Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN66276


BLASTX 7.6.2

Query= UN66276 /QuerySize=574
        (573 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton mo...    256   8e-069
TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly prot...     54   8e-008

>TAIR9_protein||AT5G52440.1 | Symbols: HCF106 | HCF106; proton motive force
        dependent protein transmembrane transporter | chr5:21286896-21288613
        FORWARD

          Length = 261

 Score =  256 bits (653), Expect = 8e-069
 Identities = 149/188 (79%), Positives = 155/188 (82%), Gaps = 16/188 (8%)
 Frame = +2

Query:  41 MAMASQIIA--SSSPTITNRSHLL------ASYKTSKPYLSS--CLGSSSRFSPYIGLKH 190
           MAMA QIIA  SSSPTIT +SHL       + YK SKP LSS   L  SSRFSPYIGLKH
Sbjct:   1 MAMALQIIASSSSSPTIT-KSHLFSYPPLQSRYKASKPNLSSWFSLLGSSRFSPYIGLKH 59

Query: 191 MGISISPKYSNPEKKKRRCGKGMVIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARTL 370
           +GISISPK SNPE KKRRC K M+IRASLFGVGAPEALVIGVVALLVFGPKGLAEVAR L
Sbjct:  60 LGISISPKSSNPE-KKRRC-KSMMIRASLFGVGAPEALVIGVVALLVFGPKGLAEVARNL 117

Query: 371 GKTLRTFQPTIRELQDVSRDFKSTLEREIGLDEISTPNVYNQNRMN---TPPPPPPTPVP 541
           GKTLRTFQPTIRELQDVSRDFKSTLEREIGLD+ISTPNVYNQNR N    PPPPPP  VP
Sbjct: 118 GKTLRTFQPTIRELQDVSRDFKSTLEREIGLDDISTPNVYNQNRTNPVQPPPPPPPPSVP 177

Query: 542 SAEDPLTA 565
           S E P+TA
Sbjct: 178 STEAPVTA 185

>TAIR9_protein||AT5G28750.1 | Symbols:  | thylakoid assembly protein, putative |
        chr5:10784142-10785677 REVERSE

          Length = 148

 Score =  54 bits (127), Expect = 8e-008
 Identities = 23/48 (47%), Positives = 35/48 (72%)
 Frame = +2

Query: 272 SLFGVGAPEALVIGVVALLVFGPKGLAEVARTLGKTLRTFQPTIRELQ 415
           +LFG+G PE  VI  VA L+FGPK L E+ +++GKT+++FQ   +E +
Sbjct:  62 ALFGLGVPELAVIAGVAALLFGPKKLPEIGKSIGKTVKSFQQAAKEFE 109

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,591,228,181
Number of Sequences: 33410
Number of Extensions: 29591228181
Number of Successful Extensions: 985233781
Number of sequences better than 0.0: 0