Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN67797


BLASTX 7.6.2

Query= UN67797 /QuerySize=613
        (612 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297797988|ref|XP_002866878.1| hypothetical protein ARALYDRAFT...    214   1e-053
gi|18420505|ref|NP_568066.1| uncharacterized protein [Arabidopsi...    206   3e-051
gi|3080438|emb|CAA18755.1| putative protein [Arabidopsis thaliana]     175   5e-042
gi|255576188|ref|XP_002528988.1| conserved hypothetical protein ...     57   2e-006

>gi|297797988|ref|XP_002866878.1| hypothetical protein ARALYDRAFT_490751
        [Arabidopsis lyrata subsp. lyrata]

          Length = 657

 Score =  214 bits (543), Expect = 1e-053
 Identities = 120/187 (64%), Positives = 137/187 (73%), Gaps = 17/187 (9%)
 Frame = +3

Query:  90 MLRKSVLE----LSIKRFPRNLGAQRFHLSSSRKVSTSGKN---GTNPVGKPDASKV--- 239
           MLRKSVLE    LSIKRFPRNLGAQRFHLSSSR  STSGKN   G  PVGKP ASKV   
Sbjct:   1 MLRKSVLELSSRLSIKRFPRNLGAQRFHLSSSRNASTSGKNGLPGAKPVGKPYASKVDPP 60

Query: 240 ---PPPPPAGKPDGSKGGSAKVFIGGAAIAGAFLLAYQTGYLDQYLGNERQKLSELVKSG 410
              PPPPP GKP  SKG S+KV IGG AIAGAFL+AYQTGYLDQYLG E+QKLSE + S 
Sbjct:  61 KVTPPPPPVGKPSESKGNSSKVVIGGVAIAGAFLVAYQTGYLDQYLGKEQQKLSERIHSD 120

Query: 411 SVTEKLEEVHHSSVEDSAGIGSSVDGKAETQPEL---PAFVGMQSDFVEVQPESDPTPER 581
           +VT K+EE HH +V       +  DG+ ETQPE+    A  G+QSD +EVQPESD + +R
Sbjct: 121 AVTNKVEEAHHLNVPSGVEDSTEKDGQVETQPEVTHSEASGGVQSD-IEVQPESDLSSDR 179

Query: 582 YTYVSSS 602
           +TY+SS+
Sbjct: 180 FTYISSN 186

>gi|18420505|ref|NP_568066.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 650

 Score =  206 bits (522), Expect = 3e-051
 Identities = 115/183 (62%), Positives = 135/183 (73%), Gaps = 12/183 (6%)
 Frame = +3

Query:  90 MLRKSVLE----LSIKRFPRNLGAQRFHLSSSRKVSTSGKN---GTNPVGKPDASKVPPP 248
           MLRKSVLE    LSIKRFPRNLGAQRFHLSSSR  STSGKN   G  PVGKPDASKV  P
Sbjct:   1 MLRKSVLELSSRLSIKRFPRNLGAQRFHLSSSRNASTSGKNGLPGAKPVGKPDASKV-DP 59

Query: 249 PPAGKPDGSKGGSAKVFIGGAAIAGAFLLAYQTGYLDQYLGNERQKLSELVKSGSVTEKL 428
           P    P  +KG S+KV IGG AIAGAFL+AYQTGYLDQYLG E+QKLSE + S ++TEKL
Sbjct:  60 PKVTPPPPTKGNSSKVVIGGVAIAGAFLVAYQTGYLDQYLGKEQQKLSERIHSDALTEKL 119

Query: 429 EEVHHSSVEDSAGIGSSVDGKAETQPEL---PAFVGMQSDFVEVQPESDPTPERYTYVSS 599
           EE HH +V       +  DGK ETQP++    A  G+QSD +E+QPESD + +R+TY+SS
Sbjct: 120 EEAHHLNVPSGVEDSTEKDGKVETQPQVTHSEASEGVQSD-IELQPESDLSSDRFTYISS 178

Query: 600 SNQ 608
           + +
Sbjct: 179 NQE 181

>gi|3080438|emb|CAA18755.1| putative protein [Arabidopsis thaliana]

          Length = 693

 Score =  175 bits (442), Expect = 5e-042
 Identities = 95/164 (57%), Positives = 118/164 (71%), Gaps = 8/164 (4%)
 Frame = +3

Query: 135 RNLGAQRFHLSSSRKVSTSGKN---GTNPVGKPDASKVPPPPPAGKPDGSKGGSAKVFIG 305
           R+  ++RFHLSSSR  STSGKN   G  PVGKPDASKV  PP    P  +KG S+KV IG
Sbjct:  40 RDNASERFHLSSSRNASTSGKNGLPGAKPVGKPDASKV-DPPKVTPPPPTKGNSSKVVIG 98

Query: 306 GAAIAGAFLLAYQTGYLDQYLGNERQKLSELVKSGSVTEKLEEVHHSSVEDSAGIGSSVD 485
           G AIAGAFL+AYQTGYLDQYLG E+QKLSE + S ++TEKLEE HH +V       +  D
Sbjct:  99 GVAIAGAFLVAYQTGYLDQYLGKEQQKLSERIHSDALTEKLEEAHHLNVPSGVEDSTEKD 158

Query: 486 GKAETQPEL---PAFVGMQSDFVEVQPESDPTPERYTYVSSSNQ 608
           GK ETQP++    A  G+QSD +E+QPESD + +R+TY+SS+ +
Sbjct: 159 GKVETQPQVTHSEASEGVQSD-IELQPESDLSSDRFTYISSNQE 201

>gi|255576188|ref|XP_002528988.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 638

 Score =  57 bits (135), Expect = 2e-006
 Identities = 37/109 (33%), Positives = 56/109 (51%), Gaps = 11/109 (10%)
 Frame = +3

Query: 222 PDASKVPPPPPAGKPDGSKGGSAKVFIGGAAIAGAFLLAYQTGYLDQYLGNERQKLS--- 392
           P  +  P      KP  SK    KV  G A + GA LLAYQ+GYLDQY+G ++Q  +   
Sbjct:  20 PQQNASPKAGSGSKPPESKSNLPKVVAGSAIVGGAGLLAYQSGYLDQYIGKQQQNSARNG 79

Query: 393 ---ELVKSGSVTEKLEEVHHSSVEDSAGIGSSVD---GKAETQPELPAF 521
              + VK   ++   E++  +  E+S  +G  V+    K +T+ +LP F
Sbjct:  80 IDYKDVKDTQISG--EQLASTISEESVKLGHDVEQTAQKVQTEIDLPQF 126

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 340,739,763,152
Number of Sequences: 15229318
Number of Extensions: 340739763152
Number of Successful Extensions: 126459941
Number of sequences better than 0.0: 0