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GenBank blast output of UN66639


BLASTX 7.6.2

Query= UN66639 /QuerySize=575
        (574 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|30699215|ref|NP_177820.2| RNA recognition motif-containing pr...    114   9e-024
gi|297842455|ref|XP_002889109.1| RNA recognition motif-containin...    103   2e-020
gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thal...     76   2e-012
gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana taba...     67   2e-009
gi|255645608|gb|ACU23298.1| unknown [Glycine max]                       63   2e-008

>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein
        [Arabidopsis thaliana]

          Length = 233

 Score =  114 bits (284), Expect = 9e-024
 Identities = 70/122 (57%), Positives = 81/122 (66%), Gaps = 19/122 (15%)
 Frame = +1

Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHEMH---GGGGGYFPRDEDL---DTRTI 330
           MADGYWNQQR  QQ HPPGG P KR RS+FEA       G GGGY+PRDEDL   DTRTI
Sbjct:   1 MADGYWNQQR--QQHHPPGG-PMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVPDTRTI 57

Query: 331 GSAYDRYLQSVQT---SSMPLGEAGPPRNGG---VAAMDEFMMRRGG----GGGLNGRDM 480
           GSAYDRYLQSVQ+    S+ +G +G    GG   V  +D+FM+RRGG      G NG  +
Sbjct:  58 GSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPNGHTI 117

Query: 481 GW 486
           G+
Sbjct: 118 GF 119

>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein
        [Arabidopsis lyrata subsp. lyrata]

          Length = 240

 Score =  103 bits (256), Expect = 2e-020
 Identities = 58/82 (70%), Positives = 61/82 (74%), Gaps = 9/82 (10%)
 Frame = +1

Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHE---MHGGGGGYFPRDEDL---DTRTI 330
           MADGYWNQQR  QQ H P G PPKR RS+FEA       G GGGY+PRDEDL   DTRTI
Sbjct:   1 MADGYWNQQR--QQHHLPSG-PPKRPRSDFEAPPSTMATGHGGGYYPRDEDLDVPDTRTI 57

Query: 331 GSAYDRYLQSVQTSSMPLGEAG 396
           GSAYDRYLQSVQTSS+  GE G
Sbjct:  58 GSAYDRYLQSVQTSSLQSGEGG 79

>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]

          Length = 214

 Score =  76 bits (186), Expect = 2e-012
 Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 13/83 (15%)
 Frame = +1

Query: 277 GGGGGYFPRDEDL---DTRTIGSAYDRYLQSVQT---SSMPLGEAGPPRNGG---VAAMD 429
           G GGGY+PRDEDL   DTRTIGSAYDRYLQSVQ+    S+ +G +G    GG   V  +D
Sbjct:  54 GHGGGYYPRDEDLDVPDTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTID 113

Query: 430 EFMMRRGG----GGGLNGRDMGW 486
           +FM+RRGG      G NG  +G+
Sbjct: 114 DFMLRRGGVLPLDHGPNGHTIGF 136

>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]

          Length = 183

 Score =  67 bits (161), Expect = 2e-009
 Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 30/116 (25%)
 Frame = +1

Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNF----------EAHEMHGGGGGYFPRDED-- 312
           M D YWNQ  H++   P      KR RS +           AHEMH     Y  RD+D  
Sbjct:   1 MGDAYWNQ--HREAPLPQSAGLLKRPRSEYVPDLPPSGMSSAHEMH----HYLGRDDDRG 54

Query: 313 ----LDTRTIGSAYDRYLQSVQTSSMPLGEAGPPRNGGVAAMDEFMMRRGGGGGLN 468
               +DT++IGSAYDRYLQS Q SS+ +GEA   +  G+A        R G GG++
Sbjct:  55 GPRVVDTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLA--------RAGAGGIS 102

>gi|255645608|gb|ACU23298.1| unknown [Glycine max]

          Length = 242

 Score =  63 bits (152), Expect = 2e-008
 Identities = 52/125 (41%), Positives = 63/125 (50%), Gaps = 30/125 (24%)
 Frame = +1

Query: 175 DGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHEMHGGGGGYFPRDED-------LDTRTIG 333
           DGYWN+Q+    Q        KR RS++  +EMH      F RD+D        DT+TIG
Sbjct:   3 DGYWNRQQTLLSQ----SGMLKRPRSDY-GNEMHNN----FARDDDRTGHRMLKDTKTIG 53

Query: 334 SAYDRYLQSVQTSSMPLGEA------GPPRNGG----VAAMDEFMMRRGGGGG----LNG 471
           SAYDRYLQS Q SS   GEA      G  R GG     +  D  +M R GGGG     NG
Sbjct:  54 SAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPNG 113

Query: 472 RDMGW 486
           R + +
Sbjct: 114 RGVNY 118

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,024,026,078
Number of Sequences: 15229318
Number of Extensions: 269024026078
Number of Successful Extensions: 82769251
Number of sequences better than 0.0: 0