BLASTX 7.6.2
Query= UN66916 /QuerySize=815
(814 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SXQ6|FEN1A_ORYSJ Flap endonuclease 1a OS=Oryza sativa subsp... 153 1e-036
sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp... 126 2e-028
sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 P... 96 2e-019
sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1... 96 2e-019
sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1... 96 2e-019
sp|P26793|RAD27_YEAST Structure-specific endonuclease RAD27 OS=S... 95 4e-019
sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN... 94 8e-019
sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN... 94 1e-018
sp|P39750|RAD2_SCHPO DNA repair protein rad2 OS=Schizosaccharomy... 94 1e-018
sp|Q5UQW7|YL386_MIMIV Putative endonuclease L386 OS=Acanthamoeba... 63 2e-009
sp|Q9V0P9|FEN_PYRAB Flap structure-specific endonuclease OS=Pyro... 55 4e-007
>sp|Q9SXQ6|FEN1A_ORYSJ Flap endonuclease 1a OS=Oryza sativa subsp. japonica
GN=FEN-1a PE=2 SV=1
Length = 380
Score = 153 bits (386), Expect = 1e-036
Identities = 73/91 (80%), Positives = 83/91 (91%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFGAP+FLRHLMDPSS+KIPVMEF++AK+LEEL+LTMDQFIDLCILSGCDYCDSI+GIG
Sbjct: 184 LTFGAPRFLRHLMDPSSKKIPVMEFEVAKVLEELELTMDQFIDLCILSGCDYCDSIKGIG 243
Query: 652 GLTALKLIRQHGSIE-LSSKYKQRKYQIPED 741
G TALKLIRQHGSIE + + +YQIPED
Sbjct: 244 GQTALKLIRQHGSIESILENINKDRYQIPED 274
Score = 137 bits (343), Expect = 1e-031
Identities = 70/77 (90%), Positives = 72/77 (93%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M IKGLTKLLADNAP AMKEQKFESYFGR+IAVDASMSIYQFLIVVGRT E LTNEAGE
Sbjct: 1 MGIKGLTKLLADNAPKAMKEQKFESYFGRRIAVDASMSIYQFLIVVGRTGMETLTNEAGE 60
Query: 285 VTSHLQGMFNRTIRLLQ 335
VTSHLQGMFNRTIRLL+
Sbjct: 61 VTSHLQGMFNRTIRLLE 77
>sp|Q75LI2|FEN1B_ORYSJ Flap endonuclease 1b OS=Oryza sativa subsp. japonica
GN=FEN-1b PE=2 SV=1
Length = 412
Score = 126 bits (315), Expect = 2e-028
Identities = 61/91 (67%), Positives = 73/91 (80%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFGA +FLRHL D S ++ PV EF+++K+LEEL LTMDQFIDLCILSGCDYC++IRGIG
Sbjct: 184 LTFGARRFLRHLTDLSFKRSPVTEFEVSKVLEELGLTMDQFIDLCILSGCDYCENIRGIG 243
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
G ALKLIRQHG I E+ Q +Y +PED
Sbjct: 244 GQRALKLIRQHGYIEEVVQNLSQTRYSVPED 274
Score = 108 bits (269), Expect = 5e-023
Identities = 53/77 (68%), Positives = 64/77 (83%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M IKGLTKLLA++AP A ++ E Y GR +A+D S+SIYQFLIVVGR TE+LTNEAGE
Sbjct: 1 MGIKGLTKLLAEHAPGAAVRRRVEDYRGRVVAIDTSLSIYQFLIVVGRKGTEVLTNEAGE 60
Query: 285 VTSHLQGMFNRTIRLLQ 335
VTSHLQGM NRT+R+L+
Sbjct: 61 VTSHLQGMLNRTVRILE 77
>sp|Q58DH8|FEN1_BOVIN Flap endonuclease 1 OS=Bos taurus GN=FEN1 PE=2 SV=1
Length = 380
Score = 96 bits (238), Expect = 2e-019
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G DYC+SIRGIG
Sbjct: 183 LTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIG 242
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
A+ LI++H SI E+ + KY +PE+
Sbjct: 243 PKRAVDLIQKHKSIEEIVRRLDPNKYPVPEN 273
Score = 95 bits (235), Expect = 4e-019
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M I+GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R ++L NE GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGE 59
Query: 285 VTSHLQGMFNRTIRLLQ 335
TSHL GMF RTIR+++
Sbjct: 60 TTSHLMGMFYRTIRMME 76
>sp|P39748|FEN1_HUMAN Flap endonuclease 1 OS=Homo sapiens GN=FEN1 PE=1 SV=1
Length = 380
Score = 96 bits (238), Expect = 2e-019
Identities = 45/91 (49%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFG+P +RHL ++K+P+ EF +++IL+EL L +QF+DLCIL G DYC+SIRGIG
Sbjct: 183 LTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRGIG 242
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
A+ LI++H SI E+ + KY +PE+
Sbjct: 243 PKRAVDLIQKHKSIEEIVRRLDPNKYPVPEN 273
Score = 95 bits (235), Expect = 4e-019
Identities = 48/77 (62%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M I+GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R ++L NE GE
Sbjct: 1 MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGE 59
Query: 285 VTSHLQGMFNRTIRLLQ 335
TSHL GMF RTIR+++
Sbjct: 60 TTSHLMGMFYRTIRMME 76
>sp|P39749|FEN1_MOUSE Flap endonuclease 1 OS=Mus musculus GN=Fen1 PE=1 SV=1
Length = 378
Score = 96 bits (238), Expect = 2e-019
Identities = 44/91 (48%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFG+P +RHL ++K+P+ EF ++++L+EL L +QF+DLCIL G DYC+SIRGIG
Sbjct: 181 LTFGSPVLMRHLTASEAKKLPIQEFHLSRVLQELGLNQEQFVDLCILLGSDYCESIRGIG 240
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
A+ LI++H SI E+ + KY +PE+
Sbjct: 241 AKRAVDLIQKHKSIEEIVRRLDPSKYPVPEN 271
Score = 85 bits (209), Expect = 5e-016
Identities = 47/75 (62%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M I GL KL+AD AP+A++E +SYFGRK+A+DASMSIYQFLI V R ++L NE GE
Sbjct: 1 MGIHGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAV-RQGGDVLQNEEGE 59
Query: 285 VTSHLQGMFNRTIRL 329
TS L GMF RTIR+
Sbjct: 60 TTS-LMGMFYRTIRM 73
>sp|P26793|RAD27_YEAST Structure-specific endonuclease RAD27 OS=Saccharomyces
cerevisiae GN=RAD27 PE=1 SV=1
Length = 382
Score = 95 bits (235), Expect = 4e-019
Identities = 47/96 (48%), Positives = 63/96 (65%), Gaps = 6/96 (6%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
L + P LRHL ++K P+ E D +L L LT++QF+DLCI+ GCDYC+SIRG+G
Sbjct: 181 LCYRTPFLLRHLTFSEAKKEPIHEIDTELVLRGLDLTIEQFVDLCIMLGCDYCESIRGVG 240
Query: 652 GLTALKLIRQHGSIEL------SSKYKQRKYQIPED 741
+TALKLI+ HGSIE S + K++IPED
Sbjct: 241 PVTALKLIKTHGSIEKIVEFIESGESNNTKWKIPED 276
Score = 91 bits (225), Expect = 6e-018
Identities = 44/87 (50%), Positives = 63/87 (72%), Gaps = 1/87 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M IKGL +++++ P+A+++ +S+FGRK+A+DASMS+YQFLI V + LTNEAGE
Sbjct: 1 MGIKGLNAIISEHVPSAIRKSDIKSFFGRKVAIDASMSLYQFLIAVRQQDGGQLTNEAGE 60
Query: 285 VTSHLQGMFNRTIRLLQES*CNC-IFD 362
TSHL GMF RT+R++ C +FD
Sbjct: 61 TTSHLMGMFYRTLRMIDNGIKPCYVFD 87
>sp|P70054|FEN1B_XENLA Flap endonuclease 1-B OS=Xenopus laevis GN=fen1-b PE=1
SV=1
Length = 382
Score = 94 bits (233), Expect = 8e-019
Identities = 51/77 (66%), Positives = 57/77 (74%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M I GL KL+AD AP A+KE +SYFGRK+AVDASM IYQFLI V R ML NE GE
Sbjct: 1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAV-RQDGNMLQNEEGE 59
Query: 285 VTSHLQGMFNRTIRLLQ 335
TSHL GMF RTIR+L+
Sbjct: 60 TTSHLMGMFYRTIRMLE 76
Score = 92 bits (226), Expect = 5e-018
Identities = 42/91 (46%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFG P LRHL ++K+P+ EF + ++ +++ + +QF+DLCIL G DYC++IRGIG
Sbjct: 183 LTFGTPVLLRHLTASEAKKLPIQEFHLNRVFQDIGINHEQFVDLCILLGSDYCETIRGIG 242
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
A+ LIRQH +I E+ +KY IPE+
Sbjct: 243 PKRAIDLIRQHKTIEEIIDNIDLKKYPIPEN 273
>sp|P70040|FEN1A_XENLA Flap endonuclease 1-A OS=Xenopus laevis GN=fen1-a PE=1
SV=1
Length = 382
Score = 94 bits (232), Expect = 1e-018
Identities = 42/91 (46%), Positives = 64/91 (70%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
LTFG P LRHL ++K+P+ EF + ++++++ +T +QF+DLCIL G DYC++IRGIG
Sbjct: 183 LTFGTPVLLRHLTASEAKKLPIQEFHLNRVIQDIGITHEQFVDLCILLGSDYCETIRGIG 242
Query: 652 GLTALKLIRQHGSI-ELSSKYKQRKYQIPED 741
A+ LIRQH +I E+ +KY +PE+
Sbjct: 243 PKRAIDLIRQHKTIDEIIDNIDLKKYPVPEN 273
Score = 91 bits (224), Expect = 8e-018
Identities = 49/77 (63%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M I GL KL+AD AP A+KE +SYFGRK+AVDASM IYQFLI V R L NE GE
Sbjct: 1 MGIHGLAKLIADVAPAAIKEHDIKSYFGRKVAVDASMCIYQFLIAV-RQDGNTLQNEEGE 59
Query: 285 VTSHLQGMFNRTIRLLQ 335
TSHL GMF RTIR+++
Sbjct: 60 TTSHLMGMFYRTIRMVE 76
>sp|P39750|RAD2_SCHPO DNA repair protein rad2 OS=Schizosaccharomyces pombe
GN=rad2 PE=1 SV=1
Length = 380
Score = 94 bits (232), Expect = 1e-018
Identities = 46/91 (50%), Positives = 62/91 (68%), Gaps = 1/91 (1%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
L F AP LRHL RK P+ E++I K L L ++++QF+DLCIL GCDYC+ IRG+G
Sbjct: 184 LCFQAPVLLRHLTFSEQRKEPISEYNIEKALNGLDMSVEQFVDLCILLGCDYCEPIRGVG 243
Query: 652 GLTALKLIRQHGSIELSSKYKQR-KYQIPED 741
A++LIRQ+G+++ K R KY IPED
Sbjct: 244 PARAVELIRQYGTLDRFVKEADRSKYPIPED 274
Score = 88 bits (217), Expect = 5e-017
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Frame = +3
Query: 105 MVIKGLTKLLADNAPNAMKEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGE 284
M IKGL ++L+++AP ++K ++YFGRK+A+DASMS+YQFLI V + L NE GE
Sbjct: 1 MGIKGLAQVLSEHAPASVKHNDIKNYFGRKVAIDASMSLYQFLIQVRSQDGQQLMNEQGE 60
Query: 285 VTSHLQGMFNRTIRLLQES*CNC-IFD 362
TSHL GMF RT+R++ C +FD
Sbjct: 61 TTSHLMGMFYRTLRIVDNGIKPCFVFD 87
>sp|Q5UQW7|YL386_MIMIV Putative endonuclease L386 OS=Acanthamoeba polyphaga
mimivirus GN=MIMI_L386 PE=3 SV=1
Length = 473
Score = 63 bits (151), Expect = 2e-009
Identities = 30/87 (34%), Positives = 53/87 (60%)
Frame = +1
Query: 472 LTFGAPKFLRHLMDPSSRKIPVMEFDIAKILEELQLTMDQFIDLCILSGCDYCDSIRGIG 651
L GAP + ++ ++ ++ + +L L LTM++FIDLC+L GCDYCD+I+GIG
Sbjct: 188 LPLGAPYMFKDMLGLNNLNKNIIIVKLKDVLGFLGLTMNEFIDLCVLLGCDYCDNIKGIG 247
Query: 652 GLTALKLIRQHGSIELSSKYKQRKYQI 732
A KLI ++ +++ ++ + +I
Sbjct: 248 PKNAYKLIVEYRTLDKVLEFLHKSNKI 274
>sp|Q9V0P9|FEN_PYRAB Flap structure-specific endonuclease OS=Pyrococcus abyssi
GN=fen PE=3 SV=1
Length = 343
Score = 55 bits (132), Expect = 4e-007
Identities = 26/59 (44%), Positives = 39/59 (66%)
Frame = +3
Query: 159 KEQKFESYFGRKIAVDASMSIYQFLIVVGRTRTEMLTNEAGEVTSHLQGMFNRTIRLLQ 335
KE + E+ +G+KIA+DA +IYQFL + + L + G +TSHL G+F RTI L++
Sbjct: 12 KEIELENLYGKKIAIDALNAIYQFLSTIRQRDGTPLMDSKGRITSHLSGLFYRTINLME 70
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 227,473,488,116
Number of Sequences: 518415
Number of Extensions: 227473488116
Number of Successful Extensions: 1422309314
Number of sequences better than 0.0: 0
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