BLASTX 7.6.2
Query= UN66276 /QuerySize=574
(573 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton mo... 256 8e-069
TAIR9_protein||AT5G28750.1 | Symbols: | thylakoid assembly prot... 54 8e-008
>TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton motive force
dependent protein transmembrane transporter | chr5:21286896-21288613
FORWARD
Length = 261
Score = 256 bits (653), Expect = 8e-069
Identities = 149/188 (79%), Positives = 155/188 (82%), Gaps = 16/188 (8%)
Frame = +2
Query: 41 MAMASQIIA--SSSPTITNRSHLL------ASYKTSKPYLSS--CLGSSSRFSPYIGLKH 190
MAMA QIIA SSSPTIT +SHL + YK SKP LSS L SSRFSPYIGLKH
Sbjct: 1 MAMALQIIASSSSSPTIT-KSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKH 59
Query: 191 MGISISPKYSNPEKKKRRCGKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 370
+GISISPK SNPE KKRRC K M+IRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR L
Sbjct: 60 LGISISPKSSNPE-KKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 117
Query: 371 GKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTPNVYNQNRMN---TPPPPPPTPVP 541
GKTLRTFQPTIRELQDVSRDFKSTLEREIGLD+ISTPNVYNQNR N PPPPPP VP
Sbjct: 118 GKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPPSVP 177
Query: 542 SAEDPLTA 565
S E P+TA
Sbjct: 178 STEAPVTA 185
>TAIR9_protein||AT5G28750.1 | Symbols: | thylakoid assembly protein, putative |
chr5:10784142-10785677 REVERSE
Length = 148
Score = 54 bits (127), Expect = 8e-008
Identities = 23/48 (47%), Positives = 35/48 (72%)
Frame = +2
Query: 272 SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQ 415
+LFG+G PE VI VA L+FGPK L E+ +++GKT+++FQ +E +
Sbjct: 62 ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFE 109
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,591,228,181
Number of Sequences: 33410
Number of Extensions: 29591228181
Number of Successful Extensions: 985233781
Number of sequences better than 0.0: 0
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