BLASTX 7.6.2
Query= UN66953 /QuerySize=633
(632 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23... 215 2e-056
TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSB... 215 2e-056
TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosyst... 204 4e-053
>TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23 | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2047940-2049186
FORWARD
Length = 264
Score = 215 bits (547), Expect = 2e-056
Identities = 102/112 (91%), Positives = 110/112 (98%)
Frame = +3
Query: 297 LQVPAKWNPSREVEYSGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL 476
+QVPAKWNPS+E+EY GQVLR+EDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL
Sbjct: 105 VQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL 164
Query: 477 LGKQAYFGETASEGGFDNNAVATANILDTNIQDVGGKPYYYLSVLTRTADGD 632
LGKQAYFGETASEGGFDNNAVATANIL+++ Q+VGGKPYYYLSVLTRTADGD
Sbjct: 165 LGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGD 216
Score = 115 bits (287), Expect = 3e-026
Identities = 57/67 (85%), Positives = 64/67 (95%)
Frame = +1
Query: 49 MAYSACFLHQSALASSAARSSSPNSSQRHLSLSRPVQIVCKAQQHHQEDNSAVSRRLALA 228
MAYSACFLHQSALASSAARSSS +SSQRH+SLS+PVQI+CKAQQ H++DNSAVSRRLAL
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALT 60
Query: 229 LLIGAAA 249
LL+GAAA
Sbjct: 61 LLVGAAA 67
>TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2048076-2049186
FORWARD
Length = 220
Score = 215 bits (547), Expect = 2e-056
Identities = 102/112 (91%), Positives = 110/112 (98%)
Frame = +3
Query: 297 LQVPAKWNPSREVEYSGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL 476
+QVPAKWNPS+E+EY GQVLR+EDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL
Sbjct: 61 VQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYL 120
Query: 477 LGKQAYFGETASEGGFDNNAVATANILDTNIQDVGGKPYYYLSVLTRTADGD 632
LGKQAYFGETASEGGFDNNAVATANIL+++ Q+VGGKPYYYLSVLTRTADGD
Sbjct: 121 LGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGD 172
>TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosystem II subunit
P-2); calcium ion binding | chr2:13119047-13120090 REVERSE
Length = 262
Score = 204 bits (518), Expect = 4e-053
Identities = 96/127 (75%), Positives = 113/127 (88%)
Frame = +3
Query: 252 QRRTQTSRHTVEMDSLQVPAKWNPSREVEYSGQVLRYEDNFDATSNLNVMVTPTDKKSIT 431
++ T +T E +Q+P+KWNPS+E+EY GQVLR+EDNFDATSN++VM+TPTDKKSIT
Sbjct: 88 KKNTDFLPYTGEGFKIQIPSKWNPSKEIEYPGQVLRFEDNFDATSNVSVMITPTDKKSIT 147
Query: 432 DYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILDTNIQDVGGKPYYYLSVL 611
DYGSPE+FLSQVNYLLGKQAY GETASEGGFD NAVATANIL+T+ Q++GGK YYYLSVL
Sbjct: 148 DYGSPEQFLSQVNYLLGKQAYVGETASEGGFDANAVATANILETSTQEIGGKEYYYLSVL 207
Query: 612 TRTADGD 632
TRTADGD
Sbjct: 208 TRTADGD 214
Score = 91 bits (224), Expect = 5e-019
Identities = 49/68 (72%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
Frame = +1
Query: 49 MAYSACFLHQSALASSAARSSSPNSSQ-RHLSLSRPVQIVCKAQQHHQEDNSAVSRRLAL 225
MAYS FLHQSALASSA RSSS +SS RH+SLSRPV +VC+AQQ + +NSAV RRLAL
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 226 ALLIGAAA 249
LL+GAAA
Sbjct: 61 TLLVGAAA 68
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,858,225,369
Number of Sequences: 33410
Number of Extensions: 29858225369
Number of Successful Extensions: 1000815420
Number of sequences better than 0.0: 0
|
