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TAIR blast output of UN66999


BLASTX 7.6.2

Query= UN66999 /QuerySize=822
        (821 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G45630.1 | Symbols:  | RNA recognition motif (...    196   2e-050
TAIR9_protein||AT5G60170.1 | Symbols:  | RNA binding / nucleic a...    163   1e-040

>TAIR9_protein||AT3G45630.1 | Symbols:  | RNA recognition motif (RRM)-containing
        protein | chr3:16748751-16753190 REVERSE

          Length = 990

 Score =  196 bits (497), Expect = 2e-050
 Identities = 123/264 (46%), Positives = 161/264 (60%), Gaps = 11/264 (4%)
 Frame = +1

Query:   4 MEITTSLRDERPDMAMAIGSKCDPGSIRQPGHEVSTSSHLEQCRVDS-ANTDEKAIRSET 180
           M ITT+ RDE P + + IG+ CD GSI Q  ++V    +LEQCR  S  NT  +A  S  
Sbjct: 452 MGITTNSRDETPGVPVVIGTHCDLGSITQSDNDV---QNLEQCRKQSPTNTYAEADISLN 508

Query: 181 EVPYTKPEWDWRSDLQSQMQVSSKWDVEDKSSLDSQRHHPEEDIILSRFLSNSSSSILNS 360
            +  ++PEWDWRS LQSQ+ V    +V D SS ++ R    E +  S    +SS SIL+S
Sbjct: 509 GIHGSRPEWDWRSGLQSQIDVKEPLEVNDFSSFNNNRRGIAEAVSHSTSKFSSSISILDS 568

Query: 361 NRLASSSSCSLPSEHSGVNDSNLRFSSDSDRLHLPNGYGEKSMFSVEHSLFANDGRNKVR 540
           N LAS S  +  +     + +   F   SDRLHLPNG+ EK+M ++EHSLFAN+GR+ ++
Sbjct: 569 NHLASRSFQNRETSCGMDSKTGSSFEIGSDRLHLPNGFSEKAMSNMEHSLFANEGRSNIQ 628

Query: 541 NGEDDKIPNILGLDFDPWDE---SPNNLAELLGEVDQRSSSTLKPGNLLKQHNSQSRFSL 711
           N EDD I NI  LDFDPWDE   S +N A+LLG+ D R +STL+  NLLKQHN QSRFS 
Sbjct: 629 NTEDDIISNI--LDFDPWDESLTSQHNFAKLLGQSDHR-ASTLESSNLLKQHNDQSRFSF 685

Query: 712 PDMKNLVIKHLIG-DHSIYGQFQR 780
              +    +      +SIYGQ  R
Sbjct: 686 ARHEESNSQAYDNRSYSIYGQLSR 709

>TAIR9_protein||AT5G60170.1 | Symbols:  | RNA binding / nucleic acid binding /
        nucleotide binding / protein binding / zinc ion binding |
        chr5:24228178-24232394 FORWARD

          Length = 986

 Score =  163 bits (412), Expect = 1e-040
 Identities = 90/137 (65%), Positives = 102/137 (74%), Gaps = 3/137 (2%)
 Frame = +1

Query:   4 MEITTSLRDERPDMAMAIGSKCDPGSIRQPGHEVSTSSHLEQCRVDSA-NTDEKAIRSET 180
           M IT + RDERPD+ MAIGS+ D GSIRQPG EVS    LEQCR+DS+ NTD+KAI  E 
Sbjct: 461 MRITMNCRDERPDITMAIGSQSDQGSIRQPGSEVSKLPDLEQCRIDSSINTDKKAISLED 520

Query: 181 EVPYTKPEWDWRSDLQSQMQVSSKWDVEDKSSLDSQRHHPEEDIILSRFLSNSSSSILNS 360
            +P T+P WDW SDLQSQMQ SSK  VED S+LDSQR HPEEDII SR LSN SSS L++
Sbjct: 521 RIPRTRPGWDWISDLQSQMQGSSKLQVEDISTLDSQRPHPEEDIIHSRLLSNLSSSSLDT 580

Query: 361 NRLASSSSCSLPSEHSG 411
           N +AS S  SLP E  G
Sbjct: 581 NHMASRS--SLPCEVRG 595


 Score =  155 bits (390), Expect = 4e-038
 Identities = 94/181 (51%), Positives = 112/181 (61%), Gaps = 6/181 (3%)
 Frame = +1

Query: 253 WDVEDKSSLDSQRHHPEEDI-ILSRFLSNSSSSILNSNRLASSSSCSLPSEHSGVNDSNL 429
           W  + +S +        EDI  L     +    I++S  L++ SS SL + H     S  
Sbjct: 531 WISDLQSQMQGSSKLQVEDISTLDSQRPHPEEDIIHSRLLSNLSSSSLDTNHMASRSSLP 590

Query: 430 RFSSDSDRLHLPNGYGEKSMFSVEHSLFANDGRNKVRNGEDDKIPNILGLDFDPWDE--- 600
                SDRLHLPNG+GEKSM SVEHSLFAN+GRNKV N ED  + NIL LDFDPWDE   
Sbjct: 591 CEVRGSDRLHLPNGFGEKSMSSVEHSLFANEGRNKVNNAEDAILSNILSLDFDPWDESLT 650

Query: 601 SPNNLAELLGEVDQRSSSTLKPGNLLKQHNSQSRFSLPDMKNLVIKHLIGD-HSIYGQFQ 777
           SP+NLAELLGEVDQR SSTLKP N LKQHN+QSRFS    +    +    + +SIYGQ  
Sbjct: 651 SPHNLAELLGEVDQR-SSTLKPSNFLKQHNNQSRFSFARYEESSNQAYDSENYSIYGQLS 709

Query: 778 R 780
           R
Sbjct: 710 R 710

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,858,225,369
Number of Sequences: 33410
Number of Extensions: 29858225369
Number of Successful Extensions: 1000815420
Number of sequences better than 0.0: 0