BLASTX 7.6.2
Query= UN66979 /QuerySize=791
(790 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G10410.1 | Symbols: | INVOLVED IN: N-terminal... 300 1e-081
TAIR9_protein||AT1G59650.1 | Symbols: CW14 | CW14 | chr1:2192009... 232 2e-061
>TAIR9_protein||AT1G10410.1 | Symbols: | INVOLVED IN: N-terminal protein
myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF1336 (InterPro:IPR009769);
BEST Arabidopsis thaliana protein match is: CW14 (TAIR:AT1G59650.1);
Has 144 Blast hits to 144 proteins in 21 species: Archae - 0; Bacteria
- 0; Metazoa - 9; Fungi - 2; Plants - 115; Viruses - 0; Other
Eukaryotes - 18 (source: NCBI BLink). | chr1:3416842-3419264 REVERSE
Length = 486
Score = 300 bits (766), Expect = 1e-081
Identities = 176/269 (65%), Positives = 197/269 (73%), Gaps = 21/269 (7%)
Frame = +1
Query: 22 MGGCVSTPKSCVGSKLR-SKRRKSRKRRKLQRKRAAA------GSFDNNLDHPPNNLPTP 180
MGGCVSTPKSCVG+KLR SKRRKSR+RRK+QRKRAA GSFD NLDH N P
Sbjct: 1 MGGCVSTPKSCVGAKLRSSKRRKSRRRRKIQRKRAAVSSRLSDGSFD-NLDHHHRNFSNP 59
Query: 181 SFRASGEEAWFESNVAFETDCDDDFHSVHDDDTSSLNGGERASDSSSITTSSTGDSDSNS 360
S RA+GE+AWFESNVAFETDCDDDFHSVH +D SLNG ER S SS+ TTSST D+DSN
Sbjct: 60 SSRATGEDAWFESNVAFETDCDDDFHSVH-EDALSLNGSERVSLSSTTTTSSTRDTDSNE 118
Query: 361 NASMPRSKSDGGINDTDQPDFIDSSSSADEG----GGALPSNCLPCLNPITVVPCVEKGR 528
M +SKSDG +NDT+QPD ID SSADEG LPSNCLPCLN T VP ++K R
Sbjct: 119 --VMSQSKSDGDLNDTNQPDLID--SSADEGLLENCRILPSNCLPCLN-TTTVPSIDKRR 173
Query: 529 SLSSSPPSSRKKASLKLSYKWREGHASGALFLSKMQLKRPVAGSQFLSVQSTRK-C*IVG 705
SLSSSPPSSRKK+SL+LSYKWREGHASGALFLSKMQLKRP+AGSQ +K
Sbjct: 174 SLSSSPPSSRKKSSLRLSYKWREGHASGALFLSKMQLKRPIAGSQVPFCPIDKKMLDCWS 233
Query: 706 HHRANSFRVVANLF--KDRRRVAASHAAY 786
NSFRV + + ++ A SHAAY
Sbjct: 234 TIDPNSFRVRGKTYLREKKKEFAPSHAAY 262
>TAIR9_protein||AT1G59650.1 | Symbols: CW14 | CW14 | chr1:21920099-21922670
FORWARD
Length = 493
Score = 232 bits (591), Expect = 2e-061
Identities = 148/282 (52%), Positives = 187/282 (66%), Gaps = 43/282 (15%)
Frame = +1
Query: 22 MGGCVSTPKSCVGSKLR-SKRRKSRKRRKLQRKRAAA------GSFDNNLDHPPNNLPTP 180
MGGCVSTPKSCVG K+R SKRRK+R RRK+Q+KR + GSFDNN P
Sbjct: 1 MGGCVSTPKSCVGGKIRSSKRRKTRTRRKIQKKRVVSSSRLSDGSFDNN----------P 50
Query: 181 SFRASGEEAWFESNVAFETDCDDDFHSVHDDDTSSLNGGERASDS--SSITTSSTGDSDS 354
+FRAS +EAWF+SN+AFETDCDDDFHSV +DT S+NG ER S S SS+ S+ G S
Sbjct: 51 TFRASVDEAWFDSNLAFETDCDDDFHSV-QEDTLSVNGCERISVSSMSSVKDSNLGGSAR 109
Query: 355 NSNAS-MPRSKSDGGINDTDQPDFI-------DSSSSADEG----GGALPSNCLPCLNPI 498
NS + + +SKS+ + DT Q FI D SS+ DEG G LPSNCLPCLN
Sbjct: 110 NSLSDVISQSKSESALIDTKQAVFIDEISSNADGSSNKDEGLLENCGILPSNCLPCLN-- 167
Query: 499 TVVPCVEKGRSLSSSPPSSRKKASLKLSYKWREGHASGALFLSKMQLKRPVAGSQF---- 666
+ VP +EK RSLSSSPPS+RKKA++KLS+KWREGH +G LF + MQL+RP+AGSQ
Sbjct: 168 STVPSIEKRRSLSSSPPSTRKKAAVKLSFKWREGHPTGPLFSTTMQLQRPMAGSQVPFCP 227
Query: 667 LSVQSTRKC*IVGHHRANSFRVVA-NLFKDRRR-VAASHAAY 786
L + I+ SFRV + F+D+++ +A ++AAY
Sbjct: 228 LEKKMFDSWSII---EPGSFRVRSKTYFRDKKKELAPNYAAY 266
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,858,225,369
Number of Sequences: 33410
Number of Extensions: 29858225369
Number of Successful Extensions: 1000815420
Number of sequences better than 0.0: 0
|