BLASTX 7.6.2
Query= UN66639 /QuerySize=575
(574 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30699215|ref|NP_177820.2| RNA recognition motif-containing pr... 114 9e-024
gi|297842455|ref|XP_002889109.1| RNA recognition motif-containin... 103 2e-020
gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thal... 76 2e-012
gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana taba... 67 2e-009
gi|255645608|gb|ACU23298.1| unknown [Glycine max] 63 2e-008
>gi|30699215|ref|NP_177820.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 233
Score = 114 bits (284), Expect = 9e-024
Identities = 70/122 (57%), Positives = 81/122 (66%), Gaps = 19/122 (15%)
Frame = +1
Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHEMH---GGGGGYFPRDEDL---DTRTI 330
MADGYWNQQR QQ HPPGG P KR RS+FEA G GGGY+PRDEDL DTRTI
Sbjct: 1 MADGYWNQQR--QQHHPPGG-PMKRPRSDFEAPSSTMTIGHGGGYYPRDEDLDVPDTRTI 57
Query: 331 GSAYDRYLQSVQT---SSMPLGEAGPPRNGG---VAAMDEFMMRRGG----GGGLNGRDM 480
GSAYDRYLQSVQ+ S+ +G +G GG V +D+FM+RRGG G NG +
Sbjct: 58 GSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHGPNGHTI 117
Query: 481 GW 486
G+
Sbjct: 118 GF 119
>gi|297842455|ref|XP_002889109.1| RNA recognition motif-containing protein
[Arabidopsis lyrata subsp. lyrata]
Length = 240
Score = 103 bits (256), Expect = 2e-020
Identities = 58/82 (70%), Positives = 61/82 (74%), Gaps = 9/82 (10%)
Frame = +1
Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHE---MHGGGGGYFPRDEDL---DTRTI 330
MADGYWNQQR QQ H P G PPKR RS+FEA G GGGY+PRDEDL DTRTI
Sbjct: 1 MADGYWNQQR--QQHHLPSG-PPKRPRSDFEAPPSTMATGHGGGYYPRDEDLDVPDTRTI 57
Query: 331 GSAYDRYLQSVQTSSMPLGEAG 396
GSAYDRYLQSVQTSS+ GE G
Sbjct: 58 GSAYDRYLQSVQTSSLQSGEGG 79
>gi|2829909|gb|AAC00617.1| Hypothetical protein [Arabidopsis thaliana]
Length = 214
Score = 76 bits (186), Expect = 2e-012
Identities = 45/83 (54%), Positives = 55/83 (66%), Gaps = 13/83 (15%)
Frame = +1
Query: 277 GGGGGYFPRDEDL---DTRTIGSAYDRYLQSVQT---SSMPLGEAGPPRNGG---VAAMD 429
G GGGY+PRDEDL DTRTIGSAYDRYLQSVQ+ S+ +G +G GG V +D
Sbjct: 54 GHGGGYYPRDEDLDVPDTRTIGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTID 113
Query: 430 EFMMRRGG----GGGLNGRDMGW 486
+FM+RRGG G NG +G+
Sbjct: 114 DFMLRRGGVLPLDHGPNGHTIGF 136
>gi|62867580|emb|CAI84655.1| hypothetical protein [Nicotiana tabacum]
Length = 183
Score = 67 bits (161), Expect = 2e-009
Identities = 46/116 (39%), Positives = 59/116 (50%), Gaps = 30/116 (25%)
Frame = +1
Query: 169 MADGYWNQQRHQQQQHPPGGAPPKRRRSNF----------EAHEMHGGGGGYFPRDED-- 312
M D YWNQ H++ P KR RS + AHEMH Y RD+D
Sbjct: 1 MGDAYWNQ--HREAPLPQSAGLLKRPRSEYVPDLPPSGMSSAHEMH----HYLGRDDDRG 54
Query: 313 ----LDTRTIGSAYDRYLQSVQTSSMPLGEAGPPRNGGVAAMDEFMMRRGGGGGLN 468
+DT++IGSAYDRYLQS Q SS+ +GEA + G+A R G GG++
Sbjct: 55 GPRVVDTQSIGSAYDRYLQSSQLSSLSVGEANNYKGVGLA--------RAGAGGIS 102
>gi|255645608|gb|ACU23298.1| unknown [Glycine max]
Length = 242
Score = 63 bits (152), Expect = 2e-008
Identities = 52/125 (41%), Positives = 63/125 (50%), Gaps = 30/125 (24%)
Frame = +1
Query: 175 DGYWNQQRHQQQQHPPGGAPPKRRRSNFEAHEMHGGGGGYFPRDED-------LDTRTIG 333
DGYWN+Q+ Q KR RS++ +EMH F RD+D DT+TIG
Sbjct: 3 DGYWNRQQTLLSQ----SGMLKRPRSDY-GNEMHNN----FARDDDRTGHRMLKDTKTIG 53
Query: 334 SAYDRYLQSVQTSSMPLGEA------GPPRNGG----VAAMDEFMMRRGGGGG----LNG 471
SAYDRYLQS Q SS GEA G R GG + D +M R GGGG NG
Sbjct: 54 SAYDRYLQSGQLSSFTSGEASTVGGLGLARGGGGLSDHSLADPSVMGRHGGGGPDLAPNG 113
Query: 472 RDMGW 486
R + +
Sbjct: 114 RGVNY 118
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 269,024,026,078
Number of Sequences: 15229318
Number of Extensions: 269024026078
Number of Successful Extensions: 82769251
Number of sequences better than 0.0: 0
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