BLASTX 7.6.2
Query= UN66810 /QuerySize=764
(763 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular... 370 8e-103
TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular... 70 1e-012
TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein | chr5:... 70 1e-012
>TAIR9_protein||AT3G26990.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF618 (InterPro:IPR006903), Regulation of nuclear
pre-mRNA protein (InterPro:IPR006569), ENTH/VHS (InterPro:IPR008942);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G10060.1); Has 815 Blast hits to 806 proteins in 138 species:
Archae - 0; Bacteria - 10; Metazoa - 490; Fungi - 159; Plants - 81;
Viruses - 1; Other Eukaryotes - 74 (source: NCBI BLink). |
chr3:9948426-9951557 REVERSE
Length = 514
Score = 370 bits (948), Expect = 8e-103
Identities = 197/248 (79%), Positives = 211/248 (85%), Gaps = 12/248 (4%)
Frame = +2
Query: 2 GHTPGPTVVKEVQGQHAILRNCIEQLSVVETSRTSLISHLREALQEQELKLEQVRNHLQI 181
GH PGP VVKE+QGQH ILR+CIEQL +ETSRTSLISHLREALQEQELKLEQVRNHLQI
Sbjct: 205 GHAPGPAVVKELQGQHVILRDCIEQLGAMETSRTSLISHLREALQEQELKLEQVRNHLQI 264
Query: 182 ARFQSDRTGDLCKQLLDHGSSSQPPATEE----EAIKVSPAVSAPQSFTHIDVEQSAPLM 349
ARFQSDRTGDLC+QLLDHG SSQPPATEE E IKVS +APQSFTH DVEQSAP+M
Sbjct: 265 ARFQSDRTGDLCRQLLDHGGSSQPPATEEEESKEVIKVSSTAAAPQSFTHSDVEQSAPVM 324
Query: 350 FASNPPTQSAVDPRKTAAAAVVARLTASTSSAEMLSHVLSSLASEGIIG-NNPPAVTGTP 526
FASN PTQS DPRKTAAAAVVA+LTASTSSAEMLS+VLSSLASEGIIG NNPPAVT T
Sbjct: 325 FASN-PTQSLEDPRKTAAAAVVAKLTASTSSAEMLSYVLSSLASEGIIGNNNPPAVTETL 383
Query: 527 SSDEYPPEKRPKLQNHDQSYLQQLQQQQQNAATTSTATTSPLLLPPPPPPPYQLQPQYLQ 706
SS ++PPEKRPKLQNHDQSY L QN ATTS++T P PPPPP+QLQPQ+LQ
Sbjct: 384 SSVDFPPEKRPKLQNHDQSY---LSPHHQNTATTSSSTPPQ---PLPPPPPFQLQPQFLQ 437
Query: 707 PLQPPGPV 730
PLQPPGPV
Sbjct: 438 PLQPPGPV 445
>TAIR9_protein||AT5G65180.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 18
plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF618 (InterPro:IPR006903),
Regulation of nuclear pre-mRNA protein (InterPro:IPR006569), ENTH/VHS
(InterPro:IPR008942); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G10060.1); Has 3523 Blast hits to 3241
proteins in 333 species: Archae - 25; Bacteria - 251; Metazoa - 1575;
Fungi - 421; Plants - 142; Viruses - 17; Other Eukaryotes - 1092
(source: NCBI BLink). | chr5:26045625-26047806 FORWARD
Length = 440
Score = 70 bits (170), Expect = 1e-012
Identities = 34/91 (37%), Positives = 62/91 (68%)
Frame = +2
Query: 20 TVVKEVQGQHAILRNCIEQLSVVETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSD 199
++ KE++ + ILR +E+L VE SRTSL++HLREAL+EQE +LE +++ +Q+A+ Q++
Sbjct: 220 SLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTE 279
Query: 200 RTGDLCKQLLDHGSSSQPPATEEEAIKVSPA 292
++ K+L + + T ++ K++PA
Sbjct: 280 EAQNMQKRLNNETPVNNNNGTSGQSAKITPA 310
>TAIR9_protein||AT5G65180.2 | Symbols: | unknown protein |
chr5:26046478-26047806 FORWARD
Length = 312
Score = 70 bits (170), Expect = 1e-012
Identities = 34/91 (37%), Positives = 62/91 (68%)
Frame = +2
Query: 20 TVVKEVQGQHAILRNCIEQLSVVETSRTSLISHLREALQEQELKLEQVRNHLQIARFQSD 199
++ KE++ + ILR +E+L VE SRTSL++HLREAL+EQE +LE +++ +Q+A+ Q++
Sbjct: 92 SLAKELEEEENILRQSVEKLKSVEESRTSLVNHLREALREQESELENLQSQIQVAQEQTE 151
Query: 200 RTGDLCKQLLDHGSSSQPPATEEEAIKVSPA 292
++ K+L + + T ++ K++PA
Sbjct: 152 EAQNMQKRLNNETPVNNNNGTSGQSAKITPA 182
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,768,144,202
Number of Sequences: 33410
Number of Extensions: 29768144202
Number of Successful Extensions: 995611088
Number of sequences better than 0.0: 0
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