = 25/55 (45%), Positives = 37/55 (67%)
Frame = +2
Query: 119 DLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEV 283
+L+F ++ L L+N TD + FKVKTT PK+YCVRPN+G++ P++S V
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAV 69
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A
OS=Mus musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 56 bits (134), Expect = 2e-007
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +2
Query: 68 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 247
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 248 TGVVLPRSSSEVLGLFLSY*EIANSKS 328
+G++ P S V + + N KS
Sbjct: 65 SGIIDPGSIVTVSVMLQPFDYDPNEKS 91
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A
OS=Bos taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 56 bits (133), Expect = 2e-007
Identities = 26/66 (39%), Positives = 40/66 (60%)
Frame = +2
Query: 68 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 247
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGTMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 248 TGVVLP 265
+G++ P
Sbjct: 65 SGIIDP 70
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein
SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3
Length = 244
Score = 54 bits (128), Expect = 9e-007
Identities = 28/66 (42%), Positives = 40/66 (60%)
Frame = +2
Query: 101 LDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSE 280
++I P L + L +Q + ++N +D +AFKVKTT PK YCVRPN VV P + +
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 281 VLGLFL 298
V +FL
Sbjct: 64 VQVIFL 69
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B
OS=Rattus norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 53 bits (125), Expect = 2e-006
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 98 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 274
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGAS 66
Query: 275 SEVLGLFLSY*EIANSKS 328
V + + N KS
Sbjct: 67 LNVSVMLQPFDYDPNEKS 84
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B
OS=Bos taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 52 bits (124), Expect = 3e-006
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 98 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 274
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 275 SEVLGLFLSY*EIANSKS 328
V + + N KS
Sbjct: 67 INVSVMLQPFDYDPNEKS 84
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 52 bits (124), Expect = 3e-006
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 98 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 274
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 275 SEVLGLFLSY*EIANSKS 328
V + + N KS
Sbjct: 67 INVSVMLQPFDYDPNEKS 84
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B
OS=Mus musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 52 bits (124), Expect = 3e-006
Identities = 30/78 (38%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 98 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 274
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGAS 66
Query: 275 SEVLGLFLSY*EIANSKS 328
V + + N KS
Sbjct: 67 LNVSVMLQPFDYDPNEKS 84
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B
OS=Sus scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 52 bits (124), Expect = 3e-006
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 98 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 274
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 275 SEVLGLFLSY*EIANSKS 328
V + + N KS
Sbjct: 67 INVSVMLQPFDYDPNEKS 84
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 224,586,243,839
Number of Sequences: 518415
Number of Extensions: 224586243839
Number of Successful Extensions: 1413644693
Number of sequences better than 0.0: 0
|
