BLASTX 7.6.2
Query= UN67431 /QuerySize=328
(327 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14780.1 | Symbols: | FUNCTIONS IN: molecular... 143 3e-035
TAIR9_protein||AT1G29690.1 | Symbols: CAD1 | CAD1 (constitutivel... 59 4e-010
>TAIR9_protein||AT1G14780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Membrane
attack complex component/perforin/complement C9 (InterPro:IPR001862);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G24290.2); Has 119 Blast hits to 118 proteins in 17 species:
Archae - 0; Bacteria - 0; Metazoa - 14; Fungi - 0; Plants - 105;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:5091020-5093873 FORWARD
Length = 628
Score = 143 bits (358), Expect = 3e-035
Identities = 65/82 (79%), Positives = 72/82 (87%)
Frame = -2
Query: 326 NRYFEPLNGKKFSHVCTAPVKYDPNWITTTTTNKTSNNIACIVTGAQLEVKKHGSKSVLH 147
+RYFEPLNGKKFSHVCT PVKYDPNWI TT+ +K+ N++A IVTGAQLEVKKHGSKSVLH
Sbjct: 441 DRYFEPLNGKKFSHVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTGAQLEVKKHGSKSVLH 500
Query: 146 LRLRFTGVSDRNVVQKEWVHGP 81
LRLR+T VSD VVQ WVHGP
Sbjct: 501 LRLRYTKVSDHYVVQNSWVHGP 522
>TAIR9_protein||AT1G29690.1 | Symbols: CAD1 | CAD1 (constitutively activated
cell death 1) | chr1:10379310-10381861 REVERSE
Length = 562
Score = 59 bits (142), Expect = 4e-010
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Frame = -2
Query: 326 NRYFEPLNGKKFSHVCTAPVKYDPNWITTTTTNKTSNNIACIVTGAQLEVKKHGSKSVLH 147
+R+FEP+ K FSHV T+P+++ T T+ + IVTGAQL V GSK+VLH
Sbjct: 414 SRWFEPIKWKNFSHVSTSPIEH-------TETHIGDLSGVHIVTGAQLGVWDFGSKNVLH 466
Query: 146 LRLRFTGVSDRNVVQKEWVHGP 81
L+L F+ V + + W H P
Sbjct: 467 LKLLFSKVPGCTIRRSVWDHTP 488
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,951,124,998
Number of Sequences: 33410
Number of Extensions: 29951124998
Number of Successful Extensions: 1006090404
Number of sequences better than 0.0: 0
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