BLASTX 7.6.2
Query= UN66284 /QuerySize=661
(660 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G05270.1 | Symbols: | TraB family protein | c... 291 4e-079
TAIR9_protein||AT2G32340.1 | Symbols: | FUNCTIONS IN: molecular... 170 7e-043
>TAIR9_protein||AT1G05270.1 | Symbols: | TraB family protein |
chr1:1531806-1534305 REVERSE
Length = 372
Score = 291 bits (743), Expect = 4e-079
Identities = 151/203 (74%), Positives = 174/203 (85%), Gaps = 5/203 (2%)
Frame = +2
Query: 59 SMEPTQSP-SESEVHSGEDFVHIEEHSKPAGDFTLSDSIVNVEKEDAVEEEEEEEEQKDS 235
++EPTQSP SE EVHSGEDFVHI++ +P GD +LSDSIVNVEK++ + +E EEE + S
Sbjct: 2 TIEPTQSPSSEPEVHSGEDFVHIDD-PRPTGDISLSDSIVNVEKDELL-DEAAEEEFRGS 59
Query: 236 DSVASVGDAAGG-DGGGECSS-SEKVELPEELAKSVVILTCESSGESGTCDVYLIGTAHV 409
DSV S GD G D GGECSS + KVELPEELAKSVVILTCES+ + G+CDVYL+GTAHV
Sbjct: 60 DSVFSGGDGGGADDDGGECSSEATKVELPEELAKSVVILTCESTADGGSCDVYLVGTAHV 119
Query: 410 SKESCREVKEIISFLKPEAVFVELCASRVSILQPQTMKIPTMSDMIESWKQKQNTFGILY 589
SK+SC EV+ IIS LKPE VFVELC+SR+S+L+PQT+KIPTMSDMIESWKQKQNTFGILY
Sbjct: 120 SKQSCLEVEAIISILKPEVVFVELCSSRLSVLKPQTLKIPTMSDMIESWKQKQNTFGILY 179
Query: 590 GWFLAKIASQLEVFPGTEFRVAY 658
GWFLAKIAS LEVFPG EFRVAY
Sbjct: 180 GWFLAKIASHLEVFPGAEFRVAY 202
>TAIR9_protein||AT2G32340.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Pheromone shutdown-related, TraB (InterPro:IPR002816); BEST Arabidopsis
thaliana protein match is: TraB family protein (TAIR:AT1G05270.1); Has
393 Blast hits to 393 proteins in 158 species: Archae - 68; Bacteria -
138; Metazoa - 89; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 61 (source: NCBI BLink). | chr2:13732247-13734361 FORWARD
Length = 361
Score = 170 bits (430), Expect = 7e-043
Identities = 81/127 (63%), Positives = 104/127 (81%), Gaps = 5/127 (3%)
Frame = +2
Query: 293 SSEKVELPEELAKSVVILTCESSGESGTCDVYLIGTAHVSKESCREVKEIISFLKPEAVF 472
++EK+ELPEE AKSV++LTCES+ E G+CDVYL+GTAHVS+ESCREV+ +IS LKP+AVF
Sbjct: 67 TTEKLELPEEFAKSVMVLTCESTAEGGSCDVYLVGTAHVSQESCREVEAVISALKPQAVF 126
Query: 473 VELCASRVSILQPQTMKI-----PTMSDMIESWKQKQNTFGILYGWFLAKIASQLEVFPG 637
+ELC+SR+SIL PQT+K+ PT +MI WK+K N F I+YG+ LAK A +LEVFPG
Sbjct: 127 LELCSSRLSILTPQTVKVCCQEPPTWMEMIYMWKKKHNLFEIVYGYILAKAAKKLEVFPG 186
Query: 638 TEFRVAY 658
EFRV +
Sbjct: 187 AEFRVGF 193
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,591,228,181
Number of Sequences: 33410
Number of Extensions: 29591228181
Number of Successful Extensions: 985233781
Number of sequences better than 0.0: 0
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