BLASTX 7.6.2
Query= UN66999 /QuerySize=822
(821 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G45630.1 | Symbols: | RNA recognition motif (... 196 2e-050
TAIR9_protein||AT5G60170.1 | Symbols: | RNA binding / nucleic a... 163 1e-040
>TAIR9_protein||AT3G45630.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:16748751-16753190 REVERSE
Length = 990
Score = 196 bits (497), Expect = 2e-050
Identities = 123/264 (46%), Positives = 161/264 (60%), Gaps = 11/264 (4%)
Frame = +1
Query: 4 MEITTSLRDERPDMAMAIGSKCDPGSIRQPGHEVSTSSHLEQCRVDS-ANTDEKAIRSET 180
M ITT+ RDE P + + IG+ CD GSI Q ++V +LEQCR S NT +A S
Sbjct: 452 MGITTNSRDETPGVPVVIGTHCDLGSITQSDNDV---QNLEQCRKQSPTNTYAEADISLN 508
Query: 181 EVPYTKPEWDWRSDLQSQMQVSSKWDVEDKSSLDSQRHHPEEDIILSRFLSNSSSSILNS 360
+ ++PEWDWRS LQSQ+ V +V D SS ++ R E + S +SS SIL+S
Sbjct: 509 GIHGSRPEWDWRSGLQSQIDVKEPLEVNDFSSFNNNRRGIAEAVSHSTSKFSSSISILDS 568
Query: 361 NRLASSSSCSLPSEHSGVNDSNLRFSSDSDRLHLPNGYGEKSMFSVEHSLFANDGRNKVR 540
N LAS S + + + + F SDRLHLPNG+ EK+M ++EHSLFAN+GR+ ++
Sbjct: 569 NHLASRSFQNRETSCGMDSKTGSSFEIGSDRLHLPNGFSEKAMSNMEHSLFANEGRSNIQ 628
Query: 541 NGEDDKIPNILGLDFDPWDE---SPNNLAELLGEVDQRSSSTLKPGNLLKQHNSQSRFSL 711
N EDD I NI LDFDPWDE S +N A+LLG+ D R +STL+ NLLKQHN QSRFS
Sbjct: 629 NTEDDIISNI--LDFDPWDESLTSQHNFAKLLGQSDHR-ASTLESSNLLKQHNDQSRFSF 685
Query: 712 PDMKNLVIKHLIG-DHSIYGQFQR 780
+ + +SIYGQ R
Sbjct: 686 ARHEESNSQAYDNRSYSIYGQLSR 709
>TAIR9_protein||AT5G60170.1 | Symbols: | RNA binding / nucleic acid binding /
nucleotide binding / protein binding / zinc ion binding |
chr5:24228178-24232394 FORWARD
Length = 986
Score = 163 bits (412), Expect = 1e-040
Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 3/137 (2%)
Frame = +1
Query: 4 MEITTSLRDERPDMAMAIGSKCDPGSIRQPGHEVSTSSHLEQCRVDSA-NTDEKAIRSET 180
M IT + RDERPD+ MAIGS+ D GSIRQPG EVS LEQCR+DS+ NTD+KAI E
Sbjct: 461 MRITMNCRDERPDITMAIGSQSDQGSIRQPGSEVSKLPDLEQCRIDSSINTDKKAISLED 520
Query: 181 EVPYTKPEWDWRSDLQSQMQVSSKWDVEDKSSLDSQRHHPEEDIILSRFLSNSSSSILNS 360
+P T+P WDW SDLQSQMQ SSK VED S+LDSQR HPEEDII SR LSN SSS L++
Sbjct: 521 RIPRTRPGWDWISDLQSQMQGSSKLQVEDISTLDSQRPHPEEDIIHSRLLSNLSSSSLDT 580
Query: 361 NRLASSSSCSLPSEHSG 411
N +AS S SLP E G
Sbjct: 581 NHMASRS--SLPCEVRG 595
Score = 155 bits (390), Expect = 4e-038
Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
Frame = +1
Query: 253 WDVEDKSSLDSQRHHPEEDI-ILSRFLSNSSSSILNSNRLASSSSCSLPSEHSGVNDSNL 429
W + +S + EDI L + I++S L++ SS SL + H S
Sbjct: 531 WISDLQSQMQGSSKLQVEDISTLDSQRPHPEEDIIHSRLLSNLSSSSLDTNHMASRSSLP 590
Query: 430 RFSSDSDRLHLPNGYGEKSMFSVEHSLFANDGRNKVRNGEDDKIPNILGLDFDPWDE--- 600
SDRLHLPNG+GEKSM SVEHSLFAN+GRNKV N ED + NIL LDFDPWDE
Sbjct: 591 CEVRGSDRLHLPNGFGEKSMSSVEHSLFANEGRNKVNNAEDAILSNILSLDFDPWDESLT 650
Query: 601 SPNNLAELLGEVDQRSSSTLKPGNLLKQHNSQSRFSLPDMKNLVIKHLIGD-HSIYGQFQ 777
SP+NLAELLGEVDQR SSTLKP N LKQHN+QSRFS + + + +SIYGQ
Sbjct: 651 SPHNLAELLGEVDQR-SSTLKPSNFLKQHNNQSRFSFARYEESSNQAYDSENYSIYGQLS 709
Query: 778 R 780
R
Sbjct: 710 R 710
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,858,225,369
Number of Sequences: 33410
Number of Extensions: 29858225369
Number of Successful Extensions: 1000815420
Number of sequences better than 0.0: 0
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