BLASTX 7.6.2
Query= UN68165 /QuerySize=722
(721 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O14327|PAB2_SCHPO Polyadenylate-binding protein 2 OS=Schizosa... 76 2e-013
sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabae... 60 1e-008
sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabae... 60 1e-008
sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus muscu... 60 1e-008
sp|Q925G0|RBM3_RAT Putative RNA-binding protein 3 OS=Rattus norv... 56 2e-007
sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabae... 55 3e-007
sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapi... 54 7e-007
sp|Q44556|RBPD_ANASP Putative RNA-binding protein rbpD OS=Anabae... 52 3e-006
>sp|O14327|PAB2_SCHPO Polyadenylate-binding protein 2 OS=Schizosaccharomyces
pombe GN=pab2 PE=2 SV=1
Length = 166
Score = 76 bits (186), Expect = 2e-013
Identities = 50/114 (43%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Frame = -3
Query: 557 VFVKGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGT--EKA 384
V+V D S+ +++S HFASCG + RV++ D+ TG +G AY+EF E + A
Sbjct: 57 VYVGNVDYSVTPEELQS----HFASCGSVNRVTILCDKFTGHPKGFAYIEFSEPSLVPNA 112
Query: 383 FELNGSEMGGWNLVVDEPRPKENNSSGRSNYGGGRDSGRGRGRGRGGDNFRGRG 222
LNGS + L V PK N G S G GR GRGRGRGRGG R RG
Sbjct: 113 LLLNGSMLHERPLKV---TPKRTNVPGMSR-GRGRGRGRGRGRGRGGYRGRARG 162
>sp|Q44554|RBPB_ANASP Putative RNA-binding protein rbpB OS=Anabaena sp. (strain
PCC 7120) GN=rbpB PE=3 SV=3
Length = 103
Score = 60 bits (145), Expect = 1e-008
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 3/89 (3%)
Frame = -3
Query: 512 KSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEK--AFE-LNGSEMGGWNLV 342
+ +L+ FA G + RV +PVDRETG RG ++E E+ A E L+G+E G +L
Sbjct: 14 EESLNAVFAEYGSVKRVQLPVDRETGRVRGFGFVEMGSDAEETAAIEALDGAEWMGRDLK 73
Query: 341 VDEPRPKENNSSGRSNYGGGRDSGRGRGR 255
V++ +P+E+ R ++GG R + R R
Sbjct: 74 VNKAKPREDRGGSRGSFGGNRSNNNFRNR 102
>sp|Q9WX39|RBPF_ANASP Putative RNA-binding protein rbpF OS=Anabaena sp. (strain
PCC 7120) GN=rbpF PE=3 SV=3
Length = 105
Score = 60 bits (145), Expect = 1e-008
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Frame = -3
Query: 503 LSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEK--AFE-LNGSEMGGWNLVVDE 333
+S FA G + RV +P DRETG RG A++E E+ A E L+G+E G +L V++
Sbjct: 17 ISNVFAEYGSVKRVVLPTDRETGRLRGFAFVEMGSDAEETAAIEGLDGAEWMGRDLKVNK 76
Query: 332 PRPKENNSSGRSNYGGGRDSGRGRGRGRGGDNF 234
+PKE+ R ++GGG G G G G G +
Sbjct: 77 AKPKED----RGSFGGGNRGGYGGGGGGGRSRY 105
>sp|O89086|RBM3_MOUSE Putative RNA-binding protein 3 OS=Mus musculus GN=Rbm3
PE=1 SV=1
Length = 153
Score = 60 bits (144), Expect = 1e-008
Identities = 46/138 (33%), Positives = 64/138 (46%), Gaps = 6/138 (4%)
Frame = -3
Query: 548 KGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEF---KEGTEKAFE 378
K F L N + AL +HF+S G I+ V V DRET SRG ++ F + ++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDAMRA 66
Query: 377 LNGSEMGGWNLVVDEPRPKENNSSGRSNYGGGRDSGRGRG-RGRGGDNFRGR-GGRGREN 204
+NG + G + VD S G + G GR RG G +G G + R GG G
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGSRGGAFGGRGRSYSRGGGDQGYGSGRYDSRPGGYGYGY 126
Query: 203 GRGRPSFTHSDGKKTTFS 150
GR R ++ S G +S
Sbjct: 127 GRSR-DYSGSQGGYDRYS 143
>sp|Q925G0|RBM3_RAT Putative RNA-binding protein 3 OS=Rattus norvegicus GN=Rbm3
PE=1 SV=2
Length = 155
Score = 56 bits (133), Expect = 2e-007
Identities = 45/140 (32%), Positives = 65/140 (46%), Gaps = 8/140 (5%)
Frame = -3
Query: 548 KGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEF---KEGTEKAFE 378
K F L N + AL +HF+S G I+ V V DRET SRG ++ F + ++
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASDVMRA 66
Query: 377 LNGSEMGGWNLVVDEPRPKENNSSGRS--NYGGGRDSGRGRG-RGRGGDNFRGR-GGRGR 210
+NG + G + VD + G + +G GR RG G +G G + R GG G
Sbjct: 67 MNGESLDGRQIRVDHAGKSARGTRGGAFGAHGRGRSYSRGGGDQGYGSGRYDSRPGGYGY 126
Query: 209 ENGRGRPSFTHSDGKKTTFS 150
GR R ++ S G +S
Sbjct: 127 GYGRSR-DYSGSQGGYDRYS 145
>sp|Q44560|RBPA_ANASP Putative RNA-binding protein rbpA OS=Anabaena sp. (strain
PCC 7120) GN=rbpA PE=3 SV=3
Length = 102
Score = 55 bits (132), Expect = 3e-007
Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Frame = -3
Query: 512 KSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEKAF---ELNGSEMGGWNLV 342
+ LS FA G + RV +P DRETG RG ++E E+A L+G+E G +L
Sbjct: 14 QDTLSAVFAEYGTVKRVQLPTDRETGQPRGFGFVEMGSEAEEAAAIEALDGAEWMGRDLK 73
Query: 341 VDEPRPKENNSSGRSNYGGGRDSGRGRGRGR 249
V++ +P+E+ N GG G G GR R
Sbjct: 74 VNKAKPREDRGPSGGNRGG---YGGGGGRNR 101
>sp|P98179|RBM3_HUMAN Putative RNA-binding protein 3 OS=Homo sapiens GN=RBM3
PE=1 SV=1
Length = 157
Score = 54 bits (129), Expect = 7e-007
Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 15/121 (12%)
Frame = -3
Query: 548 KGFDSSLPVNDIKSALSEHFASCGEITRVSVPVDRETGGSRGIAYLEF---KEGTEKAFE 378
K F L N + AL +HF+S G I+ V V DRET SRG ++ F + +
Sbjct: 7 KLFVGGLNFNTDEQALEDHFSSFGPISEVVVVKDRETQRSRGFGFITFTNPEHASVAMRA 66
Query: 377 LNGSEMGGWNLVVDEPRPKENNSSGRSNYGGGRDS-GRGRGRGRGGDNFRGRGGRGRENG 201
+NG + G + VD S R GGG + GRGR RGG G +G +G
Sbjct: 67 MNGESLDGRQIRVDHA-----GKSARGTRGGGFGAHGRGRSYSRGG------GDQGYGSG 115
Query: 200 R 198
R
Sbjct: 116 R 116
>sp|Q44556|RBPD_ANASP Putative RNA-binding protein rbpD OS=Anabaena sp. (strain
PCC 7120) GN=rbpD PE=3 SV=3
Length = 94
Score = 52 bits (123), Expect = 3e-006
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Frame = -3
Query: 491 FASCGEITRVSVPVDRETGGSRGIAYLEFKEGTEK---AFELNGSEMGGWNLVVDEPRPK 321
FA GE+ RV +P DRETG RG A++E E ++ EL+G+E G L V++ +P+
Sbjct: 21 FADYGEVKRVVLPTDRETGRMRGFAFVEMNEDAQEDAAITELDGAEWMGRQLRVNKAKPR 80
Query: 320 ENNSSG 303
E++ G
Sbjct: 81 EDDRRG 86
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 230,958,350,165
Number of Sequences: 518415
Number of Extensions: 230958350165
Number of Successful Extensions: 1437040323
Number of sequences better than 0.0: 0
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